Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 30026034
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30026034 solute carrier family 35, member B2 [Homo sapiens]
(432 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30026034 solute carrier family 35, member B2 [Homo sapiens] 863 0.0
gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 132 6e-31
gi|216547942 solute carrier family 35, member B3 [Homo sapiens] 78 1e-14
gi|216547920 solute carrier family 35, member B3 [Homo sapiens] 78 1e-14
gi|21361503 solute carrier family 35, member B3 [Homo sapiens] 78 1e-14
gi|147907044 transmembrane protein 22 [Homo sapiens] 36 0.078
gi|148235965 transmembrane protein 22 [Homo sapiens] 36 0.078
gi|148224156 transmembrane protein 22 [Homo sapiens] 36 0.078
gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 36 0.078
gi|21040249 retinoic acid early transcript 1E [Homo sapiens] 35 0.10
gi|31542943 solute carrier family 35, member F2 [Homo sapiens] 33 0.50
gi|47827222 solute carrier family 35, member E4 [Homo sapiens] 33 0.66
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] 31 2.5
gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens] 30 3.3
gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens] 29 7.3
gi|40807489 egf-like module containing, mucin-like, hormone rece... 29 9.5
>gi|30026034 solute carrier family 35, member B2 [Homo sapiens]
Length = 432
Score = 863 bits (2229), Expect = 0.0
Identities = 432/432 (100%), Positives = 432/432 (100%)
Query: 1 MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYF 60
MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYF
Sbjct: 1 MDARWWAVVVLAAFPSLGAGGETPEAPPESWTQLWFFRFVVNAAGYASFMVPGYLLVQYF 60
Query: 61 RRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQ 120
RRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQ
Sbjct: 61 RRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLAPRTEAAETTPMWQALKLLFCATGLQ 120
Query: 121 VSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG 180
VSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG
Sbjct: 121 VSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSCVLCKQPRHG 180
Query: 181 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY 240
APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY
Sbjct: 181 APMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEY 240
Query: 241 LTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSV 300
LTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSV
Sbjct: 241 LTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSV 300
Query: 301 QMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIG 360
QMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIG
Sbjct: 301 QMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSACGQLFIFYTIG 360
Query: 361 QFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK 420
QFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK
Sbjct: 361 QFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLLRVYARGRLKQRGK 420
Query: 421 KAVPVESPVQKV 432
KAVPVESPVQKV
Sbjct: 421 KAVPVESPVQKV 432
>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
Length = 322
Score = 132 bits (332), Expect = 6e-31
Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 4/298 (1%)
Query: 110 LKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGL 169
L+L C G+ V Y +G+LQE++ YG A E FT + LV + V+ + A +
Sbjct: 12 LRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQ--ETFTFALTLVFIQCVINAVFAKI 69
Query: 170 SCVLCKQPR-HGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGK 228
R + Y+ S+S + + AL+FV++PTQVL K+ K IPVML+G
