Guide to the Human Genome
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Name: ANKRD33 Sequence: fasta or formatted (272aa) NCBI GI: 194097377
Description:

ankyrin repeat domain 33 isoform 1

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [452aa] ankyrin repeat domain 33 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         31           2
 C cysteine            2.2          6           1
 D aspartate           4.8         13           1
 E glutamate           5.1         14           3
 F phenylalanine       2.2          6           1
 G glycine             8.5         23           4
 H histidine           2.6          7           1
 I isoleucine          1.1          3           1
 K lysine              2.2          6           1
 L leucine            13.2         36           3
 M methionine          1.8          5           1
 N asparagine          1.8          5           1
 P proline             7.0         19           2
 Q glutamine           7.0         19           2
 R arginine            5.5         15           2
 S serine              6.6         18           2
 T threonine           6.6         18           2
 V valine              7.7         21           2
 W tryptophan          1.1          3           1
 Y tyrosine            1.5          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 33 isoform 1 
ANKRD33               0.756   ankyrin repeat domain 33 isoform 2 
ANKRD33B              0.361   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.361   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.361   PREDICTED: ankyrin repeat domain 33B 
ANKDD1A               0.069   ankyrin repeat and death domain containing 1A 
ANKRD52               0.061   ankyrin repeat domain 52 
ANKRD50               0.060   ankyrin repeat domain 50 
NFKB1                 0.056   nuclear factor kappa-B, subunit 1 
ANKRD35               0.056   ankyrin repeat domain 35 
TNKS                  0.054   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
KIDINS220             0.054   kinase D-interacting substrate of 220 kDa 
MPHOSPH8              0.052   M-phase phosphoprotein 8 
KANK3                 0.052   ankyrin repeat domain 47 
ANKRD62               0.052   PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...
RAI14                 0.050   retinoic acid induced 14 isoform d 
RAI14                 0.050   retinoic acid induced 14 isoform c 
RAI14                 0.050   retinoic acid induced 14 isoform b 
RAI14                 0.050   retinoic acid induced 14 isoform a 
RAI14                 0.050   retinoic acid induced 14 isoform a 
RAI14                 0.050   retinoic acid induced 14 isoform a 
ANKRD2                0.050   ankyrin repeat domain 2 isoform a 
ANKRD62               0.048   PREDICTED: ankyrin repeat domain 62 
ANKRD62               0.048   PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...
EHMT1                 0.048   euchromatic histone-lysine N-methyltransferase 1 is...
TNKS2                 0.048   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TANC2                 0.048   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD26               0.048   ankyrin repeat domain 26 
ANKHD1                0.048   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.048   ankyrin repeat and KH domain containing 1 isoform 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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