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Search of human proteins with 26638659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|26638659 mitochondrial ribosomal protein L40 [Homo sapiens]
(206 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|26638659 mitochondrial ribosomal protein L40 [Homo sapiens] 412 e-115
gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens] 39 0.003
gi|110349719 titin isoform N2-A [Homo sapiens] 39 0.004
gi|148746195 trichohyalin [Homo sapiens] 39 0.004
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 39 0.004
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.004
gi|117414154 sodium channel associated protein 2 isoform b [Homo... 38 0.005
gi|117414162 sodium channel associated protein 2 isoform a [Homo... 38 0.005
gi|21735548 centrosomal protein 2 [Homo sapiens] 38 0.007
gi|4506467 radixin [Homo sapiens] 38 0.007
gi|221139761 zinc finger protein 853 [Homo sapiens] 37 0.009
gi|219803769 trichoplein [Homo sapiens] 37 0.009
gi|14150056 trichoplein [Homo sapiens] 37 0.009
gi|50658082 centrosomal protein 70 kDa [Homo sapiens] 37 0.009
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 37 0.012
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 37 0.012
gi|148839339 nexilin (F actin binding protein) [Homo sapiens] 37 0.015
gi|4505257 moesin [Homo sapiens] 36 0.020
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 36 0.020
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 36 0.026
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 36 0.026
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 36 0.026
gi|19557702 surfeit 6 [Homo sapiens] 36 0.026
gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens] 35 0.034
gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens] 35 0.034
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 35 0.034
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 35 0.034
gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo s... 35 0.034
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 35 0.045
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 35 0.045
>gi|26638659 mitochondrial ribosomal protein L40 [Homo sapiens]
Length = 206
Score = 412 bits (1058), Expect = e-115
Identities = 206/206 (100%), Positives = 206/206 (100%)
Query: 1 MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKK 60
MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKK
Sbjct: 1 MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKK 60
Query: 61 DQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKK 120
DQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKK
Sbjct: 61 DQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKK 120
Query: 121 WSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTP 180
WSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTP
Sbjct: 121 WSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTP 180
Query: 181 PIPNYQPPEGRYNDITKVYTQVEFKR 206
PIPNYQPPEGRYNDITKVYTQVEFKR
Sbjct: 181 PIPNYQPPEGRYNDITKVYTQVEFKR 206
>gi|219283190 MAX dimerization protein 3 isoform b [Homo sapiens]
Length = 193
Score = 38.9 bits (89), Expect = 0.003
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 26/183 (14%)
Query: 29 ETHQRASLLSFWELIPMRSE-PLRKKKKVDPKKD----------QEAKERLKRKIRK-LE 76
E +R + + L P RS P+ ++KK P+ E ++R + ++++ LE
Sbjct: 19 ERREREAEHGYASLCPHRSPGPIHRRKKRPPQAPGAQDSGRSVHNELEKRRRAQLKRCLE 78
Query: 77 KATQELIPIEDFI--TPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERD 134
+ Q++ D T L L +AR Q E+ E+RA LK+ KQQ + + +
Sbjct: 79 RLKQQMPLGADCARYTTLSLLRRARMHIQ---KLEDQEQRARQLKERLRSKQQSLQRQLE 135
Query: 135 TIRAML-EAQQEALEELQLESPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYN 193
+R + A++E L L+S L +E D + P E G PN++ P GR N
Sbjct: 136 QLRGLAGAAERERLRADSLDSSGLSSERSDSD-QVLPNENGG------TPNHR-PTGRGN 187
Query: 194 DIT 196
+I+
Sbjct: 188 NIS 190
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 38.5 bits (88), Expect = 0.004
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 49 PLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFI---TPLKFLDKARERPQVE 105