Sbjct: 70 LIQFFDTARVDRTRSWLYAACSISYLGAMVSSNSALQFVNYPTQVLGKSCKPIPVMLLGV 129
Query: 229 LVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNW 288
+ ++ Y +YL LI GV++F+ T G +LL + D T
Sbjct: 130 TLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIEEHTVGYGELLLLLSLTLDGLTGVS 189
Query: 289 QDALFA-YKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSIC 347
QD + A Y+ S MM +N +S L +L G L E F R+ + LL +
Sbjct: 190 QDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGELWEFLSFAERYPAIIYNILLFGLT 249
Query: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAAL 405
SA GQ FIF T+ FG +II T R+ F IL S +L+ + ++ + +G +VF L
Sbjct: 250 SALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGTVLVFLGL 307
>gi|216547942 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 78.2 bits (191), Expect = 1e-14
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 16/311 (5%)
Query: 111 KLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTD-SQFLVLMNRVLALIVAGL 169
+ C G+ V YL +G LQE + + E F +L L+ I +
Sbjct: 80 QFFICVAGVFVFYLIYGYLQELIFSV----------EGFKSCGWYLTLVQFAFYSIFGLI 129
Query: 170 SCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKL 229
L + R P Y + V + +L ++++PTQV+ K K+IPVML G
Sbjct: 130 ELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVF 189
Query: 230 VSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQ 289
+ + Y + A +S+G+ F L+ + ++P L+G++L++ + D+ N Q
Sbjct: 190 IQGKRYNVADVSAAICMSLGLIWFTLA---DSTTAPNFNLTGVVLISLALCADAVIGNVQ 246
Query: 290 D-ALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHS-EFAAHALLLSIC 347
+ A+ + S+ +M+ ++ + L L F ++ +A L S+
Sbjct: 247 EKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLT 306
Query: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLL 407
G F+ I FGA + + T R+A I+LS + + T +V + L
Sbjct: 307 GYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFL 366
Query: 408 RVYARGRLKQR 418
VY++ K R
Sbjct: 367 NVYSKNMDKIR 377
>gi|216547920 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 78.2 bits (191), Expect = 1e-14
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 16/311 (5%)
Query: 111 KLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTD-SQFLVLMNRVLALIVAGL 169
+ C G+ V YL +G LQE + + E F +L L+ I +
Sbjct: 80 QFFICVAGVFVFYLIYGYLQELIFSV----------EGFKSCGWYLTLVQFAFYSIFGLI 129
Query: 170 SCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKL 229
L + R P Y + V + +L ++++PTQV+ K K+IPVML G
Sbjct: 130 ELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVF 189
Query: 230 VSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQ 289
+ + Y + A +S+G+ F L+ + ++P L+G++L++ + D+ N Q
Sbjct: 190 IQGKRYNVADVSAAICMSLGLIWFTLA---DSTTAPNFNLTGVVLISLALCADAVIGNVQ 246
Query: 290 D-ALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHS-EFAAHALLLSIC 347
+ A+ + S+ +M+ ++ + L L F ++ +A L S+
Sbjct: 247 EKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLT 306
Query: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLL 407
G F+ I FGA + + T R+A I+LS + + T +V + L
Sbjct: 307 GYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFL 366
Query: 408 RVYARGRLKQR 418
VY++ K R
Sbjct: 367 NVYSKNMDKIR 377
>gi|21361503 solute carrier family 35, member B3 [Homo sapiens]
Length = 401
Score = 78.2 bits (191), Expect = 1e-14
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 16/311 (5%)
Query: 111 KLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTD-SQFLVLMNRVLALIVAGL 169
+ C G+ V YL +G LQE + + E F +L L+ I +
Sbjct: 80 QFFICVAGVFVFYLIYGYLQELIFSV----------EGFKSCGWYLTLVQFAFYSIFGLI 129
Query: 170 SCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVIPVMLMGKL 229
