Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF445 Sequence: fasta or formatted (1031aa) NCBI GI: 31340735
Description:

zinc finger protein 445

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         53           2
 C cysteine            4.1         42           1
 D aspartate           3.9         40           2
 E glutamate           7.0         72           3
 F phenylalanine       4.3         44           1
 G glycine             6.1         63           2
 H histidine           5.3         55           2
 I isoleucine          2.4         25           1
 K lysine              8.5         88           3
 L leucine             8.2         85           2
 M methionine          1.3         13           1
 N asparagine          2.4         25           1
 P proline             4.8         49           2
 Q glutamine           6.4         66           2
 R arginine            8.2         85           2
 S serine              9.3         96           3
 T threonine           4.9         51           1
 V valine              3.4         35           1
 W tryptophan          1.6         17           2
 Y tyrosine            2.6         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 445 
ZNF197                0.274   zinc finger protein 197 isoform 1 
ZNF91                 0.238   zinc finger protein 91 
ZNF208                0.236   zinc finger protein 208 
ZNF160                0.229   zinc finger protein 160 
ZNF160                0.229   zinc finger protein 160 
ZNF160                0.229   zinc finger protein 160 
ZNF43                 0.224   zinc finger protein 43 
ZNF845                0.223   zinc finger protein 845 
ZNF99                 0.222   zinc finger protein 99 
ZNF347                0.219   zinc finger protein 347 
ZNF493                0.218   zinc finger protein 493 isoform 3 
ZNF624                0.217   zinc finger protein 624 
ZNF616                0.216   zinc finger protein 616 
ZNF780B               0.215   zinc finger protein 780B 
ZNF420                0.215   zinc finger protein 420 
ZNF268                0.215   zinc finger protein 268 
ZNF726                0.215   PREDICTED: zinc finger protein 726 
ZNF726                0.215   PREDICTED: zinc finger protein 726 
ZNF726                0.215   PREDICTED: zinc finger protein 726 
ZNF546                0.214   zinc finger protein 546 
ZNF585B               0.214   zinc finger protein 585B 
ZNF184                0.208   zinc finger protein 184 
LOC100292052          0.208   PREDICTED: similar to hCG1773661 
LOC100287226          0.208   PREDICTED: similar to hCG1773661 
LOC100287226          0.208   PREDICTED: hypothetical protein XP_002343677 
ZNF836                0.207   zinc finger protein 836 
ZNF665                0.207   zinc finger protein 665 
ZNF721                0.207   zinc finger protein 721 
LOC100287429          0.206   PREDICTED: hypothetical protein XP_002343926 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press