P ++KK PK+ + K+ +K+ +K+ +E+ P E+ + P L A+ ++
Sbjct: 8970 PTPEEKKPPPKRIEVTKKAVKKDAKKVVAKPKEMTPREEIVKKPPPPTTLIPAKAPEIID 9029
Query: 106 LTFEETERRAL-LLKKWSLYKQQERKMERDTI-----RAMLEAQQEALEELQLESPKLHA 159
++ + E + + + +K + K++E E+ R +E+ +E +EL++E
Sbjct: 9030 VSSKAEEVKIMTITRKKEVQKEKEAVYEKKQAVHKEKRVFIESFEEPYDELEVE------ 9083
Query: 160 EAIKRDPNLFPFEKEGPHYTPPIPNYQ 186
P PFE+ P+Y P +Y+
Sbjct: 9084 ------PYTEPFEQ--PYYEEPDEDYE 9102
Score = 32.7 bits (73), Expect = 0.22
Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 20/154 (12%)
Query: 44 PMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQ 103
P R+ P K K+ PK+++E ++ +++ K +E + IE K +P
Sbjct: 9668 PKRAVPEEKVLKLKPKREEEPPAKVTEFRKRVVK--EEKVSIE--------APKREPQPI 9717
Query: 104 VELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLE----------AQQEALEELQLE 153
E+T E + RA L++ ++ Q+E + E E Q E EE + E
Sbjct: 9718 KEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDYKEFEEYEPTEEYDQYEEYEEREYE 9777
Query: 154 SPKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQP 187
+ H E I P + P P P
Sbjct: 9778 RYEEHEEYITEPEKPIPVKPVPEEPVPTKPKAPP 9811
Score = 30.0 bits (66), Expect = 1.4
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 41 ELIPMRSEPLRKKKKVDPKKDQEAKERL-KRKIRKLEKATQELIPIEDF---ITPLKFLD 96
++IP + P+ KK + P K+ E ++ + K K++ P ED I LK +
Sbjct: 10845 KIIPEKKVPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPPPAPPKEDVKEKIFQLKAIP 10904
Query: 97 KAR--ERPQVELTFEET-------ERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEAL 147
K + E+PQV E T E++ L + +E + + +R E ++ +
Sbjct: 10905 KKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEPKV 10964
Query: 148 EELQLESPKLHAEAIKRDPNLFPFEK 173
E +LE K+ A+ P P E+
Sbjct: 10965 EPKKLE--KVKKPAVPEPPPPKPVEE 10988
Score = 28.9 bits (63), Expect = 3.2
Identities = 14/60 (23%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 43 IPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERP 102
+P + + +KK V PKK++ ++ +K+E+ + ++P E+ + P++ ++ E P
Sbjct: 10187 VPEIKKKVTEKKVVIPKKEEAPPAKVPEVPKKVEE-KRIILPKEEEVLPVEVTEEPEEEP 10245
Score = 28.9 bits (63), Expect = 3.2
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 43 IPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERP 102
+P + + KK+ V P K + E + E +E + +E ++ + + E
Sbjct: 10325 VPEKKVLVPKKEAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFH 10384
Query: 103 QVELTFEETERRAL--LLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAE 160
+VE FEE E + +K ++E ++E+ + ++E EA E E PK +
Sbjct: 10385 EVEEYFEEGEFHEVEEFIKLEQHRVEEEHRVEK--VHRVIEV-FEAEEVEVFEKPKAPPK 10441
Query: 161 AIKRDPNLFPFEKEGPHYTPPIPNYQPP 188
+ + P +K T +P +PP
Sbjct: 10442 GPEISEKIIPPKKPP---TKVVPRKEPP 10466
Score = 28.1 bits (61), Expect = 5.5
Identities = 37/167 (22%), Positives = 73/167 (43%), Gaps = 14/167 (8%)
Query: 41 ELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARE 100
E P + + KK + K A ++++ K+ + ++LIP E TP + K E
Sbjct: 10026 EAPPAKVPEVPKKPVPEKKVPVPAPKKVEAPPAKVPEVPKKLIPEEKKPTP---VPKKVE 10082
Query: 101 RPQVELTFEETERRALLLKKWSLYKQQERKMERDTI--RAMLEAQQEALEELQLESPKLH 158
P ++ ++R + +L +++E E + + +L ++E L E + P+
Sbjct: 10083 APPPKV----PKKREPVPVPVALPQEEEVLFEEEIVPEEEVLPEEEEVLPEEEEVLPE-E 10137
Query: 159 AEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFK 205
E + + + P E+E PP Y P E + +V +V+ K
Sbjct: 10138 EEVLPEEEEIPPEEEE----VPPEEEYVPEEEEFVPEEEVLPEVKPK 10180
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 45 MRSEPLRKKKKVDPKKDQEAKERLKR----KIRKLEKATQELI---PIEDFITPLKFLDK 97
++ E R+++++ ++++ ++RLKR ++ + E+ Q L P E+ L ++
Sbjct: 579 LKREEERRQQRLKREQEERLEQRLKREEVERLEQEERREQRLKREEPEEERRQQLLKSEE 638
Query: 98 ARERPQVELTFEETERRALLLKKWSLYKQQERKM------ERDTIRAMLEAQQEALEELQ 151
ER Q +L E+ ERR LK+ ++ E+++ ER E Q++A E ++
Sbjct: 639 QEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQELAEEEQEQARERIK 698
Query: 152 LESPK----LHAEAIKRDPNLF--PFEKEG 175
PK L +EA R ++ P ++EG
Sbjct: 699 SRIPKWQWQLESEADARQSKVYSRPRKQEG 728
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 22 TWQTQLRETHQRAS--LLSFWELIPMRSEPLRKKKKVDPKK----DQEAKERLKRKIRKL 75