L + R P Y + V + +L ++++PTQV+ K K+IPVML G
Sbjct: 130 ELQLIQDKRRRIPGKTYMIIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVF 189
Query: 230 VSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILLAGYIAFDSFTSNWQ 289
+ + Y + A +S+G+ F L+ + ++P L+G++L++ + D+ N Q
Sbjct: 190 IQGKRYNVADVSAAICMSLGLIWFTLA---DSTTAPNFNLTGVVLISLALCADAVIGNVQ 246
Query: 290 D-ALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHS-EFAAHALLLSIC 347
+ A+ + S+ +M+ ++ + L L F ++ +A L S+
Sbjct: 247 EKAMKLHNASNSEMVLYSYSIGFVYILLGLTCTSGLGPAVTFCAKNPVRTYGYAFLFSLT 306
Query: 348 SACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLL 407
G F+ I FGA + + T R+A I+LS + + T +V + L
Sbjct: 307 GYFGISFVLALIKIFGALIAVTVTTGRKAMTIVLSFIFFAKPFTFQYVWSGLLVVLGIFL 366
Query: 408 RVYARGRLKQR 418
VY++ K R
Sbjct: 367 NVYSKNMDKIR 377
>gi|147907044 transmembrane protein 22 [Homo sapiens]
Length = 412
Score = 35.8 bits (81), Expect = 0.078
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 185 RYSFASLSNVLSSWCQYEALKFV--SFPTQVLAKASKVIPVMLMGKLVSRR-SYEHWEYL 241
R F + NV+S C Y + V S T + + V +L LV + +Y +
Sbjct: 167 RLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATV 226
Query: 242 TATLISIGVSMF---------LLSSGPEPRSSPATTLSGLILLAGYIAFDSFT---SNWQ 289
+++ + + M LL++ E T ++GL I + S S W
Sbjct: 227 VCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWT 286
Query: 290 DALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSA 349
ALF + + ++G++ T+ L E L+G E ++ + + +CS
Sbjct: 287 -ALFTFGWTGT--IWGIS------TMFILQEPIIPLDG--------ETWSYLIAICVCST 329
Query: 350 CGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCL---LYGHTVTVVGGLGVAV-VFAAL 405
L ++Y + +F A+ + + L A++L L ++ V GG+ + + VF
Sbjct: 330 AAFLGVYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLA 389
Query: 406 LLRVYARGRLKQRGKKAVPVESPVQ 430
++Y R KQ ++ ++SP++
Sbjct: 390 GYKLYWRNLRKQDYQEI--LDSPIK 412
>gi|148235965 transmembrane protein 22 [Homo sapiens]
Length = 412
Score = 35.8 bits (81), Expect = 0.078
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 185 RYSFASLSNVLSSWCQYEALKFV--SFPTQVLAKASKVIPVMLMGKLVSRR-SYEHWEYL 241
R F + NV+S C Y + V S T + + V +L LV + +Y +
Sbjct: 167 RLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATV 226
Query: 242 TATLISIGVSMF---------LLSSGPEPRSSPATTLSGLILLAGYIAFDSFT---SNWQ 289
+++ + + M LL++ E T ++GL I + S S W
Sbjct: 227 VCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWT 286
Query: 290 DALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSA 349
ALF + + ++G++ T+ L E L+G E ++ + + +CS
Sbjct: 287 -ALFTFGWTGT--IWGIS------TMFILQEPIIPLDG--------ETWSYLIAICVCST 329
Query: 350 CGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCL---LYGHTVTVVGGLGVAV-VFAAL 405
L ++Y + +F A+ + + L A++L L ++ V GG+ + + VF
Sbjct: 330 AAFLGVYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLA 389
Query: 406 LLRVYARGRLKQRGKKAVPVESPVQ 430
++Y R KQ ++ ++SP++
Sbjct: 390 GYKLYWRNLRKQDYQEI--LDSPIK 412
>gi|148224156 transmembrane protein 22 [Homo sapiens]
Length = 412
Score = 35.8 bits (81), Expect = 0.078
Identities = 57/265 (21%), Positives = 111/265 (41%), Gaps = 38/265 (14%)
Query: 185 RYSFASLSNVLSSWCQYEALKFV--SFPTQVLAKASKVIPVMLMGKLVSRR-SYEHWEYL 241
R F + NV+S C Y + V S T + + V +L LV + +Y +
Sbjct: 167 RLFFYGVCNVISITCAYTSFSIVPPSNGTTMWRATTTVFSAILAFLLVDEKMAYVDMATV 226
Query: 242 TATLISIGVSMF---------LLSSGPEPRSSPATTLSGLILLAGYIAFDSFT---SNWQ 289
+++ + + M LL++ E T ++GL I + S S W
Sbjct: 227 VCSILGVCLVMIPNIVDEDNSLLNAWKEAFGYTMTVMAGLTTALSMIVYRSIKEKISMWT 286
Query: 290 DALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSICSA 349
