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Search of human proteins with 31791030
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31791030 keratin associated protein 19-1 [Homo sapiens]
(90 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 217 2e-57
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 171 1e-43
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 121 1e-28
gi|149944573 keratin associated protein 19-8 [Homo sapiens] 102 8e-23
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 101 1e-22
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 101 1e-22
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 89 6e-19
gi|31791014 keratin associated protein 20-2 [Homo sapiens] 86 5e-18
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 83 5e-17
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 77 4e-15
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 75 1e-14
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 72 7e-14
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 72 7e-14
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 72 7e-14
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 72 9e-14
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 70 4e-13
gi|31791032 keratin associated protein 19-2 [Homo sapiens] 65 9e-12
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 65 1e-11
gi|119395750 keratin 1 [Homo sapiens] 63 4e-11
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 63 6e-11
gi|109452587 family with sequence similarity 98, member B isofor... 63 6e-11
gi|55956899 keratin 9 [Homo sapiens] 62 1e-10
gi|31791020 keratin associated protein 20-1 [Homo sapiens] 61 2e-10
gi|195972866 keratin 10 [Homo sapiens] 60 5e-10
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... 59 6e-10
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform... 59 6e-10
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 59 8e-10
gi|109148552 keratin 3 [Homo sapiens] 59 1e-09
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 58 1e-09
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 58 1e-09
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 217 bits (552), Expect = 2e-57
Identities = 90/90 (100%), Positives = 90/90 (100%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG
Sbjct: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY
Sbjct: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 171 bits (432), Expect = 1e-43
Identities = 75/90 (83%), Positives = 76/90 (84%), Gaps = 9/90 (10%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
MS+YGSYYGGLGY CGGFGGLGYGYGCGCGSF R GSGCGYGGY GYGSGFG
Sbjct: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGY---------GYGSGFG 51
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
GYGYGSGFGGYGYGC RPSY GGYGFSGFY
Sbjct: 52 GYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 121 bits (303), Expect = 1e-28
Identities = 57/90 (63%), Positives = 60/90 (66%), Gaps = 18/90 (20%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
M++YG+YYGGLGY GGF LGYGYGCGCGSF R G G GYGGYGYGSGFG YGY S
Sbjct: 1 MNYYGNYYGGLGYGYGGFDDLGYGYGCGCGSFRRLGYGGGYGGYGYGSGFGGYGYRS--- 57
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
CRPS GGYGFSGFY
Sbjct: 58 ---------------CRPSCYGGYGFSGFY 72
>gi|149944573 keratin associated protein 19-8 [Homo sapiens]
Length = 63
Score = 102 bits (253), Expect = 8e-23
Identities = 49/90 (54%), Positives = 51/90 (56%), Gaps = 27/90 (30%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
MS+Y SYYGGLGY GGFGG GYGYGCG GSF R G GCGYGGY
Sbjct: 1 MSYYRSYYGGLGYGYGGFGGWGYGYGCGYGSFRRLGYGCGYGGY---------------- 44
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
G+ CCRP Y GGYGFS FY
Sbjct: 45 -----------GFSCCRPLYYGGYGFSAFY 63
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 101 bits (252), Expect = 1e-22
Identities = 49/90 (54%), Positives = 50/90 (55%), Gaps = 27/90 (30%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
MS+ GSYYGGLGY CGGFGGLGYGY CGCGSF R G GCGYGG
Sbjct: 1 MSYSGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLGYGCGYGG----------------- 43
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
Y Y CC PS GGY SGFY
Sbjct: 44 ----------YRYSCCHPSCYGGYWSSGFY 63
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 101 bits (251), Expect = 1e-22
Identities = 45/64 (70%), Positives = 49/64 (76%), Gaps = 5/64 (7%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
MS+YGSYY GLGY CGGFGGLGYGYGCGCGSF R G GCG+GG GYG Y S +G
Sbjct: 1 MSYYGSYYRGLGYGCGGFGGLGYGYGCGCGSFRRLGYGCGFGGNGYG-----YCRPSCYG 55
Query: 61 GYGY 64
GYG+
Sbjct: 56 GYGF 59
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 89.4 bits (220), Expect = 6e-19
Identities = 44/90 (48%), Positives = 46/90 (51%), Gaps = 32/90 (35%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
M +YGSYY GLGY CG GFG GYG G G
Sbjct: 1 MRYYGSYYRGLGYGCG--------------------------------GFGGLGYGCGCG 28
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
GY YGSG+GGY YGCCRPS GYGFSGFY
Sbjct: 29 GYRYGSGYGGYRYGCCRPSCREGYGFSGFY 58
>gi|31791014 keratin associated protein 20-2 [Homo sapiens]
Length = 65
Score = 86.3 bits (212), Expect = 5e-18
Identities = 44/90 (48%), Positives = 49/90 (54%), Gaps = 25/90 (27%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
M +Y +YYGGL Y G+G LG GYGCGCG YG+G G
Sbjct: 1 MCYYSNYYGGLRY---GYGVLGGGYGCGCG----------------------YGHGYGGL 35
Query: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
G GYG G+GGYGYGCCRPS G Y GFY
Sbjct: 36 GCGYGRGYGGYGYGCCRPSCYGRYWSCGFY 65
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 82.8 bits (203), Expect = 5e-17
Identities = 53/88 (60%), Positives = 55/88 (62%), Gaps = 16/88 (18%)
Query: 4 YGSYYG---GLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG-GY--GYGSGFGSYGYGS 57
YGS YG G GYSCG G G GYGCG GS GCGYG GY GYGSG+ S GYGS
Sbjct: 28 YGSSYGCGYGTGYSCGYGCGYGSGYGCGYGS----SYGCGYGTGYSCGYGSGY-SCGYGS 82
Query: 58 GFGGYGYGSGFGGYGYGCCRPSYNGGYG 85
G G GYG+GF G GYGC Y GYG
Sbjct: 83 G-SGCGYGTGF-GCGYGC---GYGTGYG 105
Score = 57.4 bits (137), Expect = 2e-09
Identities = 39/83 (46%), Positives = 45/83 (54%), Gaps = 15/83 (18%)
Query: 15 CGGFGGLGYGYGCGCGSFCRRGSGCGYG-----GYGYGSGFGSYGYGSGFG---GYGYGS 66
C + G GYG G C GSG GYG G GYG+G+ S GYG G+G G GYGS
Sbjct: 2 CCNYYGNSCGYGSSYG--CGYGSGYGYGYGSSYGCGYGTGY-SCGYGCGYGSGYGCGYGS 58
Query: 67 GFG---GYGYGCCRPS-YNGGYG 85
+G G GY C S Y+ GYG
Sbjct: 59 SYGCGYGTGYSCGYGSGYSCGYG 81
Score = 44.3 bits (103), Expect = 2e-05
Identities = 29/62 (46%), Positives = 31/62 (50%), Gaps = 21/62 (33%)
Query: 4 YGSYYG---GLGYSCG---------------GFG-GLGYGYGCGCGS--FCRRGSGCGYG 42
