Guide to the Human Genome
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Name: ZNF43 Sequence: fasta or formatted (809aa) NCBI GI: 68303809
Description:

zinc finger protein 43

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         31           1
 C cysteine            6.8         55           1
 D aspartate           1.1          9           1
 E glutamate           9.4         76           2
 F phenylalanine       5.3         43           1
 G glycine             5.1         41           2
 H histidine           6.7         54           1
 I isoleucine          4.9         40           2
 K lysine             16.2        131           2
 L leucine             5.1         41           1
 M methionine          0.9          7           1
 N asparagine          4.8         39           1
 P proline             4.0         32           2
 Q glutamine           2.5         20           2
 R arginine            2.7         22           2
 S serine              5.7         46           2
 T threonine           8.5         69           2
 V valine              1.9         15           1
 W tryptophan          1.1          9           1
 Y tyrosine            3.6         29           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 43 
ZNF91                 0.653   zinc finger protein 91 
ZNF208                0.646   zinc finger protein 208 
ZNF99                 0.632   zinc finger protein 99 
ZNF493                0.612   zinc finger protein 493 isoform 3 
ZNF726                0.603   PREDICTED: zinc finger protein 726 
ZNF726                0.603   PREDICTED: zinc finger protein 726 
ZNF726                0.603   PREDICTED: zinc finger protein 726 
ZNF107                0.599   zinc finger protein 107 
ZNF107                0.599   zinc finger protein 107 
ZNF429                0.539   zinc finger protein 429 
ZNF681                0.535   zinc finger protein 681 
LOC100292052          0.535   PREDICTED: similar to hCG1773661 
LOC100287226          0.535   PREDICTED: similar to hCG1773661 
LOC100287226          0.535   PREDICTED: hypothetical protein XP_002343677 
ZNF728                0.531   PREDICTED: zinc finger protein 728 
ZNF728                0.530   PREDICTED: zinc finger protein 728 
ZNF728                0.530   PREDICTED: zinc finger protein 728 
ZNF254                0.528   zinc finger protein 254 
ZNF721                0.519   zinc finger protein 721 
ZNF85                 0.514   zinc finger protein 85 
ZNF493                0.513   zinc finger protein 493 isoform 1 
ZNF93                 0.498   zinc finger protein 93 
ZNF66                 0.495   PREDICTED: zinc finger protein 66 
ZNF66                 0.495   PREDICTED: zinc finger protein 66 
ZNF675                0.488   zinc finger protein 675 
ZNF595                0.486   zinc finger protein 595 
ZNF66                 0.482   PREDICTED: zinc finger protein 66 
ZNF92                 0.482   zinc finger protein 92 isoform 2 
ZNF737                0.478   PREDICTED: zinc finger protein 737 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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