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Search of human proteins with 29294643
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
(97 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 209 3e-55
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 181 9e-47
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 48 1e-06
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 48 2e-06
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 48 2e-06
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 48 2e-06
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 48 2e-06
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 43 6e-05
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 43 6e-05
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 43 6e-05
gi|9966907 ARS component B precursor [Homo sapiens] 41 2e-04
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 40 4e-04
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 40 4e-04
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 40 4e-04
gi|30794264 glycosylphosphatidylinositol anchored high density l... 37 0.003
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 36 0.008
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 36 0.008
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 35 0.017
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 32 0.083
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 32 0.083
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens] 32 0.083
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ... 30 0.41
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ... 30 0.41
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p... 30 0.41
gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens] 30 0.41
gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens] 30 0.41
gi|221554530 prostate and testis expressed 4 [Homo sapiens] 29 0.92
gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens] 28 1.2
gi|194097375 ankyrin repeat domain 33 isoform 2 [Homo sapiens] 28 1.2
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 28 2.1
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 209 bits (533), Expect = 3e-55
Identities = 97/97 (100%), Positives = 97/97 (100%)
Query: 1 MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED 60
MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED
Sbjct: 1 MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTED 60
Query: 61 LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD
Sbjct: 61 LPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 181 bits (460), Expect = 9e-47
Identities = 80/90 (88%), Positives = 86/90 (95%)
Query: 8 LLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM 67
++A ++ + +AAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM
Sbjct: 42 MVAYCMTTRTSAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM 101
Query: 68 CHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
CHIGCPDIPSLGLGPYVSIACCQTSLCNHD
Sbjct: 102 CHIGCPDIPSLGLGPYVSIACCQTSLCNHD 131
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 48.1 bits (113), Expect = 1e-06
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 4 GTGL-LLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTT--ATRVLSN 57
GT L LLA VL+ A A+ C+ C TG C + C + T C TT + ++
Sbjct: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
Query: 58 TEDLPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
+ VTK C C G+G + ++CC T LCN D
Sbjct: 63 FQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVD 102
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 47.8 bits (112), Expect = 2e-06
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
LLLAAV + A A+A+ CH C G C C +CV T + + LV K
Sbjct: 8 LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60
Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
C CP+ +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 47.8 bits (112), Expect = 2e-06
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
LLLAAV + A A+A+ CH C G C C +CV T + + LV K
Sbjct: 8 LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60
Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
C CP+ +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 47.8 bits (112), Expect = 2e-06
Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
LLLAAV + A A+A+ CH C G C C +CV T + + LV K
Sbjct: 8 LLLAAVCA---ALAQALHCHVCCGHEHCESLVECAPTDKYCVITR----ATSPGGILVMK 60
Query: 67 MCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
C CP+ +S++CCQ S CN
Sbjct: 61 SCSPTCPNSTVSSDSRALSVSCCQGSQCN 89
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 47.8 bits (112), Expect = 2e-06
Identities = 37/98 (37%), Positives = 40/98 (40%), Gaps = 14/98 (14%)
Query: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDL--P 62
T LLL A L++ A + CH CT C H C S C TT T E L
Sbjct: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVVCPASSRFCKTTNT-----VEPLRGN 57