YGS YG G GYSCG G+G G G GYGCG G+ C GSG GY
Sbjct: 56 YGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYGCGCGSGSGYC 115
Query: 43 GY 44
GY
Sbjct: 116 GY 117
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 76.6 bits (187), Expect = 4e-15
Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGG 61
S+Y +Y GG GY C G+GGLG GYG GCG C CGYGG G+G G G G+GG
Sbjct: 11 SYYRNYNGGHGYGCCGYGGLGCGYG-GCGYGC-----CGYGGLGFGYG----GLDCGYGG 60
Query: 62 YGYGSG-FGGYGYGCCRPSYNGGYGF 86
G G G F G GY Y GYG+
Sbjct: 61 LGCGYGSFCGCGYRGLDCGYGCGYGY 86
Score = 71.2 bits (173), Expect = 2e-13
Identities = 41/83 (49%), Positives = 46/83 (55%), Gaps = 20/83 (24%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYG----------CGCGSFCRRGSGCGYGGY--GYGSGFGS 52
G YGG GY C G+GGLG+GYG CG GSFC GCGY G GYG G+G
Sbjct: 31 GCGYGGCGYGCCGYGGLGFGYGGLDCGYGGLGCGYGSFC----GCGYRGLDCGYGCGYGY 86
Query: 53 YGY---GSGFG-GYGYGSGFGGY 71
+ G G+ G GYGS FG Y
Sbjct: 87 VSHSFCGCGYRCGSGYGSSFGYY 109
Score = 46.6 bits (109), Expect = 4e-06
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 17/61 (27%)
Query: 29 CGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNG-GYGFS 87
CGS+ Y Y G G+G GYG G G G+GG GYGCC Y G G+G+
Sbjct: 9 CGSY--------YRNYNGGHGYGCCGYG------GLGCGYGGCGYGCC--GYGGLGFGYG 52
Query: 88 G 88
G
Sbjct: 53 G 53
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 74.7 bits (182), Expect = 1e-14
Identities = 43/83 (51%), Positives = 49/83 (59%), Gaps = 16/83 (19%)
Query: 6 SYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG---GYGYGSGFGSY---GYGSGF 59
+YYG SCG YG GCGCG G GCGYG G GYG GFGS+ GYG+G+
Sbjct: 4 NYYGN---SCG------YGSGCGCGYGSGSGCGCGYGTGYGCGYGCGFGSHYGCGYGTGY 54
Query: 60 G-GYGYGSGFGGYGYGCCRPSYN 81
G GYG GSG+ GY C R Y+
Sbjct: 55 GCGYGSGSGYCGYRPFCFRRCYS 77
Score = 52.8 bits (125), Expect = 6e-08
Identities = 33/64 (51%), Positives = 35/64 (54%), Gaps = 13/64 (20%)
Query: 4 YGS-----YYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSG 58
YGS Y G G CG G G GYGCG GS GCGY G GYG G+GS GSG
Sbjct: 12 YGSGCGCGYGSGSGCGCGYGTGYGCGYGCGFGSH----YGCGY-GTGYGCGYGS---GSG 63
Query: 59 FGGY 62
+ GY
Sbjct: 64 YCGY 67
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 72.4 bits (176), Expect = 7e-14
Identities = 46/89 (51%), Positives = 52/89 (58%), Gaps = 16/89 (17%)
Query: 6 SYYGG-LGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG-GY--GYGSGFGSYGYGSGFGG 61
+YYG GY C G G GYGCG GS GCGYG GY GYGSG G GYG+G+ G
Sbjct: 4 NYYGNSCGYGCSYGCGYGSGYGCGYGS----SYGCGYGTGYSCGYGSGSGC-GYGTGY-G 57
Query: 62 YGYGSGFG-GYGYGCCRPSYNGGYGFSGF 89
GYG G+G GYG GC G G+ G+
Sbjct: 58 CGYGCGYGTGYGCGC-----GSGSGYCGY 81
Score = 71.2 bits (173), Expect = 2e-13
Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 4 YGSYYG---GLGYSCG---GFG-GLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYG 56
YG YG G GY CG +G G G GY CG GS GSGCGY G GYG G+G GYG
Sbjct: 12 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGY-GTGYGCGYGC-GYG 65
Query: 57 SGFG-GYGYGSGFGGYGYGCCRPSYN 81
+G+G G G GSG+ GY C R Y+
Sbjct: 66 TGYGCGCGSGSGYCGYRPFCFRRCYS 91
Score = 65.5 bits (158), Expect = 9e-12
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 15 CGGFGGLGYGYGCGCGSFCRRGSGCGYG---GYGYGSGFGSYGYGSGFG---GYGYGSGF 68
C + G GYGC G G GCGYG G GYG+G+ S GYGSG G G GYG G+
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGY-SCGYGSGSGCGYGTGYGCGY 60
Query: 69 G---GYGYGCCRPSYNGGYGFSGF 89
G G GYGC S +G G+ F
Sbjct: 61 GCGYGTGYGCGCGSGSGYCGYRPF 84
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 72.4 bits (176), Expect = 7e-14
Identities = 46/89 (51%), Positives = 52/89 (58%), Gaps = 16/89 (17%)
Query: 6 SYYGG-LGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG-GY--GYGSGFGSYGYGSGFGG 61
+YYG GY C G G GYGCG GS GCGYG GY GYGSG G GYG+G+ G
Sbjct: 4 NYYGNSCGYGCSYGCGYGSGYGCGYGS----SYGCGYGTGYSCGYGSGSGC-GYGTGY-G 57
Query: 62 YGYGSGFG-GYGYGCCRPSYNGGYGFSGF 89
GYG G+G GYG GC G G+ G+
Sbjct: 58 CGYGCGYGTGYGCGC-----GSGSGYCGY 81
Score = 71.2 bits (173), Expect = 2e-13
Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 4 YGSYYG---GLGYSCG---GFG-GLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYG 56
YG YG G GY CG +G G G GY CG GS GSGCGY G GYG G+G GYG
Sbjct: 12 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGY-GTGYGCGYGC-GYG 65
Query: 57 SGFG-GYGYGSGFGGYGYGCCRPSYN 81
+G+G G G GSG+ GY C R Y+
Sbjct: 66 TGYGCGCGSGSGYCGYRPFCFRRCYS 91
Score = 65.5 bits (158), Expect = 9e-12
Identities = 40/84 (47%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 15 CGGFGGLGYGYGCGCGSFCRRGSGCGYG---GYGYGSGFGSYGYGSGFG---GYGYGSGF 68
C + G GYGC G G GCGYG G GYG+G+ S GYGSG G G GYG G+
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGY-SCGYGSGSGCGYGTGYGCGY 60
Query: 69 G---GYGYGCCRPSYNGGYGFSGF 89
G G GYGC S +G G+ F
Sbjct: 61 GCGYGTGYGCGCGSGSGYCGYRPF 84
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 72.4 bits (176), Expect = 7e-14
Identities = 46/89 (51%), Positives = 52/89 (58%), Gaps = 16/89 (17%)
Query: 6 SYYGG-LGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG-GY--GYGSGFGSYGYGSGFGG 61
+YYG GY C G G GYGCG GS GCGYG GY GYGSG G GYG+G+ G
Sbjct: 34 NYYGNSCGYGCSYGCGYGSGYGCGYGS----SYGCGYGTGYSCGYGSGSGC-GYGTGY-G 87
Query: 62 YGYGSGFG-GYGYGCCRPSYNGGYGFSGF 89
GYG G+G GYG GC G G+ G+
Sbjct: 88 CGYGCGYGTGYGCGC-----GSGSGYCGY 111
Score = 71.2 bits (173), Expect = 2e-13
Identities = 45/86 (52%), Positives = 51/86 (59%), Gaps = 14/86 (16%)
Query: 4 YGSYYG---GLGYSCG---GFG-GLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYG 56
YG YG G GY CG +G G G GY CG GS GSGCGY G GYG G+G GYG
Sbjct: 42 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGY-GTGYGCGYGC-GYG 95
Query: 57 SGFG-GYGYGSGFGGYGYGCCRPSYN 81
+G+G G G GSG+ GY C R Y+
Sbjct: 96 TGYGCGCGSGSGYCGYRPFCFRRCYS 121
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 72.0 bits (175), Expect = 9e-14
Identities = 42/77 (54%), Positives = 46/77 (59%), Gaps = 14/77 (18%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGY---GCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGS- 57
S+YG+YYG GY G+GGLGYGY GCG GS C GCG+ G G YGYGS
Sbjct: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCC----GCGFRRLGCG-----YGYGSR 54
Query: 58 GFGGYGYGSGFG-GYGY 73
GYGYG G G GY Y
Sbjct: 55 SLCGYGYGCGSGSGYYY 71
Score = 40.8 bits (94), Expect = 2e-04
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 43 GYGYGSGFGSYGYG-SGFGGYGYGSGFGGYGYG-CCRPSYNG---GYGF 86
G YG+ +G+ GYG G+GG GYG G G GYG CC + GYG+
Sbjct: 3 GSYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGY 51
Score = 37.7 bits (86), Expect = 0.002
Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 25/78 (32%)
