LOC390940 23169

Name: LOC390940	Sequence: fasta or formatted (204aa)		NCBI GI: 239757302
Description: PREDICTED: similar to R28379_1		Not currently referenced in the text
Other entries for this name: alt mRNA {204aa} PREDICTED: similar to R28379_1 alt mRNA {204aa} PREDICTED: similar to R28379_1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 11 2 C cysteine 9.8 20 2 D aspartate 2.9 6 1 E glutamate 3.9 8 1 F phenylalanine 4.4 9 1 G glycine 8.8 18 1 H histidine 4.9 10 2 I isoleucine 2.5 5 1 K lysine 5.4 11 1 L leucine 9.3 19 2 M methionine 4.4 9 1 N asparagine 2.5 5 1 P proline 4.9 10 1 Q glutamine 2.0 4 1 R arginine 3.9 8 2 S serine 8.8 18 2 T threonine 9.8 20 2 V valine 5.4 11 1 W tryptophan 0.0 0 0 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to R28379_1 LOC390940 1.000 PREDICTED: similar to R28379_1 LOC390940 1.000 PREDICTED: similar to R28379_1 PLAUR 0.053 plasminogen activator, urokinase receptor isoform 1 p... LOC646627 0.048 phospholipase inhibitor CD177 0.041 CD177 molecule PLAUR 0.036 plasminogen activator, urokinase receptor isoform 3 ... LYPD4 0.031 LY6/PLAUR domain containing 4 LY6D 0.024 lymphocyte antigen 6 complex, locus D GLI2 0.022 GLI-Kruppel family member GLI2 LYNX1 0.022 Ly-6 neurotoxin-like protein 1 isoform c LYNX1 0.022 Ly-6 neurotoxin-like protein 1 isoform c LYNX1 0.022 Ly-6 neurotoxin-like protein 1 isoform c LYPD3 0.022 GPI-anchored metastasis-associated protein homolog [... PLAUR 0.019 plasminogen activator, urokinase receptor isoform 2 ... GLI3 0.019 GLI-Kruppel family member GLI3 LYNX1 0.017 secreted Ly6/uPAR related protein 2 isoform b TGFBR1 0.014 transforming growth factor, beta receptor I isoform 1... TGFBR1 0.014 transforming growth factor, beta receptor I isoform... FBN1 0.012 fibrillin 1 precursor FBN2 0.012 fibrillin 2 precursor GLI1 0.012 GLI family zinc finger 1 isoform 2 GLI1 0.012 GLI family zinc finger 1 isoform 1 MTF1 0.012 metal-regulatory transcription factor 1 ADAMTS14 0.012 ADAM metallopeptidase with thrombospondin type 1 mot... ADAMTS14 0.012 ADAM metallopeptidase with thrombospondin type 1 mo... KRTAP10-4 0.010 keratin associated protein 10-4 LOC100292811 0.010 PREDICTED: similar to proprotein convertase subtili... TCN1 0.010 transcobalamin I precursor LY6E 0.007 lymphocyte antigen 6 complex, locus E Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.