Query: 63 LVTKMCHIGCPDIPSLGLGPYV-----SIACCQTSLCN 95
LV K C C PS L V S CCQ LCN
Sbjct: 58 LVKKDCAESC--TPSYTLQGQVSSGTSSTQCCQEDLCN 93
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 42.7 bits (99), Expect = 6e-05
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 4 GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
G GL L AVL L A A +WC CT SH +C T C + S++
Sbjct: 29 GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 87
Query: 62 PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
V KMC C + Y V + CC+ LCN
Sbjct: 88 HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 42.7 bits (99), Expect = 6e-05
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 4 GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
G GL L AVL L A A +WC CT SH +C T C + S++
Sbjct: 8 GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 66
Query: 62 PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
V KMC C + Y V + CC+ LCN
Sbjct: 67 HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 111
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 42.7 bits (99), Expect = 6e-05
Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 14/105 (13%)
Query: 4 GTGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSH--GSRCLRDSTHCVTTATRVLSNTEDL 61
G GL L AVL L A A +WC CT SH +C T C + S++
Sbjct: 29 GLGLALLAVL-LCSAPAHGLWCQDCTLTTNSSHCTPKQCQPSDTVCASVRITDPSSSRKD 87
Query: 62 PLVTKMCHIGCPDIPSLGLGPY-----------VSIACCQTSLCN 95
V KMC C + Y V + CC+ LCN
Sbjct: 88 HSVNKMCASSCDFVKRHFFSDYLMGFINSGILKVDVDCCEKDLCN 132
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 40.8 bits (94), Expect = 2e-04
Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 7/96 (7%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTG---FGGCSHGSRCLRDSTHCVTTATRVLSNT--EDL 61
LLL A S+ EA+ C+ C C +RC + T C+TT V +
Sbjct: 9 LLLVAAWSM--GCGEALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQS 66
Query: 62 PLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
P+VT+ C C +G I CC LCN +
Sbjct: 67 PVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCNSE 102
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo
sapiens]
Length = 116
Score = 40.0 bits (92), Expect = 4e-04
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
L L V+ + L A+A+ CH C G C + RC +C+TT T T V+
Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61
Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
K C C + G + S +CCQ LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo
sapiens]
Length = 116
Score = 40.0 bits (92), Expect = 4e-04
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
L L V+ + L A+A+ CH C G C + RC +C+TT T T V+
Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61
Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
K C C + G + S +CCQ LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo
sapiens]
Length = 116
Score = 40.0 bits (92), Expect = 4e-04
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFG-GCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVT 65
L L V+ + L A+A+ CH C G C + RC +C+TT T T V+
Sbjct: 5 LTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMRCPAMVAYCMTTRTYY---TPTRMKVS 61
Query: 66 KMCHIGCPDIPSLGLGPYVSI-ACCQTSLCN 95
K C C + G + S +CCQ LCN
Sbjct: 62 KSCVPRCFETVYDGYSKHASTTSCCQYDLCN 92
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 37.0 bits (84), Expect = 0.003
Identities = 24/71 (33%), Positives = 28/71 (39%), Gaps = 11/71 (15%)
Query: 27 QCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKM--CHIGCPDIPSLGLGPYV 84
+C CSHG C H NTE L T C C I G V
Sbjct: 76 RCNLTQNCSHGQTCTTLIAH---------GNTESGLLTTHSTWCTDSCQPITKTVEGTQV 126
Query: 85 SIACCQTSLCN 95
++ CCQ+SLCN
Sbjct: 127 TMTCCQSSLCN 137
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 1 MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGG---CSHGSRCLRDSTHCVT-TATRVLS 56
M++ +LLAA+L ++ A++ + C C C + C +CVT +A+ +
Sbjct: 1 MKIFLPVLLAALLGVERASS--LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIG 58
Query: 57 NTEDLP-LVTKMCHIGCPDIPSLGLG-PYVSIACCQTSLCN 95
N ++K C CP + +G + I+CCQ+ LCN
Sbjct: 59 NLVTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCN 99
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 35.8 bits (81), Expect = 0.008
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 1 MQLGTGLLLAAVLSLQLAAAEAIWCHQCTGFGG---CSHGSRCLRDSTHCVT-TATRVLS 56
M++ +LLAA+L ++ A++ + C C C + C +CVT +A+ +
Sbjct: 1 MKIFLPVLLAALLGVERASS--LMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIG 58
Query: 57 NTEDLP-LVTKMCHIGCPDIPSLGLG-PYVSIACCQTSLCN 95
N ++K C CP + +G + I+CCQ+ LCN
Sbjct: 59 NLVTFGHSLSKTCSPACPIPEGVNVGVASMGISCCQSFLCN 99
>gi|5031995 prostate stem cell antigen preproprotein [Homo
sapiens]
Length = 123
Score = 34.7 bits (78), Expect = 0.017
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPL 63
LL + L L A+ C+ C C C + C T R + L +
Sbjct: 5 LLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGL---LTV 61