Query: 29 CGSFCRRGSGCGYGGYGYGSGFGSYGYGS-GFGGYGYGSGFG------------GYGYG- 74
CGS+ YG Y G+G GYG G+G G G G+G GYGYG
Sbjct: 2 CGSY--------YGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGYGS 53
Query: 75 --CCRPSYNGGYGFSGFY 90
C Y G G SG+Y
Sbjct: 54 RSLCGYGYGCGSG-SGYY 70
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 70.1 bits (170), Expect = 4e-13
Identities = 42/85 (49%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYG-GYGYGSGFGSYGYGSGFG 60
++Y + GG GY G G GYG G GCG GSGC YG GYG G G+G GYGSG G
Sbjct: 4 NYYRNCCGGCGYGSGWSSGCGYGCGYGCG----YGSGCRYGSGYGTGCGYGC-GYGSGCG 58
Query: 61 -GYGYGSGFGGYGYGCCRPSYNGGY 84
G GY S GY C R Y+ Y
Sbjct: 59 YGCGYSSSCCGYRPLCYRRCYSSCY 83
>gi|31791032 keratin associated protein 19-2 [Homo sapiens]
Length = 52
Score = 65.5 bits (158), Expect = 9e-12
Identities = 33/68 (48%), Positives = 34/68 (50%), Gaps = 18/68 (26%)
Query: 23 YGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNG 82
YGYGCGCGSFCR G GCGY G YG G G G GCC PS
Sbjct: 3 YGYGCGCGSFCRLGYGCGY------------------EGCRYGCGHRGCGDGCCCPSCYR 44
Query: 83 GYGFSGFY 90
Y F+GFY
Sbjct: 45 RYRFTGFY 52
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 64.7 bits (156), Expect = 1e-11
Identities = 36/70 (51%), Positives = 40/70 (57%), Gaps = 12/70 (17%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGG 61
S+YG+YYG GY C G+ GLGYGYG C S CGY G+GYGS F F G
Sbjct: 4 SYYGNYYGDHGYGCCGYEGLGYGYG---SLRCGYSSCCGY-GHGYGSRF--------FCG 51
Query: 62 YGYGSGFGGY 71
GYG G G Y
Sbjct: 52 CGYGCGSGYY 61
Score = 35.0 bits (79), Expect = 0.013
Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 24/63 (38%)
Query: 29 CGSFCRRGSGCGYGGYGYGSGFG-------SYGYGSGFGGY----GYGSGFG-----GYG 72
CGS+ YG Y G+G YGYGS GY GYG G+G G G
Sbjct: 2 CGSY--------YGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCGYGHGYGSRFFCGCG 53
Query: 73 YGC 75
YGC
Sbjct: 54 YGC 56
Score = 32.3 bits (72), Expect = 0.082
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Query: 51 GSYGYGSGFGGYGYGS-GFGG--YGYGCCRPSYNG--GYG 85
GSY YG+ +G +GYG G+ G YGYG R Y+ GYG
Sbjct: 3 GSY-YGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCGYG 41
Score = 31.2 bits (69), Expect = 0.18
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 10/46 (21%)
Query: 47 GSGFGSYGYGSGFG-------GYGYGSGFGGYGYGCCRPSYNGGYG 85
GS +G+Y G+G GYGYGS GY CC Y GYG
Sbjct: 3 GSYYGNYYGDHGYGCCGYEGLGYGYGSLRCGYS-SCC--GYGHGYG 45
Score = 31.2 bits (69), Expect = 0.18
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
Query: 61 GYGYGSGFGGYGYGCCRPSYNG-GYGF 86
G YG+ +G +GYGCC Y G GYG+
Sbjct: 3 GSYYGNYYGDHGYGCC--GYEGLGYGY 27
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 63.2 bits (152), Expect = 4e-11
Identities = 42/81 (51%), Positives = 46/81 (56%), Gaps = 23/81 (28%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
GS +GG GY GGFGG G+G G G G GG G G GFG G+GSG GG+G
Sbjct: 87 GSGFGG-GYGGGGFGGGGFG-----------GGGFGGGGIG-GGGFG--GFGSGGGGFG- 130
Query: 65 GSGFGGYGYGCCRPSYNGGYG 85
G GFGG GYG GGYG
Sbjct: 131 GGGFGGGGYG-------GGYG 144
Score = 62.8 bits (151), Expect = 6e-11
Identities = 34/69 (49%), Positives = 41/69 (59%), Gaps = 13/69 (18%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYG-YGSGFGSYGYGSGFG 60
S +G YGG G+ GGFGG G+G G G G GG+G +GSG G +G G GFG
Sbjct: 88 SGFGGGYGGGGFGGGGFGGGGFG-----------GGGIGGGGFGGFGSGGGGFG-GGGFG 135
Query: 61 GYGYGSGFG 69
G GYG G+G
Sbjct: 136 GGGYGGGYG 144
Score = 62.8 bits (151), Expect = 6e-11
Identities = 44/85 (51%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 9 GGLGYSCGG--FGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGG---YG 63
GG GY GG +G G YG G G RGS G GG YGSG GSYG G G GG YG
Sbjct: 521 GGGGYGSGGSSYGSGGGSYGSGGGGGGGRGS-YGSGGSSYGSGGGSYGSGGGGGGHGSYG 579
Query: 64 YGSGFGGYGYGCCRPSYNGGYGFSG 88
GS GGY G S GG G SG
Sbjct: 580 SGSSSGGYRGG----SGGGGGGSSG 600
Score = 62.4 bits (150), Expect = 7e-11
Identities = 37/81 (45%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSG-FGGYGYGSG 67
G G GG+G G YG G GS+ G G G G YGSG SYG G G +G G G G
Sbjct: 516 GSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRG-SYGSGGSSYGSGGGSYGSGGGGGG 574
Query: 68 FGGYGYGCCRPSYNGGYGFSG 88
G YG G Y GG G G
Sbjct: 575 HGSYGSGSSSGGYRGGSGGGG 595
Score = 59.3 bits (142), Expect = 6e-10
Identities = 43/93 (46%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 2 SHYGSYYGGLGYSCGGFGGLG-YG-----YGCGCGSFCRRGSGCGYGGYGYGSGFGSYGY 55
S YGS G G GG GG G YG YG G GS+ G G G+G YG GS G Y
Sbjct: 530 SSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRG 589
Query: 56 GSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSG 88
GSG GG G SG G G G S G SG
Sbjct: 590 GSG-GGGGGSSGGRGSGGGSSGGSIGGRGSSSG 621
Score = 57.4 bits (137), Expect = 2e-09
Identities = 45/100 (45%), Positives = 48/100 (48%), Gaps = 27/100 (27%)
Query: 9 GGLGYSCGGFGG-LGYGYGCGCGSFCR----------------RGSGCGYGGYGYGSGFG 51
GG SCGG GG G G G G S RGSG G GGYG G GFG
Sbjct: 43 GGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFG-GGYG-GGGFG 100
Query: 52 SYGY-GSGFGGYGY-GSGFGGYGYGCCRPSYNGGYGFSGF 89
G+ G GFGG G G GFGG+G G GG+G GF
Sbjct: 101 GGGFGGGGFGGGGIGGGGFGGFGSG------GGGFGGGGF 134
Score = 45.1 bits (105), Expect = 1e-05
Identities = 38/107 (35%), Positives = 42/107 (39%), Gaps = 27/107 (25%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG- 60
S Y G G+S G G + Y S R G G G G G GS+G G GFG
Sbjct: 6 SSRSGYRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFS-SCGGGGGSFGAGGGFGS 64
Query: 61 ------------------GYGYGSGFGGYGYGCCRPSYNGGYGFSGF 89
G G GSGFGG GYG GG+G GF
Sbjct: 65 RSLVNLGGSKSISISVARGGGRGSGFGG-GYG------GGGFGGGGF 104
Score = 29.3 bits (64), Expect = 0.69
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Query: 52 SYGYGSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSG 88
S G G GG GYGSG YG G G YG G
Sbjct: 513 SGGGSRGGGGGGYGSGGSSYGSG------GGSYGSGG 543
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 62.8 bits (151), Expect = 6e-11
Identities = 41/84 (48%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
GSY GG G GFGG G YG G G + RG G G GG GYG+ G YG G G+ GY
Sbjct: 258 GSYGGGDG-GYNGFGGDGGNYGGGPG-YSSRG-GYGGGGPGYGNQGGGYGGGGGYDGYNE 314
Query: 65 GSGFGGYGYGCCRPSYNGGYGFSG 88
G FGG YG +YN +SG
Sbjct: 315 GGNFGGGNYG-GGGNYNDFGNYSG 337
Score = 61.6 bits (148), Expect = 1e-10
Identities = 38/82 (46%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 10 GLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGY-GYGSGF 68
G G G F G G +G G G+F R G+ G GGYG G G YG G GGY G+G
Sbjct: 215 GRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDG 274
Query: 69 GGYGYGCCRPSYN--GGYGFSG 88
G YG G P Y+ GGYG G
