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Search of human proteins with 31791026
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|31791026 keratin associated protein 19-3 [Homo sapiens]
(81 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|31791026 keratin associated protein 19-3 [Homo sapiens] 195 7e-51
gi|31791030 keratin associated protein 19-1 [Homo sapiens] 171 2e-43
gi|31791022 keratin associated protein 19-5 [Homo sapiens] 137 2e-33
gi|149944573 keratin associated protein 19-8 [Homo sapiens] 114 2e-26
gi|31791018 keratin associated protein 19-7 [Homo sapiens] 114 2e-26
gi|31791028 keratin associated protein 19-4 [Homo sapiens] 113 3e-26
gi|31791024 keratin associated protein 19-6 [Homo sapiens] 94 2e-20
gi|31791014 keratin associated protein 20-2 [Homo sapiens] 91 2e-19
gi|31791038 keratin associated protein 6-1 [Homo sapiens] 77 4e-15
gi|239744833 PREDICTED: hypothetical protein [Homo sapiens] 74 3e-14
gi|153945796 keratin associated protein 6-3 [Homo sapiens] 74 3e-14
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 72 1e-13
gi|169206147 PREDICTED: hypothetical protein [Homo sapiens] 70 3e-13
gi|239750526 PREDICTED: hypothetical protein [Homo sapiens] 70 3e-13
gi|169205935 PREDICTED: hypothetical protein [Homo sapiens] 70 3e-13
gi|31791020 keratin associated protein 20-1 [Homo sapiens] 70 3e-13
gi|31791040 keratin associated protein 6-2 [Homo sapiens] 69 8e-13
gi|31791010 keratin associated protein 21-1 [Homo sapiens] 68 2e-12
gi|31791032 keratin associated protein 19-2 [Homo sapiens] 66 7e-12
gi|119395750 keratin 1 [Homo sapiens] 64 3e-11
gi|109452587 family with sequence similarity 98, member B isofor... 59 6e-10
gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo sap... 58 2e-09
gi|109148552 keratin 3 [Homo sapiens] 55 1e-08
gi|195972866 keratin 10 [Homo sapiens] 54 2e-08
gi|55956899 keratin 9 [Homo sapiens] 54 3e-08
gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b... 54 3e-08
gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo sapi... 54 3e-08
gi|122891874 keratin associated protein 5-5 [Homo sapiens] 53 6e-08
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 52 8e-08
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 52 8e-08
>gi|31791026 keratin associated protein 19-3 [Homo sapiens]
Length = 81
Score = 195 bits (495), Expect = 7e-51
Identities = 81/81 (100%), Positives = 81/81 (100%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG
Sbjct: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GYGYGCYRPSYYGGYGFSGFY
Sbjct: 61 GYGYGCYRPSYYGGYGFSGFY 81
>gi|31791030 keratin associated protein 19-1 [Homo sapiens]
Length = 90
Score = 171 bits (432), Expect = 2e-43
Identities = 75/90 (83%), Positives = 76/90 (84%), Gaps = 9/90 (10%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGG---------YGYGSGFG 51
MS+YGSYYGGLGY CGGFGGLGYGYGCGCGSF R GSGCGYGG YGYGSGFG
Sbjct: 1 MSHYGSYYGGLGYSCGGFGGLGYGYGCGCGSFCRRGSGCGYGGYGYGSGFGSYGYGSGFG 60
Query: 52 GYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
GYGYGSGFGGYGYGC RPSY GGYGFSGFY
Sbjct: 61 GYGYGSGFGGYGYGCCRPSYNGGYGFSGFY 90
>gi|31791022 keratin associated protein 19-5 [Homo sapiens]
Length = 72
Score = 137 bits (344), Expect = 2e-33
Identities = 61/81 (75%), Positives = 64/81 (79%), Gaps = 9/81 (11%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
M+YYG+YYGGLGYG GGF LGYGYGCGCGSFRRL GYG G+GGYGYGSGFG
Sbjct: 1 MNYYGNYYGGLGYGYGGFDDLGYGYGCGCGSFRRL---------GYGGGYGGYGYGSGFG 51
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GYGY RPS YGGYGFSGFY
Sbjct: 52 GYGYRSCRPSCYGGYGFSGFY 72
>gi|149944573 keratin associated protein 19-8 [Homo sapiens]
Length = 63
Score = 114 bits (285), Expect = 2e-26
Identities = 53/81 (65%), Positives = 54/81 (66%), Gaps = 18/81 (22%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
MSYY SYYGGLGYG GGFGG GYGYGCG GSFRRLG GCGYG
Sbjct: 1 MSYYRSYYGGLGYGYGGFGGWGYGYGCGYGSFRRLGYGCGYG------------------ 42
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GYG+ C RP YYGGYGFS FY
Sbjct: 43 GYGFSCCRPLYYGGYGFSAFY 63
>gi|31791018 keratin associated protein 19-7 [Homo sapiens]
Length = 63
Score = 114 bits (284), Expect = 2e-26
Identities = 53/81 (65%), Positives = 53/81 (65%), Gaps = 18/81 (22%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
MSY GSYYGGLGYGCGGFGGLGYGY CGCGSFRRLG GCGY G
Sbjct: 1 MSYSGSYYGGLGYGCGGFGGLGYGYSCGCGSFRRLGYGCGY------------------G 42
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GY Y C PS YGGY SGFY
Sbjct: 43 GYRYSCCHPSCYGGYWSSGFY 63
>gi|31791028 keratin associated protein 19-4 [Homo sapiens]
Length = 84
Score = 113 bits (283), Expect = 3e-26
Identities = 53/78 (67%), Positives = 54/78 (69%), Gaps = 18/78 (23%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
MSYYGSYY GLGYGCGGFGGLGYGYGCGCGSFRRLG GCG+GG G
Sbjct: 1 MSYYGSYYRGLGYGCGGFGGLGYGYGCGCGSFRRLGYGCGFGGNG--------------- 45
Query: 61 GYGYGCYRPSYYGGYGFS 78
YG RPS YGGYGFS
Sbjct: 46 ---YGYCRPSCYGGYGFS 60
>gi|31791024 keratin associated protein 19-6 [Homo sapiens]
Length = 58
Score = 94.4 bits (233), Expect = 2e-20
Identities = 46/81 (56%), Positives = 47/81 (58%), Gaps = 23/81 (28%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
M YYGSYY GLGYGCGGF GG GYG G GGY YGSG+G
Sbjct: 1 MRYYGSYYRGLGYGCGGF-----------------------GGLGYGCGCGGYRYGSGYG 37
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GY YGC RPS GYGFSGFY
Sbjct: 38 GYRYGCCRPSCREGYGFSGFY 58
>gi|31791014 keratin associated protein 20-2 [Homo sapiens]
Length = 65
Score = 90.9 bits (224), Expect = 2e-19
Identities = 45/81 (55%), Positives = 48/81 (59%), Gaps = 16/81 (19%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
M YY +YYGGL YG G GG GYGCGCG YG+G G G GYG G+G
Sbjct: 1 MCYYSNYYGGLRYGYGVLGG---GYGCGCG-------------YGHGYGGLGCGYGRGYG 44
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GYGYGC RPS YG Y GFY
Sbjct: 45 GYGYGCCRPSCYGRYWSCGFY 65
>gi|31791038 keratin associated protein 6-1 [Homo sapiens]
Length = 71
Score = 76.6 bits (187), Expect = 4e-15
Identities = 42/69 (60%), Positives = 44/69 (63%), Gaps = 16/69 (23%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYG---------CGCGSFRRLGSGCGYG-----GYGYG 47
SYYG+YYG GYG G+GGLGYGYG CGCG FRRLG G GYG GYGYG
Sbjct: 4 SYYGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCG-FRRLGCGYGYGSRSLCGYGYG 62
Query: 48 SGFG-GYGY 55
G G GY Y
Sbjct: 63 CGSGSGYYY 71
Score = 28.5 bits (62), Expect = 1.2
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 17/58 (29%)
Query: 29 CGSFRRLGSGCGYGGYGYGSGFGGYGYGS-GFGGYGYGCYRPSYYG--------GYGF 77
CGS+ YG Y G+G GYG G+G G GC S G GYG+
Sbjct: 2 CGSY--------YGNYYGTPGYGFCGYGGLGYGYGGLGCGYGSCCGCGFRRLGCGYGY 51
