Guide to the Human Genome
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Name: SAPS2 Sequence: fasta or formatted (932aa) NCBI GI: 37537701
Description:

SAPS domain family, member 2

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         95           2
 C cysteine            2.8         26           2
 D aspartate           7.0         65           3
 E glutamate           7.8         73           2
 F phenylalanine       3.5         33           2
 G glycine             6.0         56           2
 H histidine           2.3         21           1
 I isoleucine          3.3         31           1
 K lysine              3.8         35           3
 L leucine            10.3         96           3
 M methionine          1.8         17           1
 N asparagine          3.6         34           2
 P proline             7.0         65           2
 Q glutamine           4.3         40           2
 R arginine            5.3         49           2
 S serine              7.4         69           4
 T threonine           5.9         55           2
 V valine              6.1         57           2
 W tryptophan          1.1         10           1
 Y tyrosine            0.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SAPS domain family, member 2 
SAPS3                 0.364   SAPS domain family, member 3 
SAPS1                 0.338   SAPS domain family, member 1 
LOC652875             0.036   PREDICTED: similar to SAPS domain family, member 2 ...
SNAP91                0.014   synaptosomal-associated protein, 91kDa homolog 
TNRC18                0.012   trinucleotide repeat containing 18 
KIAA0754              0.011   hypothetical protein LOC643314 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FAM48B1               0.011   hypothetical protein LOC100130302 
NUP214                0.010   nucleoporin 214kDa 
NACA                  0.010   nascent polypeptide-associated complex alpha subuni...
SETD1A                0.010   SET domain containing 1A 
SAMD1                 0.010   sterile alpha motif domain containing 1 
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
TAF4                  0.009   TBP-associated factor 4 
NFATC4                0.009   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.009   nuclear factor of activated T-cells, cytoplasmic, ca...
GNAS                  0.008   GNAS complex locus XLas 
KRTAP4-9              0.008   PREDICTED: keratin associated protein 4-9 
BASP1                 0.008   brain abundant, membrane attached signal protein 1 [...
FLJ22184              0.008   PREDICTED: hypothetical protein LOC80164 
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform b ...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.008   Treacher Collins-Franceschetti syndrome 1 isoform c ...
MUC7                  0.008   mucin 7, secreted precursor 
NCOR2                 0.008   nuclear receptor co-repressor 2 isoform 1 
MUC7                  0.008   mucin 7, secreted precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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