HOXC12 24538

Name: HOXC12	Sequence: fasta or formatted (282aa)		NCBI GI: 27804315
Description: homeobox C12		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 18 2 C cysteine 1.8 5 1 D aspartate 3.9 11 1 E glutamate 6.0 17 2 F phenylalanine 3.9 11 2 G glycine 14.9 42 5 H histidine 1.1 3 1 I isoleucine 1.4 4 1 K lysine 4.3 12 3 L leucine 11.3 32 3 M methionine 0.7 2 1 N asparagine 5.0 14 1 P proline 10.6 30 2 Q glutamine 3.2 9 2 R arginine 7.4 21 3 S serine 9.2 26 4 T threonine 1.4 4 1 V valine 2.8 8 1 W tryptophan 1.1 3 1 Y tyrosine 3.5 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox C12 HOXD12 0.280 homeobox D12 HOXC11 0.131 homeobox C11 HOXD11 0.129 homeobox D11 HOXB3 0.122 homeobox B3 HOXA10 0.116 homeobox A10 isoform a HOXD9 0.113 homeobox D9 HOXA11 0.101 homeobox A11 HOXA9 0.101 homeobox A9 HOXB13 0.099 homeobox B13 HOXB9 0.097 homeobox B9 HOXD13 0.095 homeobox D13 HOXC13 0.095 homeobox C13 HOXC9 0.095 homeobox C9 HOXC10 0.095 homeobox C10 HOXD10 0.095 homeobox D10 HOXA13 0.095 homeobox A13 HOXA10 0.095 homeobox A10 isoform b HOXD1 0.088 homeobox D1 HOXD3 0.086 homeobox D3 HOXD8 0.086 homeobox D8 HOXD4 0.083 homeobox D4 EVX1 0.083 even-skipped homeobox 1 MEOX2 0.083 mesenchyme homeobox 2 MEOX1 0.081 mesenchyme homeobox 1 isoform 3 MEOX1 0.081 mesenchyme homeobox 1 isoform 1 HOXB7 0.081 homeobox B7 HOXB8 0.081 homeobox B8 HOXC8 0.079 homeobox C8 HOXA4 0.079 homeobox A4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.