Sbjct: 275 GNYGGG---PGYSSRGGYGGGG 293
Score = 59.7 bits (143), Expect = 5e-10
Identities = 38/84 (45%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
G +GG G GG GG YG G G + G G G YG G G+ S G G G GG GY
Sbjct: 240 GGNFGGRGGYGGGGGGSRGSYGGGDGGY--NGFGGDGGNYGGGPGYSSRG-GYGGGGPGY 296
Query: 65 GSGFGGYGYGCCRPSYNGGYGFSG 88
G+ GGYG G YN G F G
Sbjct: 297 GNQGGGYGGGGGYDGYNEGGNFGG 320
Score = 58.9 bits (141), Expect = 8e-10
Identities = 44/93 (47%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 1 MSHYGSYYGGLG-YSCGG-FGGLGYGYGCGCGSFCRRGS-GCGYGGY-GYGSGFGSYGYG 56
M G++ GG G + GG FGG G GYG G G RGS G G GGY G+G G+YG G
Sbjct: 224 MGRGGNFGGGGGNFGRGGNFGGRG-GYGGGGGG--SRGSYGGGDGGYNGFGGDGGNYGGG 280
Query: 57 SGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGF 89
G+ G G G GG GYG Y GG G+ G+
Sbjct: 281 PGYSSRG-GYGGGGPGYGNQGGGYGGGGGYDGY 312
Score = 57.0 bits (136), Expect = 3e-09
Identities = 41/106 (38%), Positives = 44/106 (41%), Gaps = 36/106 (33%)
Query: 5 GSYYGGLGYSC-GGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSG----- 58
G+Y GG GYS GG+GG G GYG G + G G GY GY G FG YG G
Sbjct: 275 GNYGGGPGYSSRGGYGGGGPGYGNQGGGY---GGGGGYDGYNEGGNFGGGNYGGGGNYND 331
Query: 59 FGGY---------------------------GYGSGFGGYGYGCCR 77
FG Y GYGSG G GYG R
Sbjct: 332 FGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGYGSRR 377
Score = 43.5 bits (101), Expect = 4e-05
Identities = 39/98 (39%), Positives = 44/98 (44%), Gaps = 20/98 (20%)
Query: 4 YGSYYGGLGYSCGGFGGLG--YGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG------- 54
YG G G GG+GG G GY G G+F G YGG G + FG+Y
Sbjct: 289 YGGGGPGYGNQGGGYGGGGGYDGYNEG-GNF----GGGNYGGGGNYNDFGNYSGQQQSNY 343
Query: 55 ---YGSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGF 89
G FGG GS +GG GYG S GGYG F
Sbjct: 344 GPMKGGSFGGRSSGSPYGG-GYGSGGGS--GGYGSRRF 378
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 62.8 bits (151), Expect = 6e-11
Identities = 35/71 (49%), Positives = 38/71 (53%)
Query: 4 YGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYG 63
+G GG G GG GG G G G G G F RG G GGYG G+G GYG +GG G
Sbjct: 359 WGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGG 418
Query: 64 YGSGFGGYGYG 74
G G GG G G
Sbjct: 419 GGGGGGGGGGG 429
Score = 57.8 bits (138), Expect = 2e-09
Identities = 37/80 (46%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGF 68
GG G GG+GG G G+G G G G G G GG G GF G G GGYG G+
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGG----GGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGY 405
Query: 69 GGYGYGCCRPSYNGGYGFSG 88
GG GYG Y GG G G
Sbjct: 406 GGRGYG---DPYGGGGGGGG 422
Score = 55.1 bits (131), Expect = 1e-08
Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGF 68
GG G+ GG GG G+G G G G RG G G YG G G YG G+GG GYG +
Sbjct: 362 GGGGWGGGGGGGGGWGGGGGGG----RGGFQGRGDYG---GRGGYGGRGGYGGRGYGDPY 414
Query: 69 GGYGYGCCRPSYNGGY 84
GG G G GGY
Sbjct: 415 GGGGGGGGGGGGGGGY 430
Score = 50.4 bits (119), Expect = 3e-07
Identities = 35/76 (46%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 17 GFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFGGYGYGCC 76
G GG G G+G G G R G G G G G+G G G +G G G GG G G GG G
Sbjct: 331 GGGGRG-GWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQG 389
Query: 77 RPSY--NGGYGFSGFY 90
R Y GGYG G Y
Sbjct: 390 RGDYGGRGGYGGRGGY 405
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 34 RRGSGCGYGGYGYGSGFGSYGYGSGFGGY-GYGSGFGGYGYGCCRPSYNGGYGFSG 88
R+ G G GG+G G G G G G G GG G+G G GG+G G GG+G G
Sbjct: 328 RQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGG---GGGGGGWGGGG 380
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 62.0 bits (149), Expect = 1e-10
Identities = 44/86 (51%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 5 GSY-YGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGS-YGYGSGFGGY 62
GSY G G S G +GG G G G G GS R GSG YGG G GSG GS GYG G GG
Sbjct: 483 GSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG-GSGSGGGSGGGYGGGSGG- 540
Query: 63 GYGSGFGGYGYGCCRPSYNGGYGFSG 88
G+ G GG G +Y GG G G
Sbjct: 541 GHSGGSGGGHSGGSGGNYGGGSGSGG 566
Score = 59.7 bits (143), Expect = 5e-10
Identities = 39/84 (46%), Positives = 43/84 (51%), Gaps = 15/84 (17%)
Query: 9 GGLGYSCGGFGGLGYG---YGCGCGSFCRRGSGCGYGGY----GYGSGFGSYGYGSGFGG 61
G GYS GG G G+ G G G R G GGY G+G GFG G G GFGG
Sbjct: 67 GSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGG-GSGGGFGG 125
Query: 62 YGYGSGFGGYGYGCCRPSYNGGYG 85
GYGSGFGG+G + GG G
Sbjct: 126 -GYGSGFGGFG------GFGGGAG 142
Score = 57.4 bits (137), Expect = 2e-09
Identities = 47/96 (48%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
Query: 5 GSYYGGLGY---SCGGFGG-LGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGS---YGYGS 57
GSY GG G S GG+GG G G+ G G GSG YGG G GSG GS YG GS
Sbjct: 518 GSYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGG-GSGSGGGSGGGYGGGS 576
Query: 58 GF-----GGYGYGSGFGGYGYGCCRPSYNGGYGFSG 88
G G +G GSGFGG G SY GG SG
Sbjct: 577 GSRGGSGGSHGGGSGFGGESGG----SYGGGEEASG 608
Score = 56.2 bits (134), Expect = 5e-09
Identities = 38/74 (51%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 4 YGSYYGGLGYSC----GGFGG--LGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGS 57
YG GG G+S GGFGG G+G G G G G G+GG G G GFG GYGS
Sbjct: 73 YGGGSGG-GFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGG-GSGGGFGG-GYGS 129
Query: 58 GFGGY-GYGSGFGG 70
GFGG+ G+G G GG
Sbjct: 130 GFGGFGGFGGGAGG 143
Score = 55.1 bits (131), Expect = 1e-08
Identities = 43/99 (43%), Positives = 47/99 (47%), Gaps = 19/99 (19%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGY-------------GGYGYGSGFG 51
G GG G G GG G YG G GS GSG GY GG+ GSG G
Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGS--GGGSGGGYGGGSGGGHSGGSGGGHSGGSG-G 556
Query: 52 SYGYGSGFGGYGYGSGFGG--YGYGCCRPSYNGGYGFSG 88
+YG GSG GG G G G+GG G S+ GG GF G
Sbjct: 557 NYGGGSGSGG-GSGGGYGGGSGSRGGSGGSHGGGSGFGG 594
Score = 55.1 bits (131), Expect = 1e-08
Identities = 41/86 (47%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
G Y GG G G G G+ G G GSG G GG GYG G GS G GSG G +G
Sbjct: 532 GGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGG-GYGGGSGSRG-GSG-GSHGG 588
Query: 65 GSGFGG-----YGYGCCRPSYNGGYG 85
GSGFGG YG G GGYG
Sbjct: 589 GSGFGGESGGSYGGGEEASGSGGGYG 614
Score = 53.5 bits (127), Expect = 3e-08
Identities = 43/89 (48%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 5 GSYYGGLGYSCGGF-GGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGF-----GSYGYGSG 58
GS G G S GG GG G YG G GS G G G GGYG GSG GS+G GSG
Sbjct: 537 GSGGGHSGGSGGGHSGGSGGNYGGGSGS----GGGSG-GGYGGGSGSRGGSGGSHGGGSG 591
Query: 59 FGGYGYGSGFGGYGYGCCRPSYNGGYGFS 87