ALF + + ++G++ T+ L E L+G E ++ + + +CS
Sbjct: 287 -ALFTFGWTGT--IWGIS------TMFILQEPIIPLDG--------ETWSYLIAICVCST 329
Query: 350 CGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCL---LYGHTVTVVGGLGVAV-VFAAL 405
L ++Y + +F A+ + + L A++L L ++ V GG+ + + VF
Sbjct: 330 AAFLGVYYALDKFHPALVSTVQHLEIVVAMVLQLLVLHIFPSIYDVFGGVIIMISVFVLA 389
Query: 406 LLRVYARGRLKQRGKKAVPVESPVQ 430
++Y R KQ ++ ++SP++
Sbjct: 390 GYKLYWRNLRKQDYQEI--LDSPIK 412
>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
Length = 331
Score = 35.8 bits (81), Expect = 0.078
Identities = 47/229 (20%), Positives = 95/229 (41%), Gaps = 35/229 (15%)
Query: 207 VSFPTQVLAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPA 266
++ P ++ ++ +I M++G ++ ++ Y ++Y + L+S+G+ + S +
Sbjct: 88 IAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGIFICTFMSAKQ-----V 142
Query: 267 TTLSGLILLAGYIAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCL--FTVGSLLEQGAL 324
T+ S L G+ AF + FA MS+ +F + + +L AL
Sbjct: 143 TSQSSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKHSKEALFYNHAL 202
Query: 325 -LEGTRFMGRHSEFAAHALL--------LSICSACGQLFIFYTI-----------GQF-- 362
L G F+ S+ HA+L + + + FY + G F
Sbjct: 203 PLPGFVFLA--SDIYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQYVCIRGVFIL 260
Query: 363 ----GAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGLGVAVVFAALLL 407
+ T+++TLR+ +++ S L + + T+ LG VF L+
Sbjct: 261 TTECASLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFVFIGTLM 309
>gi|21040249 retinoic acid early transcript 1E [Homo sapiens]
Length = 263
Score = 35.4 bits (80), Expect = 0.10
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 154 FLVLMNRVLALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQV 213
FL+L+ L ++V G S LC + ++ SLS WC+ + + Q
Sbjct: 16 FLLLLLIALEIMVGGHS--LC---------FNFTIKSLSRPGQPWCEAQVFLNKNLFLQY 64
Query: 214 LAKASKVIPVMLMGKLVSRRSYEHWEYLTATLISIG--VSMFLLSSGPEPRSSPATTL 269
+ + V P+ L+GK V S W LT TL +G + M L P+ ++S +TL
Sbjct: 65 NSDNNMVKPLGLLGKKVYATS--TWGELTQTLGEVGRDLRMLLCDIKPQIKTSDPSTL 120
>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
Length = 374
Score = 33.1 bits (74), Expect = 0.50
Identities = 55/328 (16%), Positives = 120/328 (36%), Gaps = 25/328 (7%)
Query: 102 ETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRV 161
+T + Q L L C T + YL M +S F + L L+ V
Sbjct: 41 KTIALGQMLSLCICGTAITSQYLAERYKVNTPMLQS-----------FINYCLLFLIYTV 89
Query: 162 LALIVAGLSCVLCKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLAKASKVI 221
+ +G +L R ++Y L++V +++ A ++ + + L +
Sbjct: 90 MLAFRSGSDNLLVILKRK---WWKYILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIP 146
Query: 222 PVMLMGKLVSRRSYEHWEYLTATLISIGVSMFL---LSSGPEPRSSPATTLSGLILLAGY 278
+M + + Y ++ + +GV + + +G E S + +++L G
Sbjct: 147 VLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIGDILVLLGA 206
Query: 279 IAFDSFTSNWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFA 338
+ SN + K+S + + V F + + LL ++E H ++
Sbjct: 207 SLYA--ISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLL----IVEYKDIASIHWDWK 260
Query: 339 AHALLLS--ICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTVVGGL 396
L ++ +C C F+ I A + + +++ + L+G+ + + L
Sbjct: 261 IALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLYIL 320
Query: 397 GVAVVFAALLLRVYARGRLKQRGKKAVP 424
V+ +L R + + +VP
Sbjct: 321 SFTVIMVGFILYCSTPTRTAEPAESSVP 348
>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
Length = 350
Score = 32.7 bits (73), Expect = 0.66
Identities = 55/255 (21%), Positives = 100/255 (39%), Gaps = 14/255 (5%)
Query: 157 LMNRVLALIVAGLSCVL-CKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFPTQVLA 215