TWQ Q E +R L + L R LR +++ ++ ++E KE+ +R+ R+
Sbjct: 768 TWQWQAEEKSERGRQRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRRER 827
Query: 76 EKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLK-----KWSLYKQQERK 130
EK Q L E L+ ++A++ + E +E + R + KW ++ERK
Sbjct: 828 EKELQFLEEEEQ----LQRRERAQQLQEEEDGLQEDQERRRSQEQRRDQKWRWQLEEERK 883
Query: 131 MERDTIRAMLEAQQEALEELQL 152
R T+ A Q++ +E QL
Sbjct: 884 RRRHTLYAKPALQEQLRKEQQL 905
Score = 36.6 bits (83), Expect = 0.015
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 46 RSEPLRKK---KKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKAR--- 99
R + LR++ ++ K QE +ERL++++R ++ +E + + LK ++ R
Sbjct: 503 REQQLRREQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQL--LKREEEKRLEQ 560
Query: 100 ERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHA 159
ER + L E+ ERR LLK+ +QQ K E++ LE + + E +LE +
Sbjct: 561 ERREQRLKREQEERRDQLLKREEERRQQRLKREQE---ERLEQRLKREEVERLEQEERRE 617
Query: 160 EAIKRD 165
+ +KR+
Sbjct: 618 QRLKRE 623
Score = 33.1 bits (74), Expect = 0.17
Identities = 21/109 (19%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 46 RSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDK-ARERPQV 104
R + LR+++++ ++++E E+ + R+ ++ +E D++ + ++ +ER +
Sbjct: 415 REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQ 474
Query: 105 ELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLE 153
+L ++ E R ++W +++ER+ +++ L +QE E +L+
Sbjct: 475 QLKRDQEEERR---ERWLKLEEEERREQQERREQQLRREQEERREQRLK 520
Score = 30.8 bits (68), Expect = 0.85
Identities = 25/130 (19%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 46 RSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVE 105
R + R+++++ ++++E +E+ R+ ++ E+ Q+L + + + + R + +
Sbjct: 341 REQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQ 400
Query: 106 LTFEETERRALLLKK-WSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKR 164
L E+ RR L++ L ++Q+ + E++ R + +QE E+ + + +KR
Sbjct: 401 LRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKR 460
Query: 165 DPNLFPFEKE 174
+ E+E
Sbjct: 461 EEETERHEQE 470
Score = 28.9 bits (63), Expect = 3.2
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 25/139 (17%)
Query: 41 ELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARE 100
E + E L ++++ K+ ++ +ER RK +KL++ ++L+ E P K + RE
Sbjct: 934 EQLQQEEEQLLREER--EKRRRQERERQYRKDKKLQQKEEQLLGEE----PEKRRRQERE 987
Query: 101 R----------PQVELTFEETERR------ALLLKKWSLYKQQERKMERDTIRAML---E 141
+ + +L EE E+R KK L +++E+ + + + L E
Sbjct: 988 KKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERE 1047
Query: 142 AQQEALEELQLESPKLHAE 160
Q EELQ E +L E
Sbjct: 1048 RQYREEEELQQEEEQLLGE 1066
Score = 28.5 bits (62), Expect = 4.2
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 29/148 (19%)
Query: 48 EPLRKKKKVDPKKDQEAKERLKRKIRKLE---KATQELIPIEDFITPLKF--------LD 96
E R+++++ ++ ++A+ER+K +I K + ++ + + + P K +
Sbjct: 677 EEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQE 736
Query: 97 KARERPQVELTFEETER----------RALLLKKWSLYKQQERKMERDTIRAMLEAQQEA 146
+ R R + EL ++E ER R +W ++ ER +R + R L Q+E
Sbjct: 737 EKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQRE- 795
Query: 147 LEELQLESPKLHAEAIKRDPNLFPFEKE 174
+L+ E E +R+ P E+E
Sbjct: 796 -RQLRAE------ERQQREQRFLPEEEE 816
Score = 28.5 bits (62), Expect = 4.2
Identities = 26/127 (20%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 23 WQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQEL 82
WQ + R + L + R + +++K ++++E K R + RK + Q L
Sbjct: 1286 WQQRDRHFPEEEQLEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLL 1345
Query: 83 IPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEA 142
E+ PL+ ++ R+ + EL +E R+ L ++ +++ERK ++ + +
Sbjct: 1346 QEREE--QPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEEQQLRCQE 1403
Query: 143 QQEALEE 149
+++ L +
Sbjct: 1404 REQQLRQ 1410
Score = 28.1 bits (61), Expect = 5.5
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 51 RKKKKVDPKKDQEAKERLKRK--IRKLEKATQELIPIEDFITPLKFLDKARERPQVELTF 108
R++++ +++E KE KR+ +RK E+ QE P + RE + E