FGG GS GG Y GG G S
Sbjct: 592 FGGESGGSYGGGEEASGSGGGYGGGSGKS 620
Score = 53.1 bits (126), Expect = 4e-08
Identities = 35/79 (44%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 3 HYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGY 62
H G G G G GG G GYG G GS R GSG G +G GSGFG GS GG
Sbjct: 550 HSGGSGGNYGGGSGSGGGSGGGYGGGSGS--RGGSG---GSHGGGSGFGGESGGSYGGGE 604
Query: 63 GYGSGFGGYGYGCCRPSYN 81
GGYG G + S++
Sbjct: 605 EASGSGGGYGGGSGKSSHS 623
Score = 52.8 bits (125), Expect = 6e-08
Identities = 39/105 (37%), Positives = 43/105 (40%), Gaps = 21/105 (20%)
Query: 6 SYYGGLGYSCGGFGGLGY----GYGCGCGSFCRRGSGCGYG---GYGYGSGFGSYGYGSG 58
S Y S GG GG + GYG G C RG G +G G G G GF + G G
Sbjct: 30 SSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGG 89
Query: 59 F------------GGYGYGSGFGGYGYGCCRPSYNGGY--GFSGF 89
F GGY GFGG G + GGY GF GF
Sbjct: 90 FGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGF 134
Score = 52.8 bits (125), Expect = 6e-08
Identities = 34/65 (52%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 9 GGLGYSCGGFGGL---GYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYG 65
GG G GFGG GY G G GSG G+GG GYGSGFG +G GFGG G G
Sbjct: 88 GGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGG-GYGSGFGGFG---GFGG-GAG 142
Query: 66 SGFGG 70
G GG
Sbjct: 143 GGDGG 147
Score = 52.8 bits (125), Expect = 6e-08
Identities = 37/84 (44%), Positives = 40/84 (47%), Gaps = 18/84 (21%)
Query: 16 GGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFG-----------SYGYGSGFG---G 61
GG GG G YG G R GSG YGG G G G+G SYG GSG G G
Sbjct: 476 GGRGGSGGSYGRGS----RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSG 531
Query: 62 YGYGSGFGGYGYGCCRPSYNGGYG 85
GYG G GG G ++GG G
Sbjct: 532 GGYGGGSGGGHSGGSGGGHSGGSG 555
Score = 50.1 bits (118), Expect = 4e-07
Identities = 29/61 (47%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG-YGSGFG 60
S G +GG GG G GY G G GSG G+GG GYGSGFG +G +G G G
Sbjct: 84 SSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGG-GYGSGFGGFGGFGGGAG 142
Query: 61 G 61
G
Sbjct: 143 G 143
Score = 45.1 bits (105), Expect = 1e-05
Identities = 31/76 (40%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Query: 13 YSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFGGYG 72
+ G G +G G R GSG YG G GSYG G GGYG GSG G
Sbjct: 465 FESSGAGKIGLGG--------RGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGS 516
Query: 73 YGCCRPSYNGGYGFSG 88
G SY GG G G
Sbjct: 517 GG----SYGGGSGSGG 528
Score = 43.5 bits (101), Expect = 4e-05
Identities = 38/93 (40%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGS---- 57
S Y S GG GG GGLG G G S+ R S G GG G S YG GS
Sbjct: 8 SSYLSRSGG-----GGGGGLGSG-GSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVC 61
Query: 58 -----GFGGYGYGSGFGGYGYGCCRPSYNGGYG 85
G GY YG G GG G S GG+G
Sbjct: 62 GRGGGGSFGYSYGGGSGG---GFSASSLGGGFG 91
Score = 38.1 bits (87), Expect = 0.001
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 31 SFCRRGSGCGYGGYGYG-------SGFGSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNGG 83
S+ R G G GG G G S F S G G G G + SG+GG C G
Sbjct: 9 SYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGS 68
Query: 84 YGFS 87
+G+S
Sbjct: 69 FGYS 72
Score = 35.4 bits (80), Expect = 0.010
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG 54
S G + GG G GG G GYG G G G+GG+G G+G G G
Sbjct: 106 SSSGGFGGGFGGGSGGGFGGGYGSGFG-----------GFGGFGGGAGGGDGG 147
>gi|31791020 keratin associated protein 20-1 [Homo sapiens]
Length = 56
Score = 61.2 bits (147), Expect = 2e-10
Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 14/66 (21%)
Query: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGY-GYGSGF---GSYGYG 56
M +Y +YYGG GY GGLG GYGCG RG GCGYGGY GYG+G+ YG
Sbjct: 1 MIYYSNYYGGYGY-----GGLGCGYGCG-----YRGYGCGYGGYGGYGNGYYCPSCYGRY 50
Query: 57 SGFGGY 62
+G Y
Sbjct: 51 WSYGFY 56
Score = 38.9 bits (89), Expect = 9e-04
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 6/45 (13%)
Query: 46 YGSGFGSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
Y + +G YGYG G G G G G GYGC Y GGYG +G+Y
Sbjct: 4 YSNYYGGYGYG----GLGCGYGCGYRGYGCGYGGY-GGYG-NGYY 42
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 59.7 bits (143), Expect = 5e-10
Identities = 39/84 (46%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
GS+ GG G G G G G+G G G G G G G G GS G YG GS GG+G
Sbjct: 467 GSFGGGYGGGSSGGGSSGGGHGGGHGG--SSGGGYGGGSSGGGSSGGGYGGGSSSGGHG- 523
Query: 65 GSGFGGYGYGCCRPSYNGGYGFSG 88
GS GGYG G S GG G+ G
Sbjct: 524 GSSSGGYGGG---SSGGGGGGYGG 544
Score = 58.5 bits (140), Expect = 1e-09
Identities = 39/78 (50%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGG-YGYGSGFGSYGYGSGFGGYGYGSG 67
GG G G FGG GYG G G G G G+GG G G G GS G GS GGYG GS
Sbjct: 460 GGGGRGGGSFGG-GYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSS 518
Query: 68 FGGYGYGCCRPSYNGGYG 85
GG+G S +GGYG
Sbjct: 519 SGGHG-----GSSSGGYG 531
Score = 57.4 bits (137), Expect = 2e-09
Identities = 39/87 (44%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
GS GG G GG G GYG G G G GGYG GS G +G GS GGYG
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGSS-------GGGSSGGGYGGGSSSGGHG-GSSSGGYGG 532
Query: 65 GS---GFGGYGYGCCRPSYNGGYGFSG 88
GS G GGYG G + G G+ G
Sbjct: 533 GSSGGGGGGYGGGSSGGGSSSGGGYGG 559
Score = 54.7 bits (130), Expect = 2e-08
Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 5 GSYYGG-LGYSCGGFGGLG-YGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSG-FGG 61
GS GG G S GG+GGLG +G G GS+ G YGG G FG +G G FGG
Sbjct: 60 GSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGG 119
Query: 62 YGYG-SGFGGYGYGCCRPSYNGGYGFSG 88
G+G GFGG G+G GG+G G
Sbjct: 120 GGFGGGGFGG-GFG-------GGFGGDG 139
Score = 54.7 bits (130), Expect = 2e-08
Identities = 40/83 (48%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 3 HYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYG-SGFGSYGYGSGFGG 61
H GS GG G G G G GYG G S GS G GYG G SG G GYG G G
Sbjct: 491 HGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG--GYGGGSSGGGGGGYGGGSSG 548
Query: 62 YGYGSGFGGYGYGCCRPSYNGGY 84
G SG GGYG G S +GG+
Sbjct: 549 GGSSSG-GGYGGG----SSSGGH 566
Score = 53.1 bits (126), Expect = 4e-08
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 10 GLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGG---YGYGSGFGSYG---YGSGFGGYG 63
G G+S GGF G + G G C GS GYGG +G GS GSYG +G +GG
Sbjct: 44 GGGFSSGGFSGGSFSRGSSGGG-CFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSF 102
Query: 64 YGSGFGGYGYGCCRPSYNGGYGFSG 88
G FGG +G S+ GG GF G
Sbjct: 103 GGGSFGGGSFG--GGSFGGG-GFGG 124
Score = 49.3 bits (116), Expect = 6e-07