>gi|239744833 PREDICTED: hypothetical protein [Homo sapiens]
Length = 129
Score = 73.6 bits (179), Expect = 3e-14
Identities = 47/90 (52%), Positives = 48/90 (53%), Gaps = 18/90 (20%)
Query: 4 YGSYYG---GLGYGCGGFGGLGYGYGCGCGSFRRLGSG----CGYG-----GYGYGSGFG 51
YGS YG G GY CG G G GYGCG GS G G CGYG GYG GSG G
Sbjct: 28 YGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCG 87
Query: 52 -----GYGYGSGFG-GYGYGCYRPSYYGGY 75
G GYG G+G GYG GC S Y GY
Sbjct: 88 YGTGFGCGYGCGYGTGYGCGCGSGSGYCGY 117
Score = 69.7 bits (169), Expect = 5e-13
Identities = 46/102 (45%), Positives = 51/102 (50%), Gaps = 27/102 (26%)
Query: 2 SYYGSYYG-GLGYGCGGFGGLGYGY----GCGCGSFRRLGSGCGYG---GYGYGSGFG-- 51
+YYG+ G G YGCG G GYGY GCG G+ G GCGYG G GYGS +G
Sbjct: 4 NYYGNSCGYGSSYGCGYGSGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYGSSYGCG 63
Query: 52 ---------------GYGYGSGFG-GYGYGC-YRPSYYGGYG 76
GYG GSG G G G+GC Y Y GYG
Sbjct: 64 YGTGYSCGYGSGYSCGYGSGSGCGYGTGFGCGYGCGYGTGYG 105
Score = 56.2 bits (134), Expect = 5e-09
Identities = 38/81 (46%), Positives = 41/81 (50%), Gaps = 23/81 (28%)
Query: 4 YGSYYG---GLGYGCG-------GFG---GLGYGYGCGCGSFRRLGSGCGYGGYGYGSGF 50
YGS YG G GY CG G+G G GYG G GC G GCGY G GYG G
Sbjct: 56 YGSSYGCGYGTGYSCGYGSGYSCGYGSGSGCGYGTGFGC------GYGCGY-GTGYGCGC 108
Query: 51 GGYGYGSGFGGYGYGCYRPSY 71
G GSG+ GY C+R Y
Sbjct: 109 GS---GSGYCGYRPFCFRRCY 126
Score = 52.8 bits (125), Expect = 6e-08
Identities = 39/80 (48%), Positives = 44/80 (55%), Gaps = 19/80 (23%)
Query: 15 CGGFGGLGYGYGC--GCGSFRRLGSGCGYG-----GYGYGSGFG---GYGYGSGFG-GYG 63
C + G GYG GCG GSG GYG G GYG+G+ G GYGSG+G GYG
Sbjct: 2 CCNYYGNSCGYGSSYGCG----YGSGYGYGYGSSYGCGYGTGYSCGYGCGYGSGYGCGYG 57
Query: 64 --YGC-YRPSYYGGYGFSGF 80
YGC Y Y GYG SG+
Sbjct: 58 SSYGCGYGTGYSCGYG-SGY 76
>gi|153945796 keratin associated protein 6-3 [Homo sapiens]
Length = 110
Score = 73.6 bits (179), Expect = 3e-14
Identities = 42/77 (54%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGY-GCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
SYY +Y GG GYGC G+GGLG GY GCG G G G GYGG G G G GYGS F
Sbjct: 11 SYYRNYNGGHGYGCCGYGGLGCGYGGCGYGCCGYGGLGFGYGGLDCGYGGLGCGYGS-FC 69
Query: 61 GYGYGCYRPSYYGGYGF 77
G GY Y GYG+
Sbjct: 70 GCGYRGLDCGYGCGYGY 86
Score = 67.0 bits (162), Expect = 3e-12
Identities = 44/89 (49%), Positives = 47/89 (52%), Gaps = 22/89 (24%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYG----------CGCGSFRRLGSGCGYGGYGYGSGFGGYG 54
G YGG GYGC G+GGLG+GYG CG GSF GCGY G G G GYG
Sbjct: 31 GCGYGGCGYGCCGYGGLGFGYGGLDCGYGGLGCGYGSF----CGCGYRGLDCGYGC-GYG 85
Query: 55 YGS-GFGGYGYGCYRPSYYGGYGFS-GFY 81
Y S F G GY C GYG S G+Y
Sbjct: 86 YVSHSFCGCGYRC-----GSGYGSSFGYY 109
Score = 39.7 bits (91), Expect = 5e-04
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 14/52 (26%)
Query: 29 CGSFRRLGSGCGYGGYGYGSGFGGYGYGS---GFGGYGYGCYRPSYYGGYGF 77
CGS+ Y Y G G+G GYG G+GG GYGC YGG GF
Sbjct: 9 CGSY--------YRNYNGGHGYGCCGYGGLGCGYGGCGYGC---CGYGGLGF 49
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 72.0 bits (175), Expect = 1e-13
Identities = 41/76 (53%), Positives = 45/76 (59%), Gaps = 9/76 (11%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYG-GYGYGSGFG-GYGYGSGF 59
+YY + GG GYG G G GYG G GCG GSGC YG GYG G G+G GYG G G+
Sbjct: 4 NYYRNCCGGCGYGSGWSSGCGYGCGYGCG----YGSGCRYGSGYGTGCGYGCGYGSGCGY 59
Query: 60 G-GYGYGC--YRPSYY 72
G GY C YRP Y
Sbjct: 60 GCGYSSSCCGYRPLCY 75
Score = 48.5 bits (114), Expect = 1e-06
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 14/64 (21%)
Query: 29 CGSFRRLGSGCGYG-----GYGYGSGFG-GYG----YGSGFG-GYGYGCYRPSYYGGYGF 77
C +R GCGYG G GYG G+G GYG YGSG+G G GYGC Y G G+
Sbjct: 3 CNYYRNCCGGCGYGSGWSSGCGYGCGYGCGYGSGCRYGSGYGTGCGYGC---GYGSGCGY 59
Query: 78 SGFY 81
Y
Sbjct: 60 GCGY 63
>gi|169206147 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 70.5 bits (171), Expect = 3e-13
Identities = 42/78 (53%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 6 SYYGG-LGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYG-GYGYGSGFG-GYGYGSGFG-- 60
+YYG GYGC G G GYGCG GS G G GY GYG GSG G G GYG G+G
Sbjct: 4 NYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCG 63
Query: 61 ---GYGYGCYRPSYYGGY 75
GYG GC S Y GY
Sbjct: 64 YGTGYGCGCGSGSGYCGY 81
Score = 67.4 bits (163), Expect = 2e-12
Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 19/83 (22%)
Query: 4 YGSYYG---GLGYGCG---GFG-GLGYGYGCGCGSFRRLGSGCGYG-------GYGYGSG 49
YG YG G GYGCG +G G G GY CG GS GSGCGYG G GYG+G
Sbjct: 12 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGYGTGYGCGYGCGYGTG 67
Query: 50 FG-GYGYGSGFGGYGYGCYRPSY 71
+G G G GSG+ GY C+R Y
Sbjct: 68 YGCGCGSGSGYCGYRPFCFRRCY 90
Score = 59.3 bits (142), Expect = 6e-10
Identities = 35/68 (51%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 15 CGGFGGLGYGYGCGCGSFRRLGSGCGYG---GYGYGSGFG-GYGYGSGFG-GYGYGC-YR 68
C + G GYGC G G GCGYG G GYG+G+ GYG GSG G G GYGC Y
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYG 61
Query: 69 PSYYGGYG 76
Y GYG
Sbjct: 62 CGYGTGYG 69
>gi|239750526 PREDICTED: hypothetical protein [Homo sapiens]
Length = 93
Score = 70.5 bits (171), Expect = 3e-13
Identities = 42/78 (53%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 6 SYYGG-LGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYG-GYGYGSGFG-GYGYGSGFG-- 60
+YYG GYGC G G GYGCG GS G G GY GYG GSG G G GYG G+G
Sbjct: 4 NYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCG 63
Query: 61 ---GYGYGCYRPSYYGGY 75
GYG GC S Y GY
Sbjct: 64 YGTGYGCGCGSGSGYCGY 81
Score = 67.4 bits (163), Expect = 2e-12
Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 19/83 (22%)
Query: 4 YGSYYG---GLGYGCG---GFG-GLGYGYGCGCGSFRRLGSGCGYG-------GYGYGSG 49
YG YG G GYGCG +G G G GY CG GS GSGCGYG G GYG+G
Sbjct: 12 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGYGTGYGCGYGCGYGTG 67
Query: 50 FG-GYGYGSGFGGYGYGCYRPSY 71
+G G G GSG+ GY C+R Y
Sbjct: 68 YGCGCGSGSGYCGYRPFCFRRCY 90
Score = 59.3 bits (142), Expect = 6e-10
Identities = 35/68 (51%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 15 CGGFGGLGYGYGCGCGSFRRLGSGCGYG---GYGYGSGFG-GYGYGSGFG-GYGYGC-YR 68
C + G GYGC G G GCGYG G GYG+G+ GYG GSG G G GYGC Y
Sbjct: 2 CCNYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYG 61
Query: 69 PSYYGGYG 76
Y GYG
Sbjct: 62 CGYGTGYG 69
>gi|169205935 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 70.5 bits (171), Expect = 3e-13
Identities = 42/78 (53%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 6 SYYGG-LGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYG-GYGYGSGFG-GYGYGSGFG-- 60
+YYG GYGC G G GYGCG GS G G GY GYG GSG G G GYG G+G
Sbjct: 34 NYYGNSCGYGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGSGSGCGYGTGYGCGYGCG 93
Query: 61 ---GYGYGCYRPSYYGGY 75
GYG GC S Y GY
Sbjct: 94 YGTGYGCGCGSGSGYCGY 111
