CDH23 10476

Name: CDH23	Sequence: fasta or formatted (3354aa)		NCBI GI: 189571674
Description: cadherin-like 23 isoform 1 precursor		Referenced in: Cadherins and Related Proteins Auditory and Vestibular Functions PDZ Domain
Other entries for this name: alt prot [530aa] cadherin-like 23 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 221 2 C cysteine 0.4 14 1 D aspartate 8.1 272 3 E glutamate 6.0 202 3 F phenylalanine 3.9 130 2 G glycine 6.4 213 3 H histidine 1.7 58 2 I isoleucine 6.9 231 3 K lysine 2.4 79 2 L leucine 9.0 303 4 M methionine 1.4 48 2 N asparagine 6.0 202 2 P proline 5.7 190 2 Q glutamine 3.1 103 3 R arginine 5.1 172 2 S serine 6.4 213 3 T threonine 7.6 256 3 V valine 9.5 319 3 W tryptophan 0.4 15 1 Y tyrosine 3.4 113 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cadherin-like 23 isoform 1 precursor FAT4 0.157 FAT tumor suppressor homolog 4 CDH23 0.142 cadherin-like 23 isoform 2 precursor DCHS1 0.136 dachsous 1 precursor FAT1 0.132 FAT tumor suppressor 1 precursor FAT3 0.132 FAT tumor suppressor homolog 3 FAT2 0.128 FAT tumor suppressor 2 precursor DCHS2 0.108 dachsous 2 isoform 1 CELSR2 0.063 cadherin EGF LAG seven-pass G-type receptor 2 CELSR1 0.059 cadherin EGF LAG seven-pass G-type receptor 1 CELSR3 0.056 cadherin EGF LAG seven-pass G-type receptor 3 [Homo... DCHS2 0.051 dachsous 2 isoform 2 PCDH24 0.045 protocadherin LKC precursor PCDH15 0.042 protocadherin 15 isoform CD2-1 precursor PCDH15 0.042 protocadherin 15 isoform CD1-8 precursor PCDH15 0.040 protocadherin 15 isoform CD1-4 precursor PCDH15 0.040 protocadherin 15 isoform CD1-10 precursor PCDH15 0.040 protocadherin 15 isoform CD3-2 precursor PCDH15 0.040 protocadherin 15 isoform CD3-1 precursor PCDH15 0.040 protocadherin 15 isoform CD2-2 precursor PCDH15 0.040 protocadherin 15 isoform CD1-9 precursor PCDH15 0.040 protocadherin 15 isoform CD1-7 precursor PCDH15 0.040 protocadherin 15 isoform CD1-2 precursor PCDH15 0.040 protocadherin 15 isoform CD1-1 precursor PCDH9 0.039 protocadherin 9 isoform 2 precursor PCDH9 0.039 protocadherin 9 isoform 1 precursor PCDH15 0.039 protocadherin 15 isoform CD1-6 precursor PCDH21 0.039 protocadherin 21 precursor PCDH1 0.036 protocadherin 1 isoform 2 precursor PCDH1 0.036 protocadherin 1 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.