Guide to the Human Genome
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Name: KRTAP13-2 Sequence: fasta or formatted (175aa) NCBI GI: 31791006
Description:

keratin associated protein 13-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          3           1
 C cysteine           12.0         21           2
 D aspartate           1.1          2           1
 E glutamate           1.7          3           1
 F phenylalanine       3.4          6           1
 G glycine            11.4         20           1
 H histidine           0.0          0           0
 I isoleucine          0.6          1           1
 K lysine              0.6          1           1
 L leucine             6.9         12           2
 M methionine          0.6          1           1
 N asparagine          1.7          3           1
 P proline             6.3         11           1
 Q glutamine           2.9          5           1
 R arginine            7.4         13           1
 S serine             23.4         41           3
 T threonine           6.3         11           2
 V valine              2.3          4           1
 W tryptophan          0.6          1           1
 Y tyrosine            9.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 13-2 
KRTAP13-1             0.881   keratin associated protein 13-1 
KRTAP13-4             0.600   keratin associated protein 13-4 
KRTAP13-3             0.567   keratin associated protein 13-3 
KRTAP15-1             0.358   keratin associated protein 15-1 
KRTAP11-1             0.183   keratin associated protein 11-1 
KRTAP4-9              0.108   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.108   keratin associated protein 4-9 
KRTAP4-8              0.100   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.100   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-11             0.100   keratin associated protein 4-11 
KRTAP4-8              0.094   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.094   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-12             0.094   keratin associated protein 4-12 
KRTAP23-1             0.094   keratin associated protein 23-1 
LOC728341             0.094   PREDICTED: keratin-associated protein 9-2-like 1-li...
LOC728318             0.094   PREDICTED: hypothetical protein 
KRTAP4-8              0.092   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.092   PREDICTED: similar to keratin associated protein 4-...
LOC728318             0.092   PREDICTED: hypothetical protein 
LOC728318             0.092   PREDICTED: hypothetical protein 
KRTAP4-3              0.089   keratin associated protein 4-3 
KRTAP9-2              0.089   keratin associated protein 9.2 
KRTAP1-1              0.089   keratin associated protein 1-1 
KRTAP26-1             0.089   keratin associated protein 26-1 
KRTAP4-2              0.086   keratin associated protein 4-2 
KRTAP4-4              0.086   keratin associated protein 4.4 
KRTAP4-5              0.086   keratin associated protein 4-5 
KRTAP9-9              0.083   keratin associated protein 9-9 
KRTAP9-8              0.083   keratin associated protein 9.8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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