Identities = 40/105 (38%), Positives = 44/105 (41%), Gaps = 25/105 (23%)
Query: 3 HYGSYY---GGLGYSCGGFGG------------LGYGYGCGC---GSFCRRGSGCGYGGY 44
HY S GG G CGG GG LG G+ G GSF R SG G
Sbjct: 10 HYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGC--- 66
Query: 45 GYGSGFGSYGYGSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGF 89
+G G YG G GG+G GS G YG SY G +G F
Sbjct: 67 -FGGSSGGYG---GLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSF 107
Score = 40.8 bits (94), Expect = 2e-04
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 14/62 (22%)
Query: 2 SHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGG 61
S +G YGG + G FGG +G G G GG+G G GFG G+G GFGG
Sbjct: 92 SSFGGSYGG-SFGGGSFGGGSFG-----------GGSFGGGGFG-GGGFGG-GFGGGFGG 137
Query: 62 YG 63
G
Sbjct: 138 DG 139
Score = 38.9 bits (89), Expect = 9e-04
Identities = 32/62 (51%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 28 GCGSFCRRGSGCGYGGYGYG---SGFGSYGYGSGFGGYGYGSGFGGYGYGCC-RPSYNGG 83
G GS G G G G GYG SG GS G G G GG+G GS GGYG G S GG
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHG-GGHG-GSSGGGYGGGSSGGGSSGGG 512
Query: 84 YG 85
YG
Sbjct: 513 YG 514
Score = 27.3 bits (59), Expect = 2.6
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 45 GYGSGFGSYGYGSGF-GGYGYGSGFGGYGYGCCRPSYNGGYGFS 87
G GS G G F GGYG GS GG G + GG+G S
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGG----GHGGGHGGS 494
Score = 25.4 bits (54), Expect = 10.0
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 9 GGLGYSCGGFGG---LGYGYGCGCGSFCRRGSGCGYGGYGYGSG 49
GG GY G GG G GYG G S + S G G G
Sbjct: 538 GGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
B1 [Homo sapiens]
Length = 353
Score = 59.3 bits (142), Expect = 6e-10
Identities = 38/82 (46%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 10 GLGYSCGGFGGLGYGYGC-------GCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGY 62
G G S GG G G G G G GS RG G GY GYG G G G++G G+GG
Sbjct: 208 GFGDSRGGGGNFGPGPGSNFRGGSDGYGS--GRGFGDGYNGYGGGPGGGNFGGSPGYGGG 265
Query: 63 GYGSGFGGYGYGCCRPSYNGGY 84
G G GG GYG Y GGY
Sbjct: 266 RGGYGGGGPGYGNQGGGYGGGY 287
Score = 51.6 bits (122), Expect = 1e-07
Identities = 44/110 (40%), Positives = 49/110 (44%), Gaps = 26/110 (23%)
Query: 4 YGSYYGGLGYSCGG--FGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG---YGSG 58
+G Y G G GG FGG GYG G G + G G G G GYG G+ +YG YGSG
Sbjct: 240 FGDGYNGYGGGPGGGNFGG-SPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSG 298
Query: 59 ----FGGY-----GYG----SGFGG-------YGYGCCRPSYNGGYGFSG 88
FG Y YG FGG YG G P +GG G G
Sbjct: 299 NYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYG 348
Score = 47.8 bits (112), Expect = 2e-06
Identities = 38/84 (45%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 9 GGLGYSCG-GFGGLGYGYGCGCGSFCRRGSGCGYGGY-GYGSGFGSYGYGSGFGGYGYGS 66
G GY G GFG GYG G G G +GG GYG G G Y G GG GYG+
Sbjct: 230 GSDGYGSGRGFGDGYNGYGGGPG-------GGNFGGSPGYGGGRGGY----GGGGPGYGN 278
Query: 67 GFGGYGYGCCRPSYNGGYGFSGFY 90
GGYG G +Y GG SG Y
Sbjct: 279 QGGGYGGG--YDNYGGGNYGSGNY 300
Score = 47.4 bits (111), Expect = 2e-06
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 16 GGFGGLGYGYGCGCGSFCRRGSGCGY--GGYGYGSGFGSYGYGSGFGGYGYGSGFGGY-- 71
G G G+G G G G G + G GYGSG G+G G+ GYG G G G +
Sbjct: 202 GRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSG---RGFGDGYNGYGGGPGGGNFGG 258
Query: 72 --GYGCCRPSYNG---GYGFSG 88
GYG R Y G GYG G
Sbjct: 259 SPGYGGGRGGYGGGGPGYGNQG 280
Score = 34.7 bits (78), Expect = 0.016
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 14/65 (21%)
Query: 37 SGCGYGGYGYGS---GFGSYGYG---------SGFG-GYGYGSGFGGYGYGCCRPSYNGG 83
SG G G +G+G G G++G G G+G G G+G G+ GYG G ++ G
Sbjct: 201 SGRG-GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGS 259
Query: 84 YGFSG 88
G+ G
Sbjct: 260 PGYGG 264
>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
[Homo sapiens]
Length = 341
Score = 59.3 bits (142), Expect = 6e-10
Identities = 38/82 (46%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 10 GLGYSCGGFGGLGYGYGC-------GCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGY 62
G G S GG G G G G G GS RG G GY GYG G G G++G G+GG
Sbjct: 196 GFGDSRGGGGNFGPGPGSNFRGGSDGYGS--GRGFGDGYNGYGGGPGGGNFGGSPGYGGG 253
Query: 63 GYGSGFGGYGYGCCRPSYNGGY 84
G G GG GYG Y GGY
Sbjct: 254 RGGYGGGGPGYGNQGGGYGGGY 275
Score = 51.6 bits (122), Expect = 1e-07
Identities = 44/110 (40%), Positives = 49/110 (44%), Gaps = 26/110 (23%)
Query: 4 YGSYYGGLGYSCGG--FGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG---YGSG 58
+G Y G G GG FGG GYG G G + G G G G GYG G+ +YG YGSG
Sbjct: 228 FGDGYNGYGGGPGGGNFGG-SPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSG 286
Query: 59 ----FGGY-----GYG----SGFGG-------YGYGCCRPSYNGGYGFSG 88
FG Y YG FGG YG G P +GG G G
Sbjct: 287 NYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPYGGGNYGPGGSGGSGGYG 336
Score = 47.8 bits (112), Expect = 2e-06
Identities = 38/84 (45%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 9 GGLGYSCG-GFGGLGYGYGCGCGSFCRRGSGCGYGGY-GYGSGFGSYGYGSGFGGYGYGS 66
G GY G GFG GYG G G G +GG GYG G G Y G GG GYG+
Sbjct: 218 GSDGYGSGRGFGDGYNGYGGGPG-------GGNFGGSPGYGGGRGGY----GGGGPGYGN 266
Query: 67 GFGGYGYGCCRPSYNGGYGFSGFY 90
GGYG G +Y GG SG Y
Sbjct: 267 QGGGYGGG--YDNYGGGNYGSGNY 288
Score = 47.4 bits (111), Expect = 2e-06
Identities = 33/82 (40%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 16 GGFGGLGYGYGCGCGSFCRRGSGCGY--GGYGYGSGFGSYGYGSGFGGYGYGSGFGGY-- 71
G G G+G G G G G + G GYGSG G+G G+ GYG G G G +
Sbjct: 190 GRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSG---RGFGDGYNGYGGGPGGGNFGG 246
Query: 72 --GYGCCRPSYNG---GYGFSG 88
GYG R Y G GYG G
Sbjct: 247 SPGYGGGRGGYGGGGPGYGNQG 268
Score = 34.7 bits (78), Expect = 0.016
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 14/65 (21%)
Query: 37 SGCGYGGYGYGS---GFGSYGYG---------SGFG-GYGYGSGFGGYGYGCCRPSYNGG 83
SG G G +G+G G G++G G G+G G G+G G+ GYG G ++ G
Sbjct: 189 SGRG-GNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGS 247
Query: 84 YGFSG 88
G+ G
Sbjct: 248 PGYGG 252
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 58.9 bits (141), Expect = 8e-10
Identities = 39/93 (41%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG--------YG---S 57
GG GY+ +GG G G G G ++ G G YGG YG+GFG +G YG S
Sbjct: 213 GGGGYN--SYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKS 270
Query: 58 GFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
G GG G GS +GG Y GGYG G Y
Sbjct: 271 GGGGGGGGSSWGGRSNS---GPYRGGYGGGGGY 300
Score = 56.6 bits (135), Expect = 4e-09
Identities = 38/96 (39%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 9 GGLGYSCGGFGGLGYGYGCGCGSFCRRGSGC--GYGGYGYGSG-----FGSYGYGSGFGG 61
