Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP19-3 Sequence: fasta or formatted (81aa) NCBI GI: 31791026
Description:

keratin associated protein 19-3

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            6.2          5           1
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       7.4          6           1
 G glycine            43.2         35           2
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             3.7          3           1
 M methionine          1.2          1           1
 N asparagine          0.0          0           0
 P proline             1.2          1           1
 Q glutamine           0.0          0           0
 R arginine            3.7          3           2
 S serine              9.9          8           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           23.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-3 
KRTAP19-1             0.859   keratin associated protein 19-1 
KRTAP19-5             0.659   keratin associated protein 19-5 
KRTAP19-8             0.524   keratin associated protein 19-8 
KRTAP19-7             0.524   keratin associated protein 19-7 
KRTAP19-4             0.518   keratin associated protein 19-4 
KRTAP19-6             0.406   keratin associated protein 19-6 
KRTAP20-2             0.388   keratin associated protein 20-2 
KRTAP6-1              0.306   keratin associated protein 6-1 
LOC647262             0.288   PREDICTED: hypothetical protein 
KRTAP6-3              0.288   keratin associated protein 6-3 
KRTAP21-2             0.276   keratin associated protein 21-2 
LOC731932             0.265   PREDICTED: hypothetical protein 
LOC731932             0.265   PREDICTED: hypothetical protein 
LOC731932             0.265   PREDICTED: hypothetical protein 
KRTAP20-1             0.265   keratin associated protein 20-1 
KRTAP6-2              0.259   keratin associated protein 6-2 
KRTAP21-1             0.253   keratin associated protein 21-1 
KRTAP19-2             0.241   keratin associated protein 19-2 
KRT1                  0.229   keratin 1 
FAM98B                0.200   family with sequence similarity 98, member B isofor...
HNRNPA3               0.194   heterogeneous nuclear ribonucleoprotein A3 
KRT3                  0.176   keratin 3 
KRT10                 0.171   keratin 10 
KRT9                  0.171   keratin 9 
HNRNPA1               0.171   heterogeneous nuclear ribonucleoprotein A1 isoform b...
HNRNPA0               0.171   heterogeneous nuclear ribonucleoprotein A0 
KRTAP5-5              0.165   keratin associated protein 5-5 
TAF15                 0.159   TBP-associated factor 15 isoform 2 
TAF15                 0.159   TBP-associated factor 15 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press