Score = 67.4 bits (163), Expect = 2e-12
Identities = 42/83 (50%), Positives = 47/83 (56%), Gaps = 19/83 (22%)
Query: 4 YGSYYG---GLGYGCG---GFG-GLGYGYGCGCGSFRRLGSGCGYG-------GYGYGSG 49
YG YG G GYGCG +G G G GY CG GS GSGCGYG G GYG+G
Sbjct: 42 YGCSYGCGYGSGYGCGYGSSYGCGYGTGYSCGYGS----GSGCGYGTGYGCGYGCGYGTG 97
Query: 50 FG-GYGYGSGFGGYGYGCYRPSY 71
+G G G GSG+ GY C+R Y
Sbjct: 98 YGCGCGSGSGYCGYRPFCFRRCY 120
Score = 40.0 bits (92), Expect = 4e-04
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 36 GSGCGYGGYGYGSGFGGYGYGSGFGGYGYGC-YRPSYYGGYG 76
G+ CGYG YG G+G GYG G+G YGC Y Y GYG
Sbjct: 37 GNSCGYG-CSYGCGYGS-GYGCGYGS-SYGCGYGTGYSCGYG 75
>gi|31791020 keratin associated protein 20-1 [Homo sapiens]
Length = 56
Score = 70.5 bits (171), Expect = 3e-13
Identities = 41/81 (50%), Positives = 43/81 (53%), Gaps = 25/81 (30%)
Query: 1 MSYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
M YY +YYGG GYG GLG GYGCG +R G GCGYGGY G
Sbjct: 1 MIYYSNYYGGYGYG-----GLGCGYGCG---YR--GYGCGYGGY---------------G 35
Query: 61 GYGYGCYRPSYYGGYGFSGFY 81
GYG G Y PS YG Y GFY
Sbjct: 36 GYGNGYYCPSCYGRYWSYGFY 56
>gi|31791040 keratin associated protein 6-2 [Homo sapiens]
Length = 62
Score = 68.9 bits (167), Expect = 8e-13
Identities = 39/72 (54%), Positives = 42/72 (58%), Gaps = 14/72 (19%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYG-CGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
SYYG+YYG GYGC G+ GLGYGYG CG S CGY G+GYGS F F
Sbjct: 4 SYYGNYYGDHGYGCCGYEGLGYGYGSLRCG----YSSCCGY-GHGYGSRF--------FC 50
Query: 61 GYGYGCYRPSYY 72
G GYGC YY
Sbjct: 51 GCGYGCGSGYYY 62
Score = 31.2 bits (69), Expect = 0.19
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 25/69 (36%)
Query: 29 CGSFRRLGSGCGYGGYGYGSGFG-------GYGYGS---GFG---GYGYGCYRPSYYGGY 75
CGS+ YG Y G+G GYGYGS G+ GYG+G Y ++ G
Sbjct: 2 CGSY--------YGNYYGDHGYGCCGYEGLGYGYGSLRCGYSSCCGYGHG-YGSRFFCGC 52
Query: 76 GF---SGFY 81
G+ SG+Y
Sbjct: 53 GYGCGSGYY 61
>gi|31791010 keratin associated protein 21-1 [Homo sapiens]
Length = 79
Score = 67.8 bits (164), Expect = 2e-12
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 6 SYYG---GLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYG---GYGYGSGFG-GYGYGSG 58
+YYG G G GCG G G G GCG G+ G GCG+G G GYG+G+G GYG GSG
Sbjct: 4 NYYGNSCGYGSGCGCGYGSGSGCGCGYGTGYGCGYGCGFGSHYGCGYGTGYGCGYGSGSG 63
Query: 59 FGGYGYGCYRPSY 71
+ GY C+R Y
Sbjct: 64 YCGYRPFCFRRCY 76
Score = 58.5 bits (140), Expect = 1e-09
Identities = 34/71 (47%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 15 CGGFGGLGYGY--GCGCGSFRRLGSGCGYG---GYGYGSGFGGYGYGSGFGGYGYGCYRP 69
C + G GY GCGCG G GCGYG G GYG GFG + YG G+ G GYGC
Sbjct: 2 CCNYYGNSCGYGSGCGCGYGSGSGCGCGYGTGYGCGYGCGFGSH-YGCGY-GTGYGC--- 56
Query: 70 SYYGGYGFSGF 80
Y G G+ G+
Sbjct: 57 GYGSGSGYCGY 67
Score = 56.2 bits (134), Expect = 5e-09
Identities = 34/69 (49%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 15 CGGFGG-LGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGC-YRPSYY 72
C +G GYG GCGCG G GCGYG GYG G YG GFG + YGC Y Y
Sbjct: 3 CNYYGNSCGYGSGCGCGYGSGSGCGCGYGT-GYGCG-----YGCGFGSH-YGCGYGTGYG 55
Query: 73 GGYGFSGFY 81
GYG Y
Sbjct: 56 CGYGSGSGY 64
Score = 43.1 bits (100), Expect = 5e-05
Identities = 26/44 (59%), Positives = 27/44 (61%), Gaps = 9/44 (20%)
Query: 4 YGSYYGGLGYGCGGFG---GLGYGYGCGCGSFRRLGSGCGYGGY 44
YG+ YG GYGCG FG G GYG G GCG GSG GY GY
Sbjct: 30 YGTGYG-CGYGCG-FGSHYGCGYGTGYGCG----YGSGSGYCGY 67
>gi|31791032 keratin associated protein 19-2 [Homo sapiens]
Length = 52
Score = 65.9 bits (159), Expect = 7e-12
Identities = 33/59 (55%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 23 YGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
YGYGCGCGSF RLG GCGY G YG G G G GC PS Y Y F+GFY
Sbjct: 3 YGYGCGCGSFCRLGYGCGY---------EGCRYGCGHRGCGDGCCCPSCYRRYRFTGFY 52
Score = 26.9 bits (58), Expect = 3.5
Identities = 15/31 (48%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRR 34
YG Y G YGC G G G GC C S R
Sbjct: 17 YGCGYEGCRYGC---GHRGCGDGCCCPSCYR 44
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 63.9 bits (154), Expect = 3e-11
Identities = 38/76 (50%), Positives = 44/76 (57%), Gaps = 20/76 (26%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYG-YGSGFGGYGYGSGFG 60
S +G YGG G+G GGFGG G+G G G G GG+G +GSG GG+G G GFG
Sbjct: 88 SGFGGGYGGGGFGGGGFGGGGFG-----------GGGIGGGGFGGFGSGGGGFG-GGGFG 135
Query: 61 GYGYGCYRPSYYGGYG 76
G GYG GGYG
Sbjct: 136 GGGYG-------GGYG 144
Score = 60.1 bits (144), Expect = 4e-10
Identities = 41/83 (49%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 2 SYYGSYYGGLGYGCGGFGGLG-YG-----YGCGCGSFRRLGSGCGYGGYGYGSGFGGYGY 55
S YGS G G G GG GG G YG YG G GS+ G G G+G YG GS GGY
Sbjct: 530 SSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSGSSSGGYRG 589
Query: 56 GSGFGGYGYGCYRPSYYGGYGFS 78
GSG GG G R S G G S
Sbjct: 590 GSGGGGGGSSGGRGSGGGSSGGS 612
Score = 57.8 bits (138), Expect = 2e-09
Identities = 36/80 (45%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSG------CGYGGYGYGSGFGGYGYGSGFGG- 61
G G G GG+G G YG G GS+ G G G GG YGSG G YG G G GG
Sbjct: 516 GSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGH 575
Query: 62 --YGYGCYRPSYYGGYGFSG 79
YG G Y GG G G
Sbjct: 576 GSYGSGSSSGGYRGGSGGGG 595
Score = 48.9 bits (115), Expect = 9e-07
Identities = 35/83 (42%), Positives = 39/83 (46%), Gaps = 14/83 (16%)
Query: 9 GGLGYGCGGFGG-LGYGYGCGCGSFRRLGSGC---------GYGGYGYGSGFGGYGYGSG 58
GG CGG GG G G G G S LG G G G+G G+GG G+G G
Sbjct: 43 GGRFSSCGGGGGSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGG 102
Query: 59 -FGGYGYGCYRPSYYGGYGFSGF 80
FGG G+G GG GF GF
Sbjct: 103 GFGGGGFG---GGGIGGGGFGGF 122
Score = 47.8 bits (112), Expect = 2e-06
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGY-GSGFGGYG 63
GS+ G G+G LG R G G G+GG G GFGG G+ G GFGG G
Sbjct: 54 GSFGAGGGFGSRSLVNLGGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGGGG 113
Query: 64 YGCYRPSYYGGYGFSG 79
G +GG+G G
Sbjct: 114 IG---GGGFGGFGSGG 126
Score = 47.0 bits (110), Expect = 3e-06
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 19 GGLGYGYGCGCGSFRRLGSGCGYGGYGY-GSGFGGYGY-GSGFGGYGYGCYRPSYYGGYG 76
GG G G+G G G G G+GG G+ G GFGG G G GFGG+G G +GG G
Sbjct: 84 GGRGSGFGGGYG-------GGGFGGGGFGGGGFGGGGIGGGGFGGFGSG---GGGFGGGG 133
Query: 77 FSG 79
F G
Sbjct: 134 FGG 136
Score = 46.2 bits (108), Expect = 6e-06
Identities = 33/72 (45%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
Query: 14 GCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG----YGSGFGGYGYGCYRP 69
G G GG G GYG G GS G GG YGSG GG G YGSG YG G
Sbjct: 514 GGGSRGGGGGGYGSG-------GSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSY 566
Query: 70 SYYGGYGFSGFY 81
GG G G Y
Sbjct: 567 GSGGGGGGHGSY 578
Score = 45.1 bits (105), Expect = 1e-05