GG S GG GG G G G + G G YGGYG G G +G G GS +GG
Sbjct: 186 GGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGG 245
Query: 62 YGYGSGFGGYG--------YGCCRPSYNGGYGFSGF 89
YG+GFGG+G YG + GG G S +
Sbjct: 246 SDYGNGFGGFGSYSQHQSSYGPMKSGGGGGGGGSSW 281
Score = 54.3 bits (129), Expect = 2e-08
Identities = 40/93 (43%), Positives = 44/93 (47%), Gaps = 22/93 (23%)
Query: 8 YGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYG--------YG--- 56
YGG G GG GG YG G G G YGG YG+GFG +G YG
Sbjct: 220 YGGYG---GGGGGGYNAYGGG-------GGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMK 269
Query: 57 SGFGGYGYGSGFGG-YGYGCCRPSYNGGYGFSG 88
SG GG G GS +GG G R Y GG G+ G
Sbjct: 270 SGGGGGGGGSSWGGRSNSGPYRGGYGGGGGYGG 302
Score = 42.7 bits (99), Expect = 6e-05
Identities = 30/69 (43%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
GS YGG Y GFGG G Y S+ SG G GG G G G G GGYG
Sbjct: 240 GSSYGGSDYG-NGFGGFG-SYSQHQSSYGPMKSGGGGGGGGSSWG-GRSNSGPYRGGYGG 296
Query: 65 GSGFGGYGY 73
G G+GG +
Sbjct: 297 GGGYGGSSF 305
Score = 41.2 bits (95), Expect = 2e-04
Identities = 35/79 (44%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 23 YGYGCGCGSFCRRGSGCGYGGYGYGSGFG----SYGYGSGFGGY-GYGSGFGG----YGY 73
Y G G GS RG G GG G G G S G G G+ Y GYG G GG YG
Sbjct: 180 YSGGGGGGSRSSRG---GRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGG 236
Query: 74 GCCRPSYNG---GYGFSGF 89
G SY G G GF GF
Sbjct: 237 GGGGSSYGGSDYGNGFGGF 255
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 58.5 bits (140), Expect = 1e-09
Identities = 42/94 (44%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 5 GSYYGGLG---YSC---GGFGG---LGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGY 55
GS GG G SC GG+GG GYG G G G RG G G+GG G G G +G
Sbjct: 74 GSRAGGFGGGRSSCAFAGGYGGGFGSGYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGG 133
Query: 56 GSGFGGYGYGSGFGGYGYGCCRPSYNGGYGFSGF 89
GFGG G G GG+G G GG+G GF
Sbjct: 134 AGGFGGPGGFGGSGGFG-GPGSLGSPGGFGPGGF 166
Score = 53.9 bits (128), Expect = 3e-08
Identities = 34/79 (43%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
G Y GG G GG G G+ G G GS RG G G GG G+G G + GSGFG
Sbjct: 536 GGYGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGG-GFGGGSSGFSGGSGFGSIS- 593
Query: 65 GSGFGGYGYGCCRPSYNGG 83
G+ +G G G S GG
Sbjct: 594 GARYGVSGGGFSSASNRGG 612
Score = 52.0 bits (123), Expect = 1e-07
Identities = 38/106 (35%), Positives = 41/106 (38%), Gaps = 35/106 (33%)
Query: 16 GGFGGLGYGYGCGCGSFCRRG----------------------------SGCGYGGYGYG 47
GG GG YG+ G G F R S C + G GYG
Sbjct: 36 GGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAG-GYG 94
Query: 48 SGFGSYGYGSGF-----GGYGYGSGFGGYGYGCCRPSYNGGYGFSG 88
GFGS GYG GF GG G G GFGG G + G GF G
Sbjct: 95 GGFGS-GYGGGFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGG 139
Score = 46.2 bits (108), Expect = 5e-06
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY 64
G + GG G GGFGG G G+G G G F G G GG+G GFG G GG+G
Sbjct: 107 GGFGGGRGMG-GGFGGAG-GFG-GAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGP 163
Query: 65 GSGFGG 70
G GG
Sbjct: 164 GGFPGG 169
Score = 43.5 bits (101), Expect = 4e-05
Identities = 33/73 (45%), Positives = 39/73 (53%), Gaps = 17/73 (23%)
Query: 14 SCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGYGSGFGGYGY 73
S GG+GG GYG G G G GG G+ +G GS GSGFG G G G GG G+
Sbjct: 534 SAGGYGG---GYGGGMGG--------GLGG-GFSAGGGS---GSGFGR-GGGGGIGG-GF 576
Query: 74 GCCRPSYNGGYGF 86
G ++GG GF
Sbjct: 577 GGGSSGFSGGSGF 589
Score = 42.4 bits (98), Expect = 8e-05
Identities = 29/54 (53%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 37 SGCGYGGYGYGSGFGSYGYGSGFG-GYGYGSGFGGYGYGCCRPSYNGG-YGFSG 88
S GYGG GYG G G G G GF G G GSGFG G G + GG GFSG
Sbjct: 534 SAGGYGG-GYGGGMGG-GLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSG 585
Score = 34.7 bits (78), Expect = 0.016
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 22/88 (25%)
Query: 17 GFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYGY------------ 64
G G G+ S R S + G G+G G+YG+ SG GG+G
Sbjct: 10 GGGSQGFSGRSAVVSGSSRMSCVAHSG---GAGGGAYGFRSGAGGFGSRSLYNLGGNKSI 66
Query: 65 -------GSGFGGYGYGCCRPSYNGGYG 85
GS GG+G G ++ GGYG
Sbjct: 67 SISVAAGGSRAGGFGGGRSSCAFAGGYG 94
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 58.2 bits (139), Expect = 1e-09
Identities = 40/86 (46%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 4 YGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGG-YGYGSGFG---SYGYGSGF 59
YG GG G GG+GG GYG G + S GYGG G GSG+G S GYG
Sbjct: 491 YGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 550
Query: 60 GGYGYGSGFGGYGYGCCRPSYNGGYG 85
G GYG GG GYG R Y G G
Sbjct: 551 SGGGYGGDRGG-GYGGDRGGYGGKMG 575
Score = 52.4 bits (124), Expect = 8e-08
Identities = 39/84 (46%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 5 GSYYGGLGYSCGGFGG-LGYGYGCGCGSFCRRGSGCGYGGY--GYGSGFGSYGYGSGFGG 61
G GG G GG+GG G GYG G + G GYGG GYG G YG GG
Sbjct: 470 GDRGGGYGGDRGGYGGDRGGGYGGDRGGY--GGDRGGYGGDRGGYGGDRGGYGGDRSRGG 527
Query: 62 YGYGSGFGGYGYGCCRPSYNGGYG 85
YG G GG GYG R +GGYG
Sbjct: 528 YG-GDRGGGSGYGGDR---SGGYG 547
Score = 51.2 bits (121), Expect = 2e-07
Identities = 40/90 (44%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 9 GGLGYSCGGFGG--LGYGYG---CGCGSFCRRGSGCGYGGYGYGSGFGSY---GYGSGFG 60
GG G GG+GG G GYG G + SG GYGG G G+G GYG G
Sbjct: 406 GGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRG 465
Query: 61 GYGYGSGFGGYGYGCCRPSYNG--GYGFSG 88
G GYG GG GYG R Y G G G+ G
Sbjct: 466 G-GYGGDRGG-GYGGDRGGYGGDRGGGYGG 493
Score = 51.2 bits (121), Expect = 2e-07
Identities = 39/93 (41%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYG- 63
G Y G G GG G GYG G G RG G G GYG G GYG GGYG
Sbjct: 450 GGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRG--GYGGDRGGYGG 507
Query: 64 ----YGSGFGGYGYGCCRPSY----NGGYGFSG 88
YG GGYG R Y GG G+ G
Sbjct: 508 DRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGG 540
Score = 49.3 bits (116), Expect = 6e-07
Identities = 44/104 (42%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 5 GSYYGGLGYSC----GGFGG--LGYGYGCGCGSFCRRGSGCGYGGY---GYGSGFGSYG- 54
G G GYS GG+GG G GYG G G GYGG GYG G YG
Sbjct: 426 GDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGG 485
Query: 55 -YGSGFGGY--GYGSGFGGYG-----YGCCRPSY-----NGGYG 85
G G+GG GYG GGYG YG R Y GGYG
Sbjct: 486 DRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYG 529
Score = 49.3 bits (116), Expect = 6e-07
Identities = 40/92 (43%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 4 YGSYYGGLGYSCGG-FGGLGYGYGCGCGSF--CRRGSGCGYGGYGYGSGFGSY----GYG 56
YG GG G GG +GG GYG G + R G G GGYG G Y G G
