Guide to the Human Genome
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Name: ZNF197 Sequence: fasta or formatted (1029aa) NCBI GI: 11386193
Description:

zinc finger protein 197 isoform 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [267aa] zinc finger protein 197 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.5         36           2
 C cysteine            5.2         54           2
 D aspartate           3.1         32           2
 E glutamate           9.1         94           3
 F phenylalanine       3.7         38           1
 G glycine             6.1         63           1
 H histidine           5.9         61           2
 I isoleucine          4.5         46           2
 K lysine              9.9        102           3
 L leucine             8.1         83           3
 M methionine          1.3         13           1
 N asparagine          4.1         42           1
 P proline             3.9         40           2
 Q glutamine           5.2         54           2
 R arginine            5.7         59           2
 S serine              7.6         78           4
 T threonine           4.9         50           2
 V valine              4.1         42           2
 W tryptophan          1.2         12           1
 Y tyrosine            2.9         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 197 isoform 1 
ZNF268                0.348   zinc finger protein 268 
ZNF845                0.344   zinc finger protein 845 
ZNF160                0.344   zinc finger protein 160 
ZNF160                0.344   zinc finger protein 160 
ZNF160                0.344   zinc finger protein 160 
ZNF721                0.342   zinc finger protein 721 
ZNF91                 0.339   zinc finger protein 91 
ZNF585B               0.338   zinc finger protein 585B 
ZNF208                0.337   zinc finger protein 208 
ZNF546                0.335   zinc finger protein 546 
ZNF836                0.334   zinc finger protein 836 
ZNF616                0.334   zinc finger protein 616 
ZNF420                0.333   zinc finger protein 420 
ZNF814                0.332   zinc finger protein 814 
ZNF585A               0.331   zinc finger protein 585A 
ZNF585A               0.331   zinc finger protein 585A 
ZFP62                 0.331   zinc finger protein 62 homolog 
ZNF347                0.331   zinc finger protein 347 
ZNF808                0.331   zinc finger protein 808 
ZNF624                0.329   zinc finger protein 624 
LOC100292052          0.327   PREDICTED: similar to hCG1773661 
LOC100287226          0.327   PREDICTED: similar to hCG1773661 
LOC100287226          0.327   PREDICTED: hypothetical protein XP_002343677 
ZNF841                0.327   zinc finger protein 841 
ZNF43                 0.327   zinc finger protein 43 
ZNF780B               0.327   zinc finger protein 780B 
ZNF99                 0.325   zinc finger protein 99 
ZNF658                0.323   zinc finger protein 658 
ZNF167                0.321   zinc finger protein 167 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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