Identities = 36/101 (35%), Positives = 41/101 (40%), Gaps = 28/101 (27%)
Query: 7 YYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSG------CGYGG--YGYGSGFG------- 51
Y G G+ G G + Y S RR G G CG GG +G G GFG
Sbjct: 11 YRSGGGFSSGSAGIINYQRRTTSSSTRRSGGGGGRFSSCGGGGGSFGAGGGFGSRSLVNL 70
Query: 52 ------------GYGYGSGF-GGYGYGCYRPSYYGGYGFSG 79
G G GSGF GGYG G + +GG GF G
Sbjct: 71 GGSKSISISVARGGGRGSGFGGGYGGGGFGGGGFGGGGFGG 111
Score = 32.3 bits (72), Expect = 0.083
Identities = 25/60 (41%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGY-----GCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSG 58
YGS GG G+G G G GY G G GS G G GG G GG G SG
Sbjct: 566 YGSGGGGGGHGSYGSGSSSGGYRGGSGGGGGGSSG----GRGSGGGSSGGSIGGRGSSSG 621
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Query: 9 GGLGYGCGGFGGLGYG--YGCGC 29
GG G+G GGFGG GYG YG C
Sbjct: 125 GGGGFGGGGFGGGGYGGGYGPVC 147
>gi|109452587 family with sequence similarity 98, member B isoform 1
[Homo sapiens]
Length = 433
Score = 59.3 bits (142), Expect = 6e-10
Identities = 34/72 (47%), Positives = 38/72 (52%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYG 63
+G GG G G GG GG G G G G G F+ G G GGYG G+GG GYG +GG G
Sbjct: 359 WGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGG 418
Query: 64 YGCYRPSYYGGY 75
G GGY
Sbjct: 419 GGGGGGGGGGGY 430
Score = 49.7 bits (117), Expect = 5e-07
Identities = 36/75 (48%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYR 68
GG G G G GG G G G G G R G G G GG+G G G GG G G GG G R
Sbjct: 331 GGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGR 390
Query: 69 PSY--YGGYGFSGFY 81
Y GGYG G Y
Sbjct: 391 GDYGGRGGYGGRGGY 405
Score = 49.3 bits (116), Expect = 7e-07
Identities = 34/73 (46%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGY-GSG-FGGYGYGSGFGGYGYGC 66
GG G G GG+GG G G+G G G G G G G G+ G G +GG G G GGYG
Sbjct: 350 GGGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRG 409
Query: 67 YRPSYYGGYGFSG 79
Y Y GG G G
Sbjct: 410 YGDPYGGGGGGGG 422
Score = 48.1 bits (113), Expect = 1e-06
Identities = 36/90 (40%), Positives = 41/90 (45%), Gaps = 20/90 (22%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYG--------------SG 49
+G GG G G GG GG G+G G G + G G G GG+G G G
Sbjct: 338 WGGGGGGGGRGGGGGGGGRGGWGGGGGGWG--GGGGGGGGWGGGGGGGRGGFQGRGDYGG 395
Query: 50 FGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
GGYG G+GG GYG YGG G G
Sbjct: 396 RGGYGGRGGYGGRGYG----DPYGGGGGGG 421
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 33 RRLGSGCGYGGYGYGSGFGGYGYGSGFGGY-GYGCYRPSYYGGYGFSG 79
+R G G GG+G G G GG G G G GG G+G + GG G G
Sbjct: 327 KRQEGGGGRGGWGGGGGGGGRGGGGGGGGRGGWGGGGGGWGGGGGGGG 374
>gi|34740329 heterogeneous nuclear ribonucleoprotein A3 [Homo
sapiens]
Length = 378
Score = 57.8 bits (138), Expect = 2e-09
Identities = 39/79 (49%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGY 64
GSY GG G G GFGG G YG G G R G G GG GYG+ GGYG G G+ GY
Sbjct: 258 GSYGGGDG-GYNGFGGDGGNYGGGPGYSSR--GGYGGGGPGYGNQGGGYGGGGGYDGYNE 314
Query: 65 GCYRPSYYGG--YGFSGFY 81
G +GG YG G Y
Sbjct: 315 G----GNFGGGNYGGGGNY 329
Score = 57.0 bits (136), Expect = 3e-09
Identities = 32/73 (43%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 5 GSYYGGLGYGC-GGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYG 63
G+Y GG GY GG+GG G GYG G + G G GY GY G FGG YG G
Sbjct: 275 GNYGGGPGYSSRGGYGGGGPGYGNQGGGY---GGGGGYDGYNEGGNFGGGNYGGGGNYND 331
Query: 64 YGCYRPSYYGGYG 76
+G Y YG
Sbjct: 332 FGNYSGQQQSNYG 344
Score = 56.6 bits (135), Expect = 4e-09
Identities = 33/70 (47%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 10 GLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGY-GYGCYR 68
G G G G F G G +G G G+F R G+ G GGYG G G YG G GGY G+G
Sbjct: 215 GRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDG 274
Query: 69 PSYYGGYGFS 78
+Y GG G+S
Sbjct: 275 GNYGGGPGYS 284
Score = 52.4 bits (124), Expect = 8e-08
Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 5 GSYYGGLG-YGCGG-FGGLGYGYGCGCGSFRRLGS-GCGYGGY-GYGSGFGGYGYGSGF- 59
G++ GG G +G GG FGG G GYG G G R GS G G GGY G+G G YG G G+
Sbjct: 228 GNFGGGGGNFGRGGNFGGRG-GYGGGGGGSR--GSYGGGDGGYNGFGGDGGNYGGGPGYS 284
Query: 60 -------GGYGYGCYRPSYYGGYGFSGF 80
GG GYG Y GG G+ G+
Sbjct: 285 SRGGYGGGGPGYGNQGGGYGGGGGYDGY 312
Score = 39.3 bits (90), Expect = 7e-04
Identities = 30/63 (47%), Positives = 31/63 (49%), Gaps = 12/63 (19%)
Query: 5 GSYYGGLGYGCGG----FGGLG------YGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG 54
G +GG YG GG FG YG G GSF SG YGG GYGSG G G
Sbjct: 315 GGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKG-GSFGGRSSGSPYGG-GYGSGGGSGG 372
Query: 55 YGS 57
YGS
Sbjct: 373 YGS 375
>gi|109148552 keratin 3 [Homo sapiens]
Length = 628
Score = 55.1 bits (131), Expect = 1e-08
Identities = 36/76 (47%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYG 63
+GS YGG G+G GGFGG G G G G G G G+GG G G GG+G GFGG G
Sbjct: 97 FGSGYGG-GFG-GGFGG-GRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGGSGGFGGPG 153
Query: 64 YGCYRPSYYGGYGFSG 79
P +G GF G
Sbjct: 154 -SLGSPGGFGPGGFPG 168
Score = 54.3 bits (129), Expect = 2e-08
Identities = 35/82 (42%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGG 61
++ G Y GG G G GG G G G+G G G G G+GG G G GG+G GFGG
Sbjct: 88 AFAGGYGGGFGSGYGG--GFGGGFGGGRGMGGGFGGAGGFGGAGGFGGAGGFGGPGGFGG 145
Query: 62 YGYGCYRPSYY---GGYGFSGF 80
G G P GG+G GF
Sbjct: 146 SG-GFGGPGSLGSPGGFGPGGF 166
Score = 52.4 bits (124), Expect = 8e-08
Identities = 38/77 (49%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGF-GGYG 63
G Y GG G G G GGLG G+ G GS G G GG G G GFG G SGF GG G
Sbjct: 536 GGYGGGYGGGMG--GGLGGGFSAGGGSGSGFGRG---GGGGIGGGFG--GGSSGFSGGSG 588
Query: 64 YGCYRPSYYG--GYGFS 78
+G + YG G GFS
Sbjct: 589 FGSISGARYGVSGGGFS 605
Score = 50.8 bits (120), Expect = 2e-07
Identities = 37/81 (45%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 5 GSYYGGLGYG------CGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSG 58
GS GG G G GG+GG G+G G G G G G G GG G+G G GG+G G
Sbjct: 74 GSRAGGFGGGRSSCAFAGGYGG-GFGSGYGGGFGGGFGGGRGMGG-GFG-GAGGFGGAGG 130
Query: 59 FGGYGYGCYRPSYYGGYGFSG 79
FGG G G P +GG G G
Sbjct: 131 FGGAG-GFGGPGGFGGSGGFG 150
Score = 46.6 bits (109), Expect = 4e-06
Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 3 YYGSYYGGLGYGCGGF----GGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFG---GYGY 55
Y G Y GG+G G GG GG G G+G G G G G G G+ GSGFG G Y
Sbjct: 538 YGGGYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSGGSGFGSISGARY 597
Query: 56 GSGFGGY 62
G GG+
Sbjct: 598 GVSGGGF 604
Score = 42.0 bits (97), Expect = 1e-04
Identities = 34/92 (36%), Positives = 39/92 (42%), Gaps = 32/92 (34%)
Query: 16 GGFGGLGYGYGCGCGSF----------------------RRLG------SGCGYGGYGYG 47