Sbjct: 230 RRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEP-----------QRQRELQEEEEQL 278
Query: 109 EETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNL 168
+ ER+ L ++ +QQ+R +R E ++ +E + E + + +R
Sbjct: 279 RKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERREQQEERREQQ 338
Query: 169 FPFEKE 174
E+E
Sbjct: 339 LRREQE 344
Score = 27.3 bits (59), Expect = 9.4
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 24 QTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELI 83
+ QLR H R E + E + +++ +K +E +++L+R+ R+ K QE
Sbjct: 1658 EQQLR--HDRDRKFREEEQLLQEGEEQQLRRQERDRKFREEEQQLRRQERE-RKFLQEEQ 1714
Query: 84 PIEDFITPLKFLDKARERPQVELT-FEETERRALLLKKWSLY----KQQERKMERDTIRA 138
+ KF ++ + R + E ER +L++ L +QQ R+ ERD
Sbjct: 1715 QLRRQELERKFREEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFR 1774
Query: 139 MLEAQQEALEELQLES 154
E ++ EE QL S
Sbjct: 1775 EEEQLRQEREEQQLRS 1790
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 38.5 bits (88), Expect = 0.004
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 28 RETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQE---AKERLKRKIRKLEKATQELIP 84
++ H+R L P R + + +K D KKD+E ++ K + LE+ +
Sbjct: 94 KDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKA 153
Query: 85 IEDFITPLKFLDKA-RERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQ 143
E+ KFL KA RE ++ +E E R +L++ ++++RK +D R MLE
Sbjct: 154 EEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEE----ERKKRKQFQDLGRKMLEDP 209
Query: 144 QE 145
QE
Sbjct: 210 QE 211
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 38.5 bits (88), Expect = 0.004
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 52 KKKKVDPK----KDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQV--- 104
K K++D K + Q + E ++ + R+ E+ ++ + E K +K RER Q
Sbjct: 484 KLKRLDEKLGILEKQPSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEK 543
Query: 105 ELTFEETERRALLL-KKWSLYKQQERKMERDT-IRAMLEAQQEALEELQLESPKLHAEAI 162
EL E+ ++R + +K K+ ER+ E++ ++ M E ++E EL+ E KL +
Sbjct: 544 ELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKEC--ELEKEREKLEEKIE 601
Query: 163 KRDPNLFP 170
R+PNL P
Sbjct: 602 PREPNLEP 609
Score = 32.7 bits (73), Expect = 0.22
Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 17/109 (15%)
Query: 48 EPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELT 107
E RK+++ + ++ +E +R KL++ ++L +E +P + ++ RE+
Sbjct: 460 ERARKRREEEERRMEE--QRKAACAEKLKRLDEKLGILEKQPSPEEIREREREK------ 511
Query: 108 FEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPK 156
E ER L K+ ++QER+ ER+ R E QQE +EL+ E K
Sbjct: 512 --EREREKELEKE----QEQEREKEREKDR---ERQQEKEKELEKEQEK 551
>gi|117414154 sodium channel associated protein 2 isoform b [Homo
sapiens]
Length = 939
Score = 38.1 bits (87), Expect = 0.005
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 27 LRETHQRAS--LLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELI- 83
LR+T++ S L ++I ++E +RK K +KD+ K RL+ KI ++EK TQE +
Sbjct: 708 LRKTNESDSDALRIKCKIIDDQTETIRKLKDCLQEKDEHIK-RLQEKITEIEKCTQEQLD 766
Query: 84 ----PIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKM-ERDTIRA 138
+++ + L+ ++ +E+ + +L +E E + Y RK ++ +
Sbjct: 767 EKSSQLDEVLEKLERHNERKEKLKQQLKGKEVELEEIR----KAYSTLNRKWHDKGELLC 822
Query: 139 MLEAQ-QEALEELQLESPKLHAEAIK 163
LE Q +E E+ + + KL AE K
Sbjct: 823 HLETQVKEVKEKFENKEKKLKAERDK 848
>gi|117414162 sodium channel associated protein 2 isoform a [Homo
sapiens]
Length = 1032
Score = 38.1 bits (87), Expect = 0.005
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 27 LRETHQRAS--LLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELI- 83
LR+T++ S L ++I ++E +RK K +KD+ K RL+ KI ++EK TQE +
Sbjct: 801 LRKTNESDSDALRIKCKIIDDQTETIRKLKDCLQEKDEHIK-RLQEKITEIEKCTQEQLD 859
Query: 84 ----PIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKM-ERDTIRA 138
+++ + L+ ++ +E+ + +L +E E + Y RK ++ +
Sbjct: 860 EKSSQLDEVLEKLERHNERKEKLKQQLKGKEVELEEIR----KAYSTLNRKWHDKGELLC 915
Query: 139 MLEAQ-QEALEELQLESPKLHAEAIK 163
LE Q +E E+ + + KL AE K
Sbjct: 916 HLETQVKEVKEKFENKEKKLKAERDK 941
