Guide to the Human Genome
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Name: KRTAP19-5 Sequence: fasta or formatted (72aa) NCBI GI: 31791022
Description:

keratin associated protein 19-5

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            5.6          4           1
 D aspartate           2.8          2           2
 E glutamate           0.0          0           0
 F phenylalanine       6.9          5           1
 G glycine            38.9         28           3
 H histidine           0.0          0           0
 I isoleucine          0.0          0           0
 K lysine              0.0          0           0
 L leucine             4.2          3           1
 M methionine          1.4          1           1
 N asparagine          2.8          2           1
 P proline             1.4          1           1
 Q glutamine           0.0          0           0
 R arginine            5.6          4           2
 S serine              6.9          5           1
 T threonine           0.0          0           0
 V valine              0.0          0           0
 W tryptophan          0.0          0           0
 Y tyrosine           23.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 19-5 
KRTAP19-3             0.752   keratin associated protein 19-3 
KRTAP19-1             0.671   keratin associated protein 19-1 
KRTAP19-4             0.584   keratin associated protein 19-4 
KRTAP19-8             0.564   keratin associated protein 19-8 
KRTAP19-7             0.557   keratin associated protein 19-7 
KRTAP20-2             0.490   keratin associated protein 20-2 
KRTAP19-6             0.477   keratin associated protein 19-6 
KRTAP19-2             0.329   keratin associated protein 19-2 
KRTAP6-1              0.322   keratin associated protein 6-1 
KRTAP20-1             0.309   keratin associated protein 20-1 
KRTAP6-3              0.262   keratin associated protein 6-3 
KRTAP21-2             0.262   keratin associated protein 21-2 
KRTAP21-1             0.248   keratin associated protein 21-1 
KRTAP6-2              0.248   keratin associated protein 6-2 
KRTAP13-1             0.235   keratin associated protein 13-1 
LOC731932             0.235   PREDICTED: hypothetical protein 
LOC731932             0.235   PREDICTED: hypothetical protein 
LOC731932             0.235   PREDICTED: hypothetical protein 
LOC647262             0.208   PREDICTED: hypothetical protein 
KRTAP20-3             0.174   keratin associated protein 20-3 
KRTAP13-2             0.174   keratin associated protein 13-2 
KRT5                  0.174   keratin 5 
HNRNPA3               0.168   heterogeneous nuclear ribonucleoprotein A3 
KRT1                  0.168   keratin 1 
TAF15                 0.148   TBP-associated factor 15 isoform 2 
TAF15                 0.148   TBP-associated factor 15 isoform 1 
HNRNPA0               0.148   heterogeneous nuclear ribonucleoprotein A0 
FAM98B                0.148   family with sequence similarity 98, member B isofor...
HNRNPA1               0.148   heterogeneous nuclear ribonucleoprotein A1 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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