GG GG YG+ G G F R G S C + G GYG
Sbjct: 36 GGAGGGAYGFRSGAGGFGSRSLYNLGGNKSISISVAAGGSRAGGFGGGRSSCAFAG-GYG 94
Query: 48 SGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
GFG GYG GFGG G+G R GG+G +G
Sbjct: 95 GGFGS-GYGGGFGG-GFGGGR-GMGGGFGGAG 123
Score = 41.6 bits (96), Expect = 1e-04
Identities = 29/66 (43%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGG---------YGY 55
G + GG G G GGFGG G G+G G G F G G GG+G GFGG +G
Sbjct: 107 GGFGGGRGMG-GGFGGAG-GFG-GAGGFGGAGGFGGPGGFGGSGGFGGPGSLGSPGGFGP 163
Query: 56 GSGFGG 61
G GG
Sbjct: 164 GGFPGG 169
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 10 GLGYGCGGFGGLGYGYGCGCGSFRRLGSGCG-YGGYGYGSGFGGYGYGSGFGG 61
G G+G GG GG+G G+G G F GSG G G YG GG+ S GG
Sbjct: 561 GSGFGRGGGGGIGGGFGGGSSGFSG-GSGFGSISGARYGVSGGGFSSASNRGG 612
Score = 33.9 bits (76), Expect = 0.029
Identities = 25/53 (47%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 37 SGCGYGGYGYGSGFG---------GYGYGSGFGGYGYGCYRPSYYGG-YGFSG 79
S GYGG GYG G G G G GSGFG G G + GG GFSG
Sbjct: 534 SAGGYGG-GYGGGMGGGLGGGFSAGGGSGSGFGRGGGGGIGGGFGGGSSGFSG 585
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 9 GGLGYGCGGFGGLGYGY--GCGCGSFRRLGSGCGYGGYGYGSGFGG 52
GG G G GGFGG G+ G G GS G GG+ S GG
Sbjct: 568 GGGGIG-GGFGGGSSGFSGGSGFGSISGARYGVSGGGFSSASNRGG 612
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 54.3 bits (129), Expect = 2e-08
Identities = 34/75 (45%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGY 64
GS+ GG G G G G G G+G G G SG GYGG G G G GYG G G+
Sbjct: 467 GSFGGGYGGGSSGGGSSGGGHGGGHGG----SSGGGYGGGSSGGGSSGGGYGGGSSSGGH 522
Query: 65 GCYRPSYYGGYGFSG 79
G YGG G SG
Sbjct: 523 GGSSSGGYGG-GSSG 536
Score = 52.4 bits (124), Expect = 8e-08
Identities = 36/75 (48%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGY 64
GS GG G G GG G GYG G G G GGYG GS GG+G GS GGYG
Sbjct: 481 GSSGGGHGGGHGGSSGGGYGGGSS-------GGGSSGGGYGGGSSSGGHG-GSSSGGYGG 532
Query: 65 GCYRPSYYGGYGFSG 79
G S GG G+ G
Sbjct: 533 G---SSGGGGGGYGG 544
Score = 51.2 bits (121), Expect = 2e-07
Identities = 39/90 (43%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 9 GGLGYGCGGFGG------------LGYGYGCGC---GSFRRLGSGCG-YGGY--GYGSGF 50
GG G GCGG GG LG G+ G GSF R SG G +GG GYG G
Sbjct: 19 GGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYG-GL 77
Query: 51 GGYGYGSGFGGYGYGCYRPSYYGGYGFSGF 80
GG+G GS G YG + SY G +G F
Sbjct: 78 GGFGGGSFRGSYGSSSFGGSYGGSFGGGSF 107
Score = 51.2 bits (121), Expect = 2e-07
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 5 GSYYGG-LGYGCGGFGGLG-YGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGF--- 59
GS GG G GG+GGLG +G G GS+ G YGG G FGG +G G
Sbjct: 60 GSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGG 119
Query: 60 GGYGYGCYRPSYYGGYGFSG 79
GG+G G + + GG+G G
Sbjct: 120 GGFGGGGFGGGFGGGFGGDG 139
Score = 49.7 bits (117), Expect = 5e-07
Identities = 36/73 (49%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYG-SGFGGYGYGSGFGGYG 63
GS GG G G G G G GYG G S GS G GYG G SG GG GYG G G G
Sbjct: 493 GSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSG--GYGGGSSGGGGGGYGGGSSGGG 550
Query: 64 YGCYRPSYYGGYG 76
S GGYG
Sbjct: 551 -----SSSGGGYG 558
Score = 49.3 bits (116), Expect = 7e-07
Identities = 36/78 (46%), Positives = 38/78 (48%), Gaps = 16/78 (20%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGY---GYGSGF-------GGYGYGSG 58
GG G G G FGG GYG G G G G G+GG GYG G GGYG GS
Sbjct: 460 GGGGRGGGSFGG-GYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSS 518
Query: 59 FGGYGYGCYRPSYYGGYG 76
GG+G S GGYG
Sbjct: 519 SGGHG-----GSSSGGYG 531
Score = 44.3 bits (103), Expect = 2e-05
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGC-GCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFG 60
SY S +GG YG G FGG +G G G GSF G G+GG G+G GFGG G+G G G
Sbjct: 88 SYGSSSFGG-SYG-GSFGGGSFGGGSFGGGSF----GGGGFGGGGFGGGFGG-GFG-GDG 139
Query: 61 G 61
G
Sbjct: 140 G 140
Score = 42.7 bits (99), Expect = 6e-05
Identities = 32/85 (37%), Positives = 36/85 (42%), Gaps = 23/85 (27%)
Query: 16 GGFGGLGYGYGCGCGSFR------RLGSGCGYGGYG-------------YGSGFGGYGYG 56
GG GG G G G G S R LG G GG+ +G GGYG
Sbjct: 18 GGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYG-- 75
Query: 57 SGFGGYGYGCYRPSYYGGYGFSGFY 81
G GG+G G +R S YG F G Y
Sbjct: 76 -GLGGFGGGSFRGS-YGSSSFGGSY 98
Score = 39.7 bits (91), Expect = 5e-04
Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Query: 20 GLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
G G G G GSF G GYGG G G G G+G G GG G Y GG G
Sbjct: 457 GSSGGGGRGGGSF-----GGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGG 511
Query: 80 FY 81
Y
Sbjct: 512 GY 513
Score = 38.9 bits (89), Expect = 9e-04
Identities = 30/78 (38%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 5 GSYYGGL---GYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGF-G 60
G Y GG G+G GG G G SG G GGYG GS GG G G+ G
Sbjct: 511 GGYGGGSSSGGHGGSSSGGYGGG-----------SSGGGGGGYGGGSSGGGSSSGGGYGG 559
Query: 61 GYGYGCYRPSYYGGYGFS 78
G G ++ S G G S
Sbjct: 560 GSSSGGHKSSSSGSVGES 577
Score = 32.3 bits (72), Expect = 0.083
Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSG 38
S+ G +GG G+G GGFGG G+G G G L SG
Sbjct: 111 SFGGGSFGGGGFGGGGFGG---GFGGGFGGDGGLLSG 144
Score = 32.3 bits (72), Expect = 0.083
Identities = 23/52 (44%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 28 GCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
G GS G G G G GYG G G G G G G+G YGG G SG
Sbjct: 455 GEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGG-GSSG 505
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 9/58 (15%)
Query: 31 SFRRLGSGCGYGGYGYGSGF---------GGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
S R G G G GG G G G G G G GG+ G + GG F G
Sbjct: 12 SSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGG 69
Score = 26.6 bits (57), Expect = 4.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 9 GGLGYGCGGFGG---LGYGYGCGCGSFRRLGSGCGYGGYGYGSG 49
GG GYG G GG G GYG G S S G G G
Sbjct: 538 GGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKG 581
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 53.9 bits (128), Expect = 3e-08
Identities = 36/70 (51%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 2 SYYGSYYGGLGYGC------GGFGG--LGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGY 53
S+ SY GG G G GGFGG G+G G G G G G+GG G G GFGG
Sbjct: 68 SFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGG-GSGGGFGG- 125
Query: 54 GYGSGFGGYG 63
GYGSGFGG+G
Sbjct: 126 GYGSGFGGFG 135
Score = 53.1 bits (126), Expect = 5e-08
Identities = 31/61 (50%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 2 SYYGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG-YGSGFG 60
S G +GG G GG G GY G G GSG G+GG GYGSGFGG+G +G G G