Query: 64 VTKMCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
++K C + C D +I CC T LCN
Sbjct: 62 ISKGCSLNCVDDSQDYYVGKKNITCCDTDLCN 93
>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 32.3 bits (72), Expect = 0.083
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
T LL +L L + C CT G HG C D CV + S ++L
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 63 LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
K C I D + S +GP S CCQ+ CN
Sbjct: 69 HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108
>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 32.3 bits (72), Expect = 0.083
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
T LL +L L + C CT G HG C D CV + S ++L
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 63 LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
K C I D + S +GP S CCQ+ CN
Sbjct: 69 HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108
>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 32.3 bits (72), Expect = 0.083
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
T LL +L L + C CT G HG C D CV + S ++L
Sbjct: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
Query: 63 LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
K C I D + S +GP S CCQ+ CN
Sbjct: 69 HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108
>gi|53829381 plasminogen activator, urokinase receptor isoform 3
precursor [Homo sapiens]
Length = 290
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
L L +L + A+ + C QC G C C C TT R+ E+L LV K
Sbjct: 7 LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65
Query: 67 MC 68
C
Sbjct: 66 SC 67
>gi|53829379 plasminogen activator, urokinase receptor isoform 2
precursor [Homo sapiens]
Length = 281
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
L L +L + A+ + C QC G C C C TT R+ E+L LV K
Sbjct: 7 LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65
Query: 67 MC 68
C
Sbjct: 66 SC 67
>gi|4505865 plasminogen activator, urokinase receptor isoform 1
precursor [Homo sapiens]
Length = 335
Score = 30.0 bits (66), Expect = 0.41
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTK 66
L L +L + A+ + C QC G C C C TT R+ E+L LV K
Sbjct: 7 LPLLLLLHTCVPASWGLRCMQCKTNGDC-RVEECALGQDLCRTTIVRLWEEGEELELVEK 65
Query: 67 MC 68
C
Sbjct: 66 SC 67
>gi|164698546 LY6/PLAUR domain containing 5 isoform A [Homo sapiens]
Length = 251
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 17 LAAAEAIWC---HQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCP 73
L+ AE C HQ G S +C +D T C R+ +P+ + CH P
Sbjct: 130 LSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RP 187
Query: 74 DIPSLG-LGPYVSI----ACCQTSLCN 95
+ G P+ +I +CC+ LCN
Sbjct: 188 SCTTEGTTSPWTAIDLQGSCCEGYLCN 214
>gi|164663808 LY6/PLAUR domain containing 5 isoform B [Homo sapiens]
Length = 208
Score = 30.0 bits (66), Expect = 0.41
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 17 LAAAEAIWC---HQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCP 73
L+ AE C HQ G S +C +D T C R+ +P+ + CH P
Sbjct: 87 LSGAECYACIGVHQDDCAIGRSRRVQCHQDQTACFQGNGRMTVGNFSVPVYIRTCH--RP 144
Query: 74 DIPSLG-LGPYVSI----ACCQTSLCN 95
+ G P+ +I +CC+ LCN
Sbjct: 145 SCTTEGTTSPWTAIDLQGSCCEGYLCN 171
>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
Length = 98
Score = 28.9 bits (63), Expect = 0.92
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 9/94 (9%)
Query: 7 LLLAAVLSLQLAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNT-----EDL 61
LLL ++ L L + C+ C + G +C+ C+ + S T +
Sbjct: 7 LLLVSLSFLYLKEVMGLKCNTCI----YTEGWKCMAGRGTCIAKENELCSTTAYFRGDKH 62
Query: 62 PLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCN 95
T MC C + S G CC + CN
Sbjct: 63 MYSTHMCKYKCREEESSKRGLLRVTLCCDRNFCN 96
>gi|194097377 ankyrin repeat domain 33 isoform 1 [Homo sapiens]
Length = 272
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 46 HCVTTATRVLSNTEDLPLVTKMCHIGCPD-IPSLG 79
H VT T + S P VT CH CPD PSLG
Sbjct: 182 HLVTATTSLAS-----PFVTTACHTLCPDHPPSLG 211
>gi|194097375 ankyrin repeat domain 33 isoform 2 [Homo sapiens]
Length = 452
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 6/35 (17%)
Query: 46 HCVTTATRVLSNTEDLPLVTKMCHIGCPD-IPSLG 79
H VT T + S P VT CH CPD PSLG
Sbjct: 307 HLVTATTSLAS-----PFVTTACHTLCPDHPPSLG 336
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 27.7 bits (60), Expect = 2.1
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 17 LAAAEAIWCHQCTGFGGCSHGSRCLRDSTHCV 48
L+ E +W C+ C +G CL ++ +CV
Sbjct: 565 LSCPEGLWGVNCSNTCTCKNGGTCLPENGNCV 596
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.136 0.461
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,803,298
Number of Sequences: 37866
Number of extensions: 143255
Number of successful extensions: 587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 560
Number of HSP's gapped (non-prelim): 53
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.