Guide to the Human Genome
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Name: ZNF616 Sequence: fasta or formatted (781aa) NCBI GI: 49574543
Description:

zinc finger protein 616

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         25           2
 C cysteine            6.4         50           1
 D aspartate           1.7         13           1
 E glutamate           6.9         54           2
 F phenylalanine       3.8         30           1
 G glycine             6.8         53           1
 H histidine           8.1         63           1
 I isoleucine          3.8         30           2
 K lysine             11.1         87           2
 L leucine             5.5         43           2
 M methionine          0.3          2           1
 N asparagine          4.9         38           2
 P proline             2.9         23           2
 Q glutamine           4.5         35           1
 R arginine            7.4         58           2
 S serine              7.4         58           3
 T threonine           5.5         43           2
 V valine              5.8         45           2
 W tryptophan          0.4          3           1
 Y tyrosine            3.6         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 616 
ZNF841                0.679   zinc finger protein 841 
ZNF836                0.657   zinc finger protein 836 
ZNF347                0.568   zinc finger protein 347 
ZNF160                0.567   zinc finger protein 160 
ZNF160                0.567   zinc finger protein 160 
ZNF160                0.567   zinc finger protein 160 
ZNF845                0.536   zinc finger protein 845 
ZNF665                0.530   zinc finger protein 665 
ZNF761                0.510   zinc finger protein 761 
ZNF808                0.504   zinc finger protein 808 
ZNF208                0.481   zinc finger protein 208 
LOC388559             0.472   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.472   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.472   PREDICTED: hypothetical protein LOC388559 
ZNF91                 0.470   zinc finger protein 91 
ZNF43                 0.469   zinc finger protein 43 
ZNF99                 0.467   zinc finger protein 99 
ZNF624                0.464   zinc finger protein 624 
ZNF600                0.458   zinc finger protein 600 
ZNF546                0.455   zinc finger protein 546 
ZNF585B               0.448   zinc finger protein 585B 
LOC100292052          0.446   PREDICTED: similar to hCG1773661 
LOC100287226          0.446   PREDICTED: similar to hCG1773661 
LOC100287226          0.446   PREDICTED: hypothetical protein XP_002343677 
ZNF493                0.443   zinc finger protein 493 isoform 3 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF813                0.441   zinc finger protein 813 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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