Sbjct: 84 SSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGG-GYGSGFGGFGGFGGGAG 142
Query: 61 G 61
G
Sbjct: 143 G 143
Score = 52.8 bits (125), Expect = 6e-08
Identities = 39/83 (46%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGG-----YGYGSGFGGY---GYG 56
GSY GG G G GG G GYG G G GSG G+ G YG GSG GG GYG
Sbjct: 518 GSYGGGSGSG----GGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYG 573
Query: 57 SGFGGYGYGCYRPSYYGGYGFSG 79
G G G S+ GG GF G
Sbjct: 574 GGSGSRGGS--GGSHGGGSGFGG 594
Score = 52.0 bits (123), Expect = 1e-07
Identities = 38/74 (51%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 5 GSYYGGLGYGCGG-FGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFG-GYGYGSGFGGY 62
GSY G G GG +GG G G G G GS R GSG YGG G GSG G G GYG G GG
Sbjct: 483 GSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGG-GSGSGGGSGGGYGGGSGGG 541
Query: 63 GYGCYRPSYYGGYG 76
G + GG G
Sbjct: 542 HSGGSGGGHSGGSG 555
Score = 50.8 bits (120), Expect = 2e-07
Identities = 39/80 (48%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGS--GFGG-YGYGSGFGG 61
G + GG G G G G YG G G G GSG GYGG G GS G GG +G GSGFGG
Sbjct: 540 GGHSGGSGGGHSGGSGGNYGGGSGSGG----GSGGGYGG-GSGSRGGSGGSHGGGSGFGG 594
Query: 62 -----YGYGCYRPSYYGGYG 76
YG G GGYG
Sbjct: 595 ESGGSYGGGEEASGSGGGYG 614
Score = 50.4 bits (119), Expect = 3e-07
Identities = 41/92 (44%), Positives = 44/92 (47%), Gaps = 25/92 (27%)
Query: 7 YYGGLGYGCG--GFGGLGYGYGCGCG---SFRRLGSGCGYG----------GY----GYG 47
Y GG CG G G GY YG G G S LG G G G GY G+G
Sbjct: 53 YGGGSSRVCGRGGGGSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFG 112
Query: 48 SGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
GFGG G G GFGG GYG S +GG+G G
Sbjct: 113 GGFGG-GSGGGFGG-GYG----SGFGGFGGFG 138
Score = 49.7 bits (117), Expect = 5e-07
Identities = 37/75 (49%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGY 64
G GG G G G GG G YG G GS G G G GGYG GSG GG+ GSG GG+
Sbjct: 500 GGSGGGYGGGSGSRGGSGGSYGGGSGS----GGGSG-GGYGGGSG-GGHSGGSG-GGHSG 552
Query: 65 GCYRPSYYGGYGFSG 79
G +Y GG G G
Sbjct: 553 GS-GGNYGGGSGSGG 566
Score = 48.9 bits (115), Expect = 9e-07
Identities = 29/67 (43%), Positives = 33/67 (49%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGY 64
G+Y GG G G G GG G G G GS G G G+GG GS GG GGYG
Sbjct: 556 GNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGSGGGYGG 615
Query: 65 GCYRPSY 71
G + S+
Sbjct: 616 GSGKSSH 622
Score = 47.8 bits (112), Expect = 2e-06
Identities = 35/78 (44%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 14 GCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGG-----------YGYGSGFGGY 62
G GG GG G YG G R GSG YGG G G G+GG YG GSG GG
Sbjct: 474 GLGGRGGSGGSYGRGS----RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGG 529
Query: 63 GYGCYRPSYYGGY-GFSG 79
G Y GG+ G SG
Sbjct: 530 SGGGYGGGSGGGHSGGSG 547
Score = 42.0 bits (97), Expect = 1e-04
Identities = 25/53 (47%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGG 61
G G G GG G G+G G G G G G+GG+G GFGG G G G GG
Sbjct: 99 GASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFGGFG---GFGG-GAGGGDGG 147
Score = 40.4 bits (93), Expect = 3e-04
Identities = 30/65 (46%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 14 GCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSG--FGGYGYGCYRPSY 71
G GG GGLG G G S+ R S G GG G S GYG GS G G G + SY
Sbjct: 15 GGGGGGGLGSG-GSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGSFGYSY 73
Query: 72 YGGYG 76
GG G
Sbjct: 74 GGGSG 78
Score = 39.7 bits (91), Expect = 5e-04
Identities = 39/129 (30%), Positives = 44/129 (34%), Gaps = 50/129 (38%)
Query: 2 SYYGSYYGGLGYGCG----------------------------GFGG------------- 20
SY GG G G G G+GG
Sbjct: 9 SYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSRVCGRGGGGS 68
Query: 21 LGYGYGCGCG---SFRRLGSGCGYGGYGYGSGFGG-----YGYGSGFGGYGYGCYRPSYY 72
GY YG G G S LG G G G G+G GG G+G GFGG G + Y
Sbjct: 69 FGYSYGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYG 128
Query: 73 GGY-GFSGF 80
G+ GF GF
Sbjct: 129 SGFGGFGGF 137
Score = 38.1 bits (87), Expect = 0.002
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYG 45
G + GG G G GG G G GYG G G F G G G G G
Sbjct: 109 GGFGGGFGGGSGG--GFGGGYGSGFGGFGGFGGGAGGGDGG 147
Score = 32.7 bits (73), Expect = 0.064
Identities = 26/60 (43%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
Query: 28 GCGSFRRLGSGCGYGGYGYGS--GFGG-YGYGSGFGGYGYGC-----YRPSYYGGYGFSG 79
G G G G G YG GS G GG YG G GGYG G SY GG G G
Sbjct: 469 GAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGG 528
>gi|14043070 heterogeneous nuclear ribonucleoprotein A1 isoform b
[Homo sapiens]
Length = 372
Score = 53.5 bits (127), Expect = 3e-08
Identities = 36/74 (48%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG-YGSGFGGYG 63
G YGG G G GFG G GYG G G G G GYGSG GYG GSG+GG G
Sbjct: 234 GGGYGGSGDGYNGFGNDG-GYGGG-------GPGYSGGSRGYGSGGQGYGNQGSGYGGSG 285
Query: 64 -YGCYRPSYYGGYG 76
Y Y GG+G
Sbjct: 286 SYDSYNNGGGGGFG 299
Score = 52.4 bits (124), Expect = 8e-08
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 9 GGLGYGCGGFGGL--GYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGC 66
GG G GGFGG G GYG + G+ GYGG G G G GYGSG G GYG
Sbjct: 219 GGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGGGPGYSGGSRGYGSG--GQGYG- 275
Query: 67 YRPSYYGGYGFSGFY 81
+ GYG SG Y
Sbjct: 276 ---NQGSGYGGSGSY 287
Score = 48.5 bits (114), Expect = 1e-06
Identities = 34/75 (45%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 14 GCGGFGG-LGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG-YGSGFGGYG----YGCY 67
G G FGG G G+G G +F R G+ G GG+G G GGYG G G+ G+G YG
Sbjct: 198 GSGNFGGGRGGGFG-GNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGGYGGG 256
Query: 68 RPSYYG---GYGFSG 79
P Y G GYG G
Sbjct: 257 GPGYSGGSRGYGSGG 271
Score = 44.7 bits (104), Expect = 2e-05
Identities = 38/100 (38%), Positives = 43/100 (43%), Gaps = 32/100 (32%)
Query: 9 GGLGYGCGG--FGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSG--FGGYGY--------- 55
G GYG GG +G G GYG G GS+ +G G GG+G GSG FGG G
Sbjct: 263 GSRGYGSGGQGYGNQGSGYG-GSGSYDSYNNGGG-GGFGGGSGSNFGGGGSYNDFGNYNN 320
Query: 56 ---------GSGFGGYGYGCY--------RPSYYGGYGFS 78
G FGG G Y +P GGYG S
Sbjct: 321 QSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGS 360
Score = 43.5 bits (101), Expect = 4e-05
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 21/93 (22%)
Query: 9 GGLGYGCG--GFGGLGYGYG------CGCGSFRRL--GSGCGYGGYGYGSGFGGYGYGSG 58
GG GY G G+G G GYG G GS+ G G G+GG G GS FGG G +
Sbjct: 256 GGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGFGG-GSGSNFGGGGSYND 314
Query: 59 FGGY-----GYGCYRPSYYGG-----YGFSGFY 81
FG Y +G + +GG YG G Y
Sbjct: 315 FGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQY 347