Sbjct: 476 YGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGG 535
Query: 57 SGFGG---YGYGSGFGGYGYGCCRPSYNGGYG 85
SG+GG GYG G GYG R GGYG
Sbjct: 536 SGYGGDRSGGYGGDRSGGGYGGDR---GGGYG 564
Score = 48.5 bits (114), Expect = 1e-06
Identities = 43/94 (45%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 5 GSYYGGLGYSCGGFGG--LGYGYG---CGCGSFCRRGSGCGYG-GYGYGSGFGSYGYGSG 58
G YGG S GG+ G G GYG G G RG G G G GYG G GYG
Sbjct: 421 GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGD 479
Query: 59 FGGYG--YGSGFGGY--GYGCCRPSY---NGGYG 85
GGYG G G+GG GYG R Y GGYG
Sbjct: 480 RGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYG 513
Score = 42.7 bits (99), Expect = 6e-05
Identities = 33/78 (42%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 14 SCGGFGGLGYGYGCGC-GSFCRRGSGCGYGGYGYGSGFGSY-----GYGSGFGGYGYGSG 67
S G F G GYG G G R G GYGG G G+G GY G GYG
Sbjct: 387 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGD 446
Query: 68 FGGYGYGCCRPSYNGGYG 85
G GYG R GGYG
Sbjct: 447 RSGGGYGGDR---GGGYG 461
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 14/72 (19%)
Query: 4 YGSYYGGLGYSCGGFGGL----GYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSY------ 53
YG GG G GG+GG GYG G GS GYGG G G+G
Sbjct: 505 YGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYG 564
Query: 54 ----GYGSGFGG 61
GYG GG
Sbjct: 565 GDRGGYGGKMGG 576
Score = 29.3 bits (64), Expect = 0.69
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 1 MSHYGSY--YGGLGYSCGGFGGLG-YGYGCGCGSFCRRGSGCGYGGYGYG-SGFGSYG-- 54
MS GSY GG S +G G GYG S+ G YG SG+ SYG
Sbjct: 1 MSDSGSYGQSGGEQQSYSTYGNPGSQGYGQASQSYSGYGQTTD-SSYGQNYSGYSSYGQS 59
Query: 55 YGSGFGGY 62
Y +GGY
Sbjct: 60 YSQSYGGY 67
Score = 27.3 bits (59), Expect = 2.6
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 42 GGYGYGSGFGSY-GYGSGFGGYGYGSGFGGY-GYGCCRPSYNGGY 84
G GYG SY GYG YG + GY YG GGY
Sbjct: 24 GSQGYGQASQSYSGYGQTTDS-SYGQNYSGYSSYGQSYSQSYGGY 67
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 58.2 bits (139), Expect = 1e-09
Identities = 40/86 (46%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 4 YGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGG-YGYGSGFG---SYGYGSGF 59
YG GG G GG+GG GYG G + S GYGG G GSG+G S GYG
Sbjct: 494 YGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 553
Query: 60 GGYGYGSGFGGYGYGCCRPSYNGGYG 85
G GYG GG GYG R Y G G
Sbjct: 554 SGGGYGGDRGG-GYGGDRGGYGGKMG 578
Score = 52.4 bits (124), Expect = 8e-08
Identities = 39/84 (46%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 5 GSYYGGLGYSCGGFGG-LGYGYGCGCGSFCRRGSGCGYGGY--GYGSGFGSYGYGSGFGG 61
G GG G GG+GG G GYG G + G GYGG GYG G YG GG
Sbjct: 473 GDRGGGYGGDRGGYGGDRGGGYGGDRGGY--GGDRGGYGGDRGGYGGDRGGYGGDRSRGG 530
Query: 62 YGYGSGFGGYGYGCCRPSYNGGYG 85
YG G GG GYG R +GGYG
Sbjct: 531 YG-GDRGGGSGYGGDR---SGGYG 550
Score = 51.2 bits (121), Expect = 2e-07
Identities = 40/90 (44%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 9 GGLGYSCGGFGG--LGYGYG---CGCGSFCRRGSGCGYGGYGYGSGFGSY---GYGSGFG 60
GG G GG+GG G GYG G + SG GYGG G G+G GYG G
Sbjct: 409 GGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRG 468
Query: 61 GYGYGSGFGGYGYGCCRPSYNG--GYGFSG 88
G GYG GG GYG R Y G G G+ G
Sbjct: 469 G-GYGGDRGG-GYGGDRGGYGGDRGGGYGG 496
Score = 51.2 bits (121), Expect = 2e-07
Identities = 39/93 (41%), Positives = 40/93 (43%), Gaps = 11/93 (11%)
Query: 5 GSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFGGYG- 63
G Y G G GG G GYG G G RG G G GYG G GYG GGYG
Sbjct: 453 GGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRG--GYGGDRGGYGG 510
Query: 64 ----YGSGFGGYGYGCCRPSY----NGGYGFSG 88
YG GGYG R Y GG G+ G
Sbjct: 511 DRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGG 543
Score = 49.3 bits (116), Expect = 6e-07
Identities = 44/104 (42%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 5 GSYYGGLGYSC----GGFGG--LGYGYGCGCGSFCRRGSGCGYGGY---GYGSGFGSYG- 54
G G GYS GG+GG G GYG G G GYGG GYG G YG
Sbjct: 429 GDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGG 488
Query: 55 -YGSGFGGY--GYGSGFGGYG-----YGCCRPSY-----NGGYG 85
G G+GG GYG GGYG YG R Y GGYG
Sbjct: 489 DRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYG 532
Score = 49.3 bits (116), Expect = 6e-07
Identities = 40/92 (43%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 4 YGSYYGGLGYSCGG-FGGLGYGYGCGCGSF--CRRGSGCGYGGYGYGSGFGSY----GYG 56
YG GG G GG +GG GYG G + R G G GGYG G Y G G
Sbjct: 479 YGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGG 538
Query: 57 SGFGG---YGYGSGFGGYGYGCCRPSYNGGYG 85
SG+GG GYG G GYG R GGYG
Sbjct: 539 SGYGGDRSGGYGGDRSGGGYGGDR---GGGYG 567
Score = 48.5 bits (114), Expect = 1e-06
Identities = 43/94 (45%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 5 GSYYGGLGYSCGGFGG--LGYGYG---CGCGSFCRRGSGCGYG-GYGYGSGFGSYGYGSG 58
G YGG S GG+ G G GYG G G RG G G G GYG G GYG
Sbjct: 424 GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGG-GYGGD 482
Query: 59 FGGYG--YGSGFGGY--GYGCCRPSY---NGGYG 85
GGYG G G+GG GYG R Y GGYG
Sbjct: 483 RGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYG 516
Score = 42.7 bits (99), Expect = 6e-05
Identities = 33/78 (42%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 14 SCGGFGGLGYGYGCGC-GSFCRRGSGCGYGGYGYGSGFGSY-----GYGSGFGGYGYGSG 67
S G F G GYG G G R G GYGG G G+G GY G GYG
Sbjct: 390 SGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGD 449
Query: 68 FGGYGYGCCRPSYNGGYG 85
G GYG R GGYG
Sbjct: 450 RSGGGYGGDR---GGGYG 464
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 14/72 (19%)
Query: 4 YGSYYGGLGYSCGGFGGL----GYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSY------ 53
YG GG G GG+GG GYG G GS GYGG G G+G
Sbjct: 508 YGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYG 567
Query: 54 ----GYGSGFGG 61
GYG GG
Sbjct: 568 GDRGGYGGKMGG 579
Score = 30.0 bits (66), Expect = 0.41
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 42 GGYGYGSGFGSY-GYGSGFGGYGYGSGFGGY-GYGCCRPSYNGGYG 85
G GYG SY GYG YG + GY YG + Y+ YG
Sbjct: 24 GSQGYGQASQSYSGYGQTTDS-SYGQNYSGYSSYGQSQSGYSQSYG 68
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.159 0.580
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,073,425
Number of Sequences: 37866
Number of extensions: 306723
Number of successful extensions: 7645
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1159
Number of HSP's gapped (non-prelim): 2447
length of query: 90
length of database: 18,247,518
effective HSP length: 62
effective length of query: 28
effective length of database: 15,899,826
effective search space: 445195128
effective search space used: 445195128
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.