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 37.7 bits (86), Expect = 0.007
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 26 QLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAK-----ERLKRKIRKLEKATQ 80
+LRET QR +L E L K P ++Q K RL+R++ +L+ A +
Sbjct: 2112 ELRETQQRNNL-----------EALPHSHKTSPMEEQSLKLDSLEPRLQRELERLQAALR 2160
Query: 81 ELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQ---ERKMERDTIR 137
+ E +++ +KA++ + L+ +T+ L++ +++ Q ER E+ ++
Sbjct: 2161 QTEARE-----IEWREKAQD---LALSLAQTKASVSSLQEVAMFLQASVLERDSEQQRLQ 2212
Query: 138 AMLEAQQEALEELQLESP 155
LE + ALE+ +L SP
Sbjct: 2213 DELELTRRALEKERLHSP 2230
Score = 32.3 bits (72), Expect = 0.29
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 1 MTASVLRSISLALRPTSGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKV---- 56
M + L +SL L+ + + Q Q++E + S+L E +PM + +K V
Sbjct: 1453 MQKAALELLSLDLKKRNQEVDLQQEQIQELEKCRSVL---EHLPMAVQEREQKLTVQREQ 1509
Query: 57 --DPKKDQEAKER-LKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETER 113
+ +KD+E + L+ ++ +LEK Q + + LK E +EL EE
Sbjct: 1510 IRELEKDRETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALEL--EENHH 1567
Query: 114 RALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLH 158
+ +K + +R+ +R + + +E +ELQ +S ++H
Sbjct: 1568 KMECQQKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIH 1612
Score = 32.0 bits (71), Expect = 0.38
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 30/182 (16%)
Query: 16 TSGLLGTWQTQLRETHQ---------RASLLSFWE-LIPMRSEPLRKKKKVDPKKDQ--- 62
T+G+L QTQL+E + R L + E + + + +K+V+ K Q
Sbjct: 965 TTGIL---QTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVA 1021
Query: 63 --EAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKK 120
+++ +++++++ + TQE I+ + RE+ + L+ E E+R L+L++
Sbjct: 1022 QDDSQRLVEQEVQEKLRETQEYNRIQK--------ELEREKASLTLSLMEKEQRLLVLQE 1073
Query: 121 WSLYKQQERKMERDTIRAMLEAQQE---ALEELQLESPKLHAEAIKRDPNLFPFEKEGPH 177
+QQE R ++ Q+E +E L+ E + A+ + ++ L E E H
Sbjct: 1074 ADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLE-ELEASH 1132
Query: 178 YT 179
T
Sbjct: 1133 IT 1134
Score = 29.3 bits (64), Expect = 2.5
Identities = 37/176 (21%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 6 LRSISLALRPTSGLLGTWQTQLRETHQRA---SLLSFWELIPMRSEPLRKKKKVDPKKD- 61
L I L+LR L T + ++E + S L M+ K+K+V+ +++
Sbjct: 1685 LEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSLEHMKLILRDKEKEVECQQEH 1744
Query: 62 ----QEAKERLKRKIRKLEKATQELIPI-----EDFITPLKFLDKARERPQVELTFEETE 112
QE K++L+++++ L + E + ++ + + L +ARE+ +++ +++
Sbjct: 1745 IHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQ 1804
Query: 113 ----RRALLLKKWSL----YKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAE 160
+RAL + L +QQ+ + + + ++ +A Q ALE+ + + H E
Sbjct: 1805 LDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGE 1860
>gi|4506467 radixin [Homo sapiens]
Length = 583
Score = 37.7 bits (86), Expect = 0.007
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 29 ETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDF 88
E HQ+ + E + E K+K+ ++ +E ERLK+ + KA +EL E+
Sbjct: 312 EKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLKQIEEQTIKAQKEL---EEQ 368
Query: 89 ITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKM--------ERDTIRAML 140
LD+ R+R + E E ERRA K ++ KQ +M E A +
Sbjct: 369 TRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLAAELAEFTAKI 428
Query: 141 EAQQEALEELQLESPKLHAEAIKRDPNLFPFEKE------GPHYTPPIPNYQPPEGRYND 194
+EA ++ + E+ + +A +L ++E P PP P P E +++
Sbjct: 429 ALLEEAKKKKEEEATEWQHKAFAAQEDLEKTKEELKTVMSAPPPPPPPPVIPPTENEHDE 488
>gi|221139761 zinc finger protein 853 [Homo sapiens]
Length = 659
Score = 37.4 bits (85), Expect = 0.009
Identities = 30/137 (21%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 24 QTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELI 83
Q QL++ Q LL + + + L++++++ ++ Q+ +E+L+++ Q+L+
Sbjct: 191 QEQLQQQVQEQQLLQQQQEQLQQQQLLQQQEQLQQQQFQQQQEQLQQQ--------QQLL 242
Query: 84 PIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQ 143
++ + + ++ Q +L + E++ L++ L +QQE+ +++ + +L+ Q