Score = 35.8 bits (81), Expect = 0.008
Identities = 29/77 (37%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 7 YYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGG---YGYGSGFGGY- 62
Y+ G+ C L S +R SG G G G G GFGG +G G F G
Sbjct: 167 YHTVNGHNCEVRKALSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRG 226
Query: 63 GYGCYRPSYYGGYGFSG 79
G+G R GGYG SG
Sbjct: 227 GFGGSRGG--GGYGGSG 241
Score = 26.2 bits (56), Expect = 6.0
Identities = 29/95 (30%), Positives = 31/95 (32%), Gaps = 40/95 (42%)
Query: 5 GSYYGGLG----YGCGGFGGLGYGYGC---GCGSFRRLGS-------------------- 37
GS YGG G Y GG GG G G G G GS+ G+
Sbjct: 278 GSGYGGSGSYDSYNNGGGGGFGGGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRS 337
Query: 38 ------GCGY-------GGYGYGSGFGGYGYGSGF 59
G Y GGYG S YG G F
Sbjct: 338 SGPYGGGGQYFAKPRNQGGYGGSSSSSSYGSGRRF 372
>gi|5803036 heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 53.5 bits (127), Expect = 3e-08
Identities = 36/91 (39%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 10 GLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYG--------YG---SG 58
G G G +GG G G G G ++ G G YGG YG+GFGG+G YG SG
Sbjct: 212 GGGGGYNSYGGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSG 271
Query: 59 FGGYGYGC----------YRPSYYGGYGFSG 79
GG G G YR Y GG G+ G
Sbjct: 272 GGGGGGGSSWGGRSNSGPYRGGYGGGGGYGG 302
Score = 48.9 bits (115), Expect = 9e-07
Identities = 34/87 (39%), Positives = 38/87 (43%), Gaps = 16/87 (18%)
Query: 3 YYGSYYGGLGYGCGGFGGLG-----------YGYGCGCGSFRRLGSGCG-----YGGYGY 46
Y G GG GG GG G G G G S+ G G G YGG G
Sbjct: 180 YSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYGGGGG 239
Query: 47 GSGFGGYGYGSGFGGYGYGCYRPSYYG 73
GS +GG YG+GFGG+G S YG
Sbjct: 240 GSSYGGSDYGNGFGGFGSYSQHQSSYG 266
Score = 43.5 bits (101), Expect = 4e-05
Identities = 34/77 (44%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGF-GGYG 63
GS YGG YG GFGG G Y S+ + S G GG G GS +GG + GGYG
Sbjct: 240 GSSYGGSDYG-NGFGGFG-SYSQHQSSYGPMKS--GGGGGGGGSSWGGRSNSGPYRGGYG 295
Query: 64 YGCYRPSYYGGYGFSGF 80
G GGYG S F
Sbjct: 296 GG-------GGYGGSSF 305
Score = 28.9 bits (63), Expect = 0.92
Identities = 20/54 (37%), Positives = 20/54 (37%)
Query: 26 GCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSG 79
G G G R G G G G G G G G G YG Y GGY G
Sbjct: 182 GGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGGGGGYNSYGGYGGGGGGGYNAYG 235
>gi|122891874 keratin associated protein 5-5 [Homo sapiens]
Length = 237
Score = 52.8 bits (125), Expect = 6e-08
Identities = 33/62 (53%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 9 GGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYG-SGFGGYGYGCY 67
GG G GCGG G G G GCG GSGCG G G G G GG G G +G GG G GC
Sbjct: 8 GGCGSGCGGRGSGCGGCGSGCGG---CGSGCGGCGSGCG-GCGGCGSGCAGCGGCGSGCC 63
Query: 68 RP 69
P
Sbjct: 64 VP 65
Score = 43.5 bits (101), Expect = 4e-05
Identities = 24/44 (54%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 5 GSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGC-GYGGYGYG 47
GS GG G GCGG G G G GCG GSGC G GG G G
Sbjct: 18 GSGCGGCGSGCGGCGSGCGGCGSGCGGCGGCGSGCAGCGGCGSG 61
Score = 37.0 bits (84), Expect = 0.003
Identities = 21/40 (52%), Positives = 21/40 (52%), Gaps = 8/40 (20%)
Query: 27 CGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGC 66
CGC GCG G G GSG GG G SG GG G GC
Sbjct: 4 CGCSG------GCGSGCGGRGSGCGGCG--SGCGGCGSGC 35
Score = 32.0 bits (71), Expect = 0.11
Identities = 29/98 (29%), Positives = 30/98 (30%), Gaps = 36/98 (36%)
Query: 5 GSYYGGLGYGCGGFGGLGYGY-----------------------------------GCG- 28
GS GG G GCGG GG G G GCG
Sbjct: 32 GSGCGGCGSGCGGCGGCGSGCAGCGGCGSGCCVPVCCCKPMCCCVPACSCSSCGKGGCGS 91
Query: 29 CGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGC 66
CG +R CG GS G G GG GC
Sbjct: 92 CGGSKRGCVSCGVSKGACGSCGGSKGGCGSCGGSKGGC 129
Score = 29.6 bits (65), Expect = 0.54
Identities = 27/69 (39%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 9 GGLGYGC-------GGFGGLGYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGG 61
GG GC G G G G GCGS GCG G G G G G GS G
Sbjct: 93 GGSKRGCVSCGVSKGACGSCGGSKG-GCGSCGGSKGGCGSCG-GSKGGCGSCG-GSKGGC 149
Query: 62 YGYGCYRPS 70
YGC + S
Sbjct: 150 GSYGCSQSS 158
Score = 26.6 bits (57), Expect = 4.6
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Query: 15 CGGFGGLGYGYGCG-CGSFRRLGSGCGYGGYGYGSGFGGYGYGSGFGGYGYGCYRP 69
CGG G GCG CG + CG G GS G G +G C +P
Sbjct: 112 CGGSKG-----GCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSYGCSQSSCCKP 162
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 52.4 bits (124), Expect = 8e-08
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGG-YGYGSGFGG---YGYGSGF 59
YG GG G GG+GG GYG G + S GYGG G GSG+GG GYG
Sbjct: 491 YGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 550
Query: 60 GGYGYGCYRPSYYGG 74
G GYG R YGG
Sbjct: 551 SGGGYGGDRGGGYGG 565
Score = 49.3 bits (116), Expect = 7e-07
Identities = 37/81 (45%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGC-----GCGSFRRLGSGCGYGGY---GYGSGFGGYGY 55
YG GG G GG+GG GYG G G R G G GYGG GYG G GY
Sbjct: 498 YGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDR--GGGSGYGGDRSGGYGGDRSGGGY 555
Query: 56 GSGFGGYGYGCYRPSYYGGYG 76
G GG GYG R Y G G
Sbjct: 556 GGDRGG-GYGGDRGGYGGKMG 575
Score = 48.9 bits (115), Expect = 9e-07
Identities = 38/90 (42%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 3 YYGSYYGGLGYGCGGFGG-LGYGYGCGCGSFRRLGSGCGYGGY--GYGSGFGGYGYGSGF 59
Y G GG G GG+GG G GYG G + G GYGG GYG GGYG
Sbjct: 468 YGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG--GDRGGYGGDRGGYGGDRGGYGGDRSR 525
Query: 60 GGY--------GYGCYRPSYYGGYGFSGFY 81
GGY GYG R YGG G Y
Sbjct: 526 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGY 555
Score = 48.1 bits (113), Expect = 1e-06
Identities = 38/87 (43%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYG--YGSGFGG--YGYGSGF 59
YG G GYG GG G G G G R G G GGYG G G+GG GYG
Sbjct: 443 YGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDR 502
Query: 60 GGY-----GYGCYRPSY-----YGGYG 76
GGY GYG R Y GGYG
Sbjct: 503 GGYGGDRGGYGGDRGGYGGDRSRGGYG 529
Score = 47.0 bits (110), Expect = 3e-06
Identities = 35/79 (44%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 YYGSYYGG-LGY-GCGGFGGLGYGYG---CGCGSFRRLGSGCGYGGYGYGSGFGGYGYGS 57
+ G YGG GY G GG GG GYG G G SG GY G G G+GG G
Sbjct: 391 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 450
Query: 58 GFGGYGYGCYRPSYYGGYG 76
G+GG G Y GGYG
Sbjct: 451 GYGGDRGGGYGGDRGGGYG 469
Score = 45.8 bits (107), Expect = 7e-06
Identities = 34/74 (45%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 9 GGLGYGCGGFGG--LGYGYG---CGCGSFRRLGSGCGYGGYGYGSGFGGY---GYGSGFG 60
GG G GG+GG G GYG G + SG GYGG G G+GG GYG G
Sbjct: 406 GGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRG 465
Query: 61 GYGYGCYRPSYYGG 74
G GYG R YGG
Sbjct: 466 G-GYGGDRGGGYGG 478
Score = 44.3 bits (103), Expect = 2e-05
Identities = 40/83 (48%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 3 YYGSYYGGLGYGCGGFGGLGYG--YGCGCGSFRRLGSGCGYGGYGYGSGFGGYG--YGSG 58
Y G GG GYG GG GYG G G G R G G GG GYG GGYG G G
Sbjct: 434 YSGDRSGG-GYGGDRSGG-GYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGYGGDRGGG 490
Query: 59 FGG--YGYGCYRPSY---YGGYG 76
+GG GYG R Y GGYG
Sbjct: 491 YGGDRGGYGGDRGGYGGDRGGYG 513
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 16 GGFGGLGYGYGCGC-GSFRRLGSGCGYGGYGYGSGFGGY-----GYGSGFGGYGYGCYRP 69
G F G GYG G G R G GYGG G G+GG GY G GYG R
Sbjct: 389 GDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRS 448
Query: 70 SYYGGYG 76
GGYG
Sbjct: 449 G--GGYG 453
Score = 37.4 bits (85), Expect = 0.003
Identities = 38/88 (43%), Positives = 39/88 (44%), Gaps = 18/88 (20%)
Query: 5 GSYYGGLGYGCGGFGG--LGYGYG---CGCGSFRRLGSGCGY---GGYGYGSGFGGY--- 53
G YGG GG+ G G GYG G G G G G GGYG G GGY
Sbjct: 421 GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRG-GGYGGD 479
Query: 54 --GYGSGFGGYGYGCYRPSY---YGGYG 76
GYG GG GYG R Y GGYG
Sbjct: 480 RGGYGGDRGG-GYGGDRGGYGGDRGGYG 506
Score = 35.0 bits (79), Expect = 0.013
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Query: 22 GYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGY-----------------GYGSGFGGYGY 64
G GYG G R G G GGYG GGY GYG G GY
Sbjct: 393 GRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY 452
Query: 65 GCYRPSYYGGYGFSGF 80
G R YGG G+
Sbjct: 453 GGDRGGGYGGDRGGGY 468
Score = 27.7 bits (60), Expect = 2.1
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 30 GSFRRLGSGCGYGGY----GYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
G FR G G G GY G G GGYG GGYG Y G G Y
Sbjct: 389 GDFRGRGYG-GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGY 443
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 52.4 bits (124), Expect = 8e-08
Identities = 35/75 (46%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGG-YGYGSGFGG---YGYGSGF 59
YG GG G GG+GG GYG G + S GYGG G GSG+GG GYG
Sbjct: 494 YGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGDRSGGYGGDR 553
Query: 60 GGYGYGCYRPSYYGG 74
G GYG R YGG
Sbjct: 554 SGGGYGGDRGGGYGG 568
Score = 49.3 bits (116), Expect = 7e-07
Identities = 37/81 (45%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGC-----GCGSFRRLGSGCGYGGY---GYGSGFGGYGY 55
YG GG G GG+GG GYG G G R G G GYGG GYG G GY
Sbjct: 501 YGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDR--GGGSGYGGDRSGGYGGDRSGGGY 558
Query: 56 GSGFGGYGYGCYRPSYYGGYG 76
G GG GYG R Y G G
Sbjct: 559 GGDRGG-GYGGDRGGYGGKMG 578
Score = 48.9 bits (115), Expect = 9e-07
Identities = 38/90 (42%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 3 YYGSYYGGLGYGCGGFGG-LGYGYGCGCGSFRRLGSGCGYGGY--GYGSGFGGYGYGSGF 59
Y G GG G GG+GG G GYG G + G GYGG GYG GGYG
Sbjct: 471 YGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYG--GDRGGYGGDRGGYGGDRGGYGGDRSR 528
Query: 60 GGY--------GYGCYRPSYYGGYGFSGFY 81
GGY GYG R YGG G Y
Sbjct: 529 GGYGGDRGGGSGYGGDRSGGYGGDRSGGGY 558
Score = 48.1 bits (113), Expect = 1e-06
Identities = 38/87 (43%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 4 YGSYYGGLGYGCGGFGGLGYGYGCGCGSFRRLGSGCGYGGYG--YGSGFGG--YGYGSGF 59
YG G GYG GG G G G G R G G GGYG G G+GG GYG
Sbjct: 446 YGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDR 505
Query: 60 GGY-----GYGCYRPSY-----YGGYG 76
GGY GYG R Y GGYG
Sbjct: 506 GGYGGDRGGYGGDRGGYGGDRSRGGYG 532
Score = 47.0 bits (110), Expect = 3e-06
Identities = 35/79 (44%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 3 YYGSYYGG-LGY-GCGGFGGLGYGYG---CGCGSFRRLGSGCGYGGYGYGSGFGGYGYGS 57
+ G YGG GY G GG GG GYG G G SG GY G G G+GG G
Sbjct: 394 FRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGG 453
Query: 58 GFGGYGYGCYRPSYYGGYG 76
G+GG G Y GGYG
Sbjct: 454 GYGGDRGGGYGGDRGGGYG 472
Score = 45.8 bits (107), Expect = 7e-06
Identities = 34/74 (45%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 9 GGLGYGCGGFGG--LGYGYG---CGCGSFRRLGSGCGYGGYGYGSGFGGY---GYGSGFG 60
GG G GG+GG G GYG G + SG GYGG G G+GG GYG G
Sbjct: 409 GGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRG 468
Query: 61 GYGYGCYRPSYYGG 74
G GYG R YGG
Sbjct: 469 G-GYGGDRGGGYGG 481
Score = 44.3 bits (103), Expect = 2e-05
Identities = 40/83 (48%), Positives = 41/83 (49%), Gaps = 12/83 (14%)
Query: 3 YYGSYYGGLGYGCGGFGGLGYG--YGCGCGSFRRLGSGCGYGGYGYGSGFGGYG--YGSG 58
Y G GG GYG GG GYG G G G R G G GG GYG GGYG G G
Sbjct: 437 YSGDRSGG-GYGGDRSGG-GYGGDRGGGYGGDRGGGYGGDRGG-GYGGDRGGYGGDRGGG 493
Query: 59 FGG--YGYGCYRPSY---YGGYG 76
+GG GYG R Y GGYG
Sbjct: 494 YGGDRGGYGGDRGGYGGDRGGYG 516
Score = 37.4 bits (85), Expect = 0.003
Identities = 29/67 (43%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 16 GGFGGLGYGYGCGC-GSFRRLGSGCGYGGYGYGSGFGGY-----GYGSGFGGYGYGCYRP 69
G F G GYG G G R G GYGG G G+GG GY G GYG R
Sbjct: 392 GDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRS 451
Query: 70 SYYGGYG 76
GGYG
Sbjct: 452 G--GGYG 456
Score = 37.4 bits (85), Expect = 0.003
Identities = 38/88 (43%), Positives = 39/88 (44%), Gaps = 18/88 (20%)
Query: 5 GSYYGGLGYGCGGFGG--LGYGYG---CGCGSFRRLGSGCGY---GGYGYGSGFGGY--- 53
G YGG GG+ G G GYG G G G G G GGYG G GGY
Sbjct: 424 GGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRG-GGYGGD 482
Query: 54 --GYGSGFGGYGYGCYRPSY---YGGYG 76
GYG GG GYG R Y GGYG
Sbjct: 483 RGGYGGDRGG-GYGGDRGGYGGDRGGYG 509
Score = 35.0 bits (79), Expect = 0.013
Identities = 27/76 (35%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Query: 22 GYGYGCGCGSFRRLGSGCGYGGYGYGSGFGGY-----------------GYGSGFGGYGY 64
G GYG G R G G GGYG GGY GYG G GY
Sbjct: 396 GRGYGGERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGY 455
Query: 65 GCYRPSYYGGYGFSGF 80
G R YGG G+
Sbjct: 456 GGDRGGGYGGDRGGGY 471
Score = 27.7 bits (60), Expect = 2.1
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 30 GSFRRLGSGCGYGGY----GYGSGFGGYGYGSGFGGYGYGCYRPSYYGGYGFSGFY 81
G FR G G G GY G G GGYG GGYG Y G G Y
Sbjct: 392 GDFRGRGYG-GERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSGGGYSGDRSGGGY 446
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.162 0.587
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,476,307
Number of Sequences: 37866
Number of extensions: 262244
Number of successful extensions: 6350
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 1987
length of query: 81
length of database: 18,247,518
effective HSP length: 53
effective length of query: 28
effective length of database: 16,240,620
effective search space: 454737360
effective search space used: 454737360
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.