Guide to the Human Genome
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Name: ZNF208 Sequence: fasta or formatted (1167aa) NCBI GI: 6005976
Description:

zinc finger protein 208

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         53           2
 C cysteine            6.3         74           1
 D aspartate           0.7          8           1
 E glutamate          10.5        122           2
 F phenylalanine       4.5         52           1
 G glycine             6.7         78           2
 H histidine           6.9         80           1
 I isoleucine          5.1         59           2
 K lysine             16.8        196           2
 L leucine             4.6         54           1
 M methionine          1.0         12           1
 N asparagine          2.4         28           1
 P proline             3.5         41           2
 Q glutamine           1.1         13           2
 R arginine            1.7         20           2
 S serine              7.4         86           2
 T threonine           7.0         82           3
 V valine              3.0         35           1
 W tryptophan          1.5         18           1
 Y tyrosine            4.8         56           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 208 
ZNF91                 0.694   zinc finger protein 91 
LOC100292052          0.584   PREDICTED: similar to hCG1773661 
LOC100287226          0.584   PREDICTED: similar to hCG1773661 
LOC100287226          0.584   PREDICTED: hypothetical protein XP_002343677 
ZNF99                 0.574   zinc finger protein 99 
ZNF43                 0.447   zinc finger protein 43 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF726                0.442   PREDICTED: zinc finger protein 726 
ZNF721                0.440   zinc finger protein 721 
ZNF728                0.437   PREDICTED: zinc finger protein 728 
ZNF728                0.435   PREDICTED: zinc finger protein 728 
ZNF728                0.435   PREDICTED: zinc finger protein 728 
ZNF107                0.430   zinc finger protein 107 
ZNF107                0.430   zinc finger protein 107 
ZNF493                0.422   zinc finger protein 493 isoform 3 
ZNF845                0.408   zinc finger protein 845 
ZNF676                0.395   zinc finger protein 676 
ZNF254                0.376   zinc finger protein 254 
ZNF836                0.369   zinc finger protein 836 
ZNF429                0.367   zinc finger protein 429 
ZFP62                 0.364   zinc finger protein 62 homolog 
ZNF493                0.352   zinc finger protein 493 isoform 1 
ZNF681                0.350   zinc finger protein 681 
ZNF93                 0.348   zinc finger protein 93 
ZNF841                0.348   zinc finger protein 841 
ZNF85                 0.347   zinc finger protein 85 
ZNF595                0.345   zinc finger protein 595 
ZNF808                0.343   zinc finger protein 808 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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