L+ L ++VA L+C ++P G R SL+ S C L+ V L
Sbjct: 80 LLLSALHMLVAALACHRGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLV 139
Query: 216 KASKVIPVMLMGKLVSRRSYEHWEYLTATLISIGVSMFLLSSGPEPRSSPATTLSGLILL 275
+ + + + L+ R + + + +G + L E R+ P T G +L
Sbjct: 140 TTTTPLFTLALSALLLGRRHHPLQLAAMGPLCLGAACSLAG---EFRTPP--TGCGFLLA 194
Query: 276 AGYIAFDSFTSNWQDALFAY-KMSSVQMMFGVNFFSCLFTVGS--LLEQGALLEGTRFMG 332
A + S Q AL ++ +V +++ + S G+ +LE G T
Sbjct: 195 ATCLR--GLKSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPT---A 249
Query: 333 RHSEFAAHALLLSICSACGQLFIFYTIGQFGAAVFTIIMTLRQAFAILLSCLLYGHTVTV 392
S A LL + S L F + A ++ L ++LS LL+G ++
Sbjct: 250 GDSRLWACILLSCLLSVLYNLASFSLLALTSALTVHVLGNLTVVGNLILSRLLFGSRLSA 309
Query: 393 VGGLGVAVVFAALLL 407
+ +G+A+ + + L
Sbjct: 310 LSYVGIALTLSGMFL 324
>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
Length = 4857
Score = 30.8 bits (68), Expect = 2.5
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 101 AETTPMWQALKLLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNR 160
+E P+W AL L C +G G Q + S + AT+ T Q + N
Sbjct: 3706 SEVNPLWTALLFLLCHSGSTSGSHNLGAQQTSARSASLSSAATT---GLTTQQRTAIENA 3762
Query: 161 VLALIVAGLSC 171
+A + +SC
Sbjct: 3763 TVAFFLQCISC 3773
>gi|154937330 sodium-dependent glucose transporter 1 [Homo sapiens]
Length = 518
Score = 30.4 bits (67), Expect = 3.3
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 287 NWQDALFAYKMSSVQMMFGVNFFSCLFTVGSLLEQGALLEGTRFMGRHSEFAAHALLLSI 346
N ++ L+AY + M F CLF S ++ A F R +++ H LL +
Sbjct: 178 NDKNLLWAYAVIGTYMFLVSVIFFCLFLKNSSKQEKARASAETF--RRAKY--HNALLCL 233
Query: 347 CSACGQLFIFYTIG---QFGAAVFTIIMT---LRQAFAILLSCLLYGHTVTVVGGLGVAV 400
LF F+ +G +G+ VF+ T ++++ A L+ + +G T G+A+
Sbjct: 234 LF----LFFFFYVGAEVTYGSYVFSFATTHAGMKESEAAGLNSIFWG---TFAACRGLAI 286
Query: 401 VFAALL 406
FA L
Sbjct: 287 FFATCL 292
>gi|189571674 cadherin-like 23 isoform 1 precursor [Homo sapiens]
Length = 3354
Score = 29.3 bits (64), Expect = 7.3
Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 30/151 (19%)
Query: 40 VVNAAGYASF----MVPGYLLVQYFRRKNYLETGRGLCFPLVKACVFGNEPKASDEVPLA 95
+V+A+ + S+ + GY ++ R +Y + GL + V A GN P + VP+
Sbjct: 600 IVSASAFGSYFDISLYEGYGVISVSRPLDYEQISNGLIYLTVMAMDAGN-PPLNSTVPVT 658
Query: 96 PRTEAAETTP----------------MWQALKLLFCATGL---------QVSYLTWGVLQ 130
P M A L AT L + Y G Q
Sbjct: 659 IEVFDENDNPPTFSKPAYFVSVVENIMAGATVLFLNATDLDRSREYGQESIIYSLEGSTQ 718
Query: 131 ERVMTRSYGATATSPGERFTDSQFLVLMNRV 161
R+ RS T TS +R T S++++++ V
Sbjct: 719 FRINARSGEITTTSLLDRETKSEYILIVRAV 749
>gi|40807489 egf-like module containing, mucin-like, hormone
receptor-like sequence 1 [Homo sapiens]
Length = 886
Score = 28.9 bits (63), Expect = 9.5
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 315 VGSLLEQGALLEGTRFMGRHSEFAAHALLLSI-CSACGQLFIFYTIGQFGAAVFTIIMTL 373
+ S+ + + L+ TR + F A A L + CS +F + A +FTII +L
Sbjct: 780 LSSVNAEVSTLKDTRLL----TFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 835
Query: 374 RQAFAILLSCLLYG 387
+ AF L+ CLL G
Sbjct: 836 QGAFIFLIHCLLNG 849
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,889,559
Number of Sequences: 37866
Number of extensions: 642741
Number of successful extensions: 2050
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2039
Number of HSP's gapped (non-prelim): 16
length of query: 432
length of database: 18,247,518
effective HSP length: 105
effective length of query: 327
effective length of database: 14,271,588
effective search space: 4666809276
effective search space used: 4666809276
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.