Sbjct: 243 LLQQ---QGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLLQQQEQ-LQQQQQQQLLQQQ 298
Query: 144 QEALEELQLESPKLHAE 160
QE L++ QL+ P L E
Sbjct: 299 QEQLQQQQLQPPPLEPE 315
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 37.4 bits (85), Expect = 0.009
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 29 ETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDF 88
+ HQ+ +++ WE+ + + + K+ + ER +R+ + KA +E +ED
Sbjct: 156 DLHQK-HVVNSWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDK 214
Query: 89 ITPLKFLDKARERP--QVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLE 141
+ L + E +VE T + E+ LL ++W L + +E + + + R E
Sbjct: 215 LQAEALLQQMEELKLKEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAE 269
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 37.4 bits (85), Expect = 0.009
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 29 ETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDF 88
+ HQ+ +++ WE+ + + + K+ + ER +R+ + KA +E +ED
Sbjct: 156 DLHQK-HVVNSWEMQKEEKKQQEATAEQENKRYENEYERARREALERMKAEEERRQLEDK 214
Query: 89 ITPLKFLDKARERP--QVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLE 141
+ L + E +VE T + E+ LL ++W L + +E + + + R E
Sbjct: 215 LQAEALLQQMEELKLKEVEATKLKKEQENLLKQRWELERLEEERKQMEAFRQKAE 269
>gi|50658082 centrosomal protein 70 kDa [Homo sapiens]
Length = 597
Score = 37.4 bits (85), Expect = 0.009
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 10 SLALRPT-SGLLGTWQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERL 68
+L PT GLL + Q QL+E+ + LS SE L +K ++ + Q
Sbjct: 248 NLDASPTYKGLLMSLQNQLKESKSKIDALS--------SEKLNLQKDLETRPTQHELRLY 299
Query: 69 KRKIRKLEKATQELIPIEDFITPLKFLDKARE 100
K++++KLEKA ++ + +++ I K D ++
Sbjct: 300 KQQVKKLEKALKKNVKLQELINHKKAEDTEKK 331
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 37.0 bits (84), Expect = 0.012
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 46 RSEPLRKKKKVDPKKDQEAKERLKRKIRKL--EKATQELIPIEDFITPLKFLDKARERPQ 103
R + L K K+ + + ++ +ER +R+ K ++A QE + L+ R+
Sbjct: 392 RHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQER---------KRALEAERQARV 442
Query: 104 VELTFEETERRALLLKKWSLYKQQERKMERDTIR-----------AMLEAQQEALEELQL 152
EL + E+ A + ++ +Q++ K D R A+ AQQEA+EELQ
Sbjct: 443 EELLMKRKEQEARIEQQ----RQEKEKAREDAARERARDREERLAALTAAQQEAMEELQK 498
Query: 153 ESPKLHAEAIKRDPNLFPFEKE 174
+ H E+I+R KE
Sbjct: 499 KIQLKHDESIRRHMEQIEQRKE 520
Score = 31.6 bits (70), Expect = 0.50
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 47 SEPLRKKKKVDPKKDQEAK----ERLKRKIRKLEKA--TQELIPIEDFITPLK--FLDKA 98
S P RK+ + KK E K ++L+ K+R+ EK Q+L+ E + K LD+
Sbjct: 286 SSPSRKRTIAESKKKHEEKQMKAQQLREKLRE-EKTLKLQKLLEREKDVRKWKEELLDQR 344
Query: 99 RERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQ-------------QE 145
R + +L E +R L +++E K+ LEAQ ++
Sbjct: 345 RRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQ 404
Query: 146 ALEELQLESPKLHAEAIKRD 165
L ELQ E + E RD
Sbjct: 405 RLNELQEERQRRQEEKQARD 424
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 37.0 bits (84), Expect = 0.012
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 26/142 (18%)
Query: 46 RSEPLRKKKKVDPKKDQEAKERLKRKIRKL--EKATQELIPIEDFITPLKFLDKARERPQ 103
R + L K K+ + + ++ +ER +R+ K ++A QE + L+ R+
Sbjct: 638 RHDVLSKLKEYEQRLNELQEERQRRQEEKQARDEAVQER---------KRALEAERQARV 688
Query: 104 VELTFEETERRALLLKKWSLYKQQERKMERDTIR-----------AMLEAQQEALEELQL 152
EL + E+ A + ++ +Q++ K D R A+ AQQEA+EELQ
Sbjct: 689 EELLMKRKEQEARIEQQ----RQEKEKAREDAARERARDREERLAALTAAQQEAMEELQK 744
Query: 153 ESPKLHAEAIKRDPNLFPFEKE 174
+ H E+I+R KE
Sbjct: 745 KIQLKHDESIRRHMEQIEQRKE 766
Score = 31.6 bits (70), Expect = 0.50
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 47 SEPLRKKKKVDPKKDQEAK----ERLKRKIRKLEKA--TQELIPIEDFITPLK--FLDKA 98
S P RK+ + KK E K ++L+ K+R+ EK Q+L+ E + K LD+
Sbjct: 532 SSPSRKRTIAESKKKHEEKQMKAQQLREKLRE-EKTLKLQKLLEREKDVRKWKEELLDQR 590
Query: 99 RERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQ-------------QE 145
R + +L E +R L +++E K+ LEAQ ++
Sbjct: 591 RRMMEEKLLHAEFKREVQLQAIVKKAQEEEAKVNEIAFINTLEAQNKRHDVLSKLKEYEQ 650
Query: 146 ALEELQLESPKLHAEAIKRD 165
L ELQ E + E RD
Sbjct: 651 RLNELQEERQRRQEEKQARD 670
>gi|148839339 nexilin (F actin binding protein) [Homo sapiens]
Length = 675
Score = 36.6 bits (83), Expect = 0.015
Identities = 26/113 (23%), Positives = 65/113 (57%), Gaps = 5/113 (4%)
Query: 48 EPLRKKKKVDPKK--DQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVE 105
E L ++++ + KK ++EA++RL+ + R E+A ++++ ++ + K +++
Sbjct: 252 EELERQRQENRKKQAEEEARKRLEEEKRAFEEARRQMVNEDEENQDTAKIFKGYRPGKLK 311
Query: 106 LTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLH 158
L+FEE ER+ +K ++ R++E + +A EA++ + + +SP+++
Sbjct: 312 LSFEEMERQRREDEKRKAEEEARRRIEEEK-KAFAEARRNMV--VDDDSPEMY 361
Score = 31.6 bits (70), Expect = 0.50
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 10/107 (9%)
Query: 52 KKKKVDPKKDQEAKERLK----RKIRKLE-----KATQELIPIEDFITPLKFLDKARERP 102
KK D +K++E KER+K ++IR E K + L + D + ++
Sbjct: 186 KKNFEDLEKEREEKERIKYEEDKRIRYEEQRPSLKEAKCLSLVMDDEIESEAKKESLSPG 245
Query: 103 QVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEE 149
+++LTFEE ER+ +K ++ +++E + RA EA+++ + E
Sbjct: 246 KLKLTFEELERQRQENRKKQAEEEARKRLEEEK-RAFEEARRQMVNE 291
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 36.2 bits (82), Expect = 0.020
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 29 ETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDF 88
E HQ+ + E + E K+K+ ++ +E ERLK+ + +KA QEL E+
Sbjct: 312 EKHQKQMERAMLENEKKKREMAEKEKEKIEREKEELMERLKQIEEQTKKAQQEL---EEQ 368
Query: 89 ITPLKFLDKARERPQVELTFEETERR-ALLLKKWSLYKQQERKMERDTIRAMLEAQQEAL 147
L++ R+R Q E ER+ A K+ L +++K ++ + + +
Sbjct: 369 TRRALELEQERKRAQSEAEKLAKERQEAEEAKEALLQASRDQKKTQEQLALEMAELTARI 428
Query: 148 EELQLESPKLHAEAIK 163
+L++ K +EA++
Sbjct: 429 SQLEMARQKKESEAVE 444
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 36.2 bits (82), Expect = 0.020
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 24/131 (18%)
Query: 62 QEAKERLKRKIRKLE----------KATQELIPIEDFITPLKFLDKARERPQVELTFEET 111
Q +ERL+ + KL KA++ I D + LKFL+K Q+E ++
Sbjct: 686 QATQERLRGLLEKLTAIAQHRMTTYKASENYILCSDTRSQLKFLEKL---DQLEKQRKDL 742
Query: 112 ERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRDPNLFPF 171
E R +LLK + R + D + L+ + + L++L+L A+ RD NL
Sbjct: 743 EEREMLLK-----AAKSRSNKEDPEQLRLKQKAKELQQLEL------AQIQHRDANLTAL 791
Query: 172 EKEGPHYTPPI 182
GP P+
Sbjct: 792 AAIGPRKKRPL 802
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 35.8 bits (81), Expect = 0.026
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)
Query: 52 KKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQV------E 105
K++ + K+Q ++++ I++ E+A ++L E I ++ + +E+ QV E
Sbjct: 1297 KQRTIQQLKEQLNNQKVEEAIQQYERACKDLNVKEKIIEDMRMTLEEQEQTQVEQDQVLE 1356
Query: 106 LTFEETERRALLLKKW-------SLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLH 158
EE ER A L+KW Q E + +L +ELQ K +
Sbjct: 1357 AKLEEVERLATELEKWKEKCNDLETKNNQRSNKEHENNTDVLGKLTNLQDELQESEQKYN 1416
Query: 159 AEAIK 163
A+ K
Sbjct: 1417 ADRKK 1421
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 35.8 bits (81), Expect = 0.026
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 23 WQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQEL 82
W Q E + LL + E LRK + +Q +ER +++ R+ E+ QE
Sbjct: 650 WLQQEEEERRHQELLQ--KKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQER 707
Query: 83 IPIEDFITPLKFLDKAR----ERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRA 138
E + ++ R ER Q E +E E +AL L+K L ++ E K +++
Sbjct: 708 REQERREQERQLAEQERRREQERLQAERELQERE-KALRLQKEQLQRELEEKKKKE---- 762
Query: 139 MLEAQQEALEELQLESPKLHAEA 161
E Q+ A +LQ E K EA
Sbjct: 763 --EQQRLAERQLQEEQEKKAKEA 783
Score = 29.6 bits (65), Expect = 1.9
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 45 MRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQV 104
+ E +KK ++ EA+ + + + R+L QE E+ + L K +E Q
Sbjct: 618 LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQE----EEERRHQELLQKKKEEEQE 673
Query: 105 ELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKR 164
L R+A K+ + ++QER+ + R +QE E+ + E + AE +R
Sbjct: 674 RL------RKAAEAKRLAEQREQERREQER--REQERREQERREQERREQERQLAEQERR 725
Score = 27.7 bits (60), Expect = 7.2
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 25/134 (18%)
Query: 51 RKKKKVDPKKDQEAKERLK-----RKIRKL-----EKATQELIPIEDF--------ITPL 92
+ KKK KK +E + R K R++R L E+ QEL+ +
Sbjct: 622 KAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEA 681
Query: 93 KFLDKARERPQVELTFEETERRALLLKKWSLYKQ------QERKMERDTIRAMLEAQQEA 146
K L + RE+ + E E ERR ++ +Q QER+ E++ ++A E QE
Sbjct: 682 KRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAEREL-QER 740
Query: 147 LEELQLESPKLHAE 160
+ L+L+ +L E
Sbjct: 741 EKALRLQKEQLQRE 754
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 35.8 bits (81), Expect = 0.026
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 23 WQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQEL 82
W Q E + LL + E LRK + +Q +ER +++ R+ E+ QE
Sbjct: 646 WLQQEEEERRHQELLQ--KKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQER 703
Query: 83 IPIEDFITPLKFLDKAR----ERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRA 138
E + ++ R ER Q E +E E +AL L+K L ++ E K +++
Sbjct: 704 REQERREQERQLAEQERRREQERLQAERELQERE-KALRLQKEQLQRELEEKKKKE---- 758
Query: 139 MLEAQQEALEELQLESPKLHAEA 161
E Q+ A +LQ E K EA
Sbjct: 759 --EQQRLAERQLQEEQEKKAKEA 779
Score = 29.6 bits (65), Expect = 1.9
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 45 MRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQV 104
+ E +KK ++ EA+ + + + R+L QE E+ + L K +E Q
Sbjct: 614 LAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQE----EEERRHQELLQKKKEEEQE 669
Query: 105 ELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKR 164
L R+A K+ + ++QER+ + R +QE E+ + E + AE +R
Sbjct: 670 RL------RKAAEAKRLAEQREQERREQER--REQERREQERREQERREQERQLAEQERR 721
Score = 27.7 bits (60), Expect = 7.2
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 25/134 (18%)
Query: 51 RKKKKVDPKKDQEAKERLK-----RKIRKL-----EKATQELIPIEDF--------ITPL 92
+ KKK KK +E + R K R++R L E+ QEL+ +
Sbjct: 618 KAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAEA 677
Query: 93 KFLDKARERPQVELTFEETERRALLLKKWSLYKQ------QERKMERDTIRAMLEAQQEA 146
K L + RE+ + E E ERR ++ +Q QER+ E++ ++A E QE
Sbjct: 678 KRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAEREL-QER 736
Query: 147 LEELQLESPKLHAE 160
+ L+L+ +L E
Sbjct: 737 EKALRLQKEQLQRE 750
>gi|19557702 surfeit 6 [Homo sapiens]
Length = 361
Score = 35.8 bits (81), Expect = 0.026
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 41 ELIPMRSEPLRKKKKVDPKKDQEAKE-RLKRKIRKLEKATQELIPIEDFITPLKFLDKAR 99
EL P E R++K+ +K ++ KE R K K RK E+AT+ +E TP + R
Sbjct: 136 ELSPAALEKRRRRKQERDRKKRKRKELRAKEKARKAEEATEAQEVVE--ATPEGACTEPR 193
Query: 100 ERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAML-----EAQQEALEELQLES 154
E P L F + E + + K Q RK +R ++ L ++ LE LQ
Sbjct: 194 EPP--GLIFNKVE----VSEDEPASKAQRRKEKRQRVKGNLTPLTGRNYRQLLERLQARQ 247
Query: 155 PKL 157
+L
Sbjct: 248 SRL 250
>gi|47519616 tropomyosin 2 (beta) isoform 2 [Homo sapiens]
Length = 284
Score = 35.4 bits (80), Expect = 0.034
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 48 EPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPL--------KFLDKAR 99
+ L+KK K + ++ E +K KLE+A ++ E + L + LD+A+
Sbjct: 44 QALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQ 103
Query: 100 ERPQVELT-FEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLH 158
ER L EE E+ A + ER M+ RAM + ++ L+E+QL+ K
Sbjct: 104 ERLATALQKLEEAEKAA---------DESERGMKVIENRAMKDEEKMELQEMQLKEAKHI 154
Query: 159 AE 160
AE
Sbjct: 155 AE 156
>gi|42476296 tropomyosin 2 (beta) isoform 1 [Homo sapiens]
Length = 284
Score = 35.4 bits (80), Expect = 0.034
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 18/122 (14%)
Query: 48 EPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPL--------KFLDKAR 99
+ L+KK K + ++ E +K KLE+A ++ E + L + LD+A+
Sbjct: 44 QALQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEADVASLNRRIQLVEEELDRAQ 103
Query: 100 ERPQVELT-FEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLH 158
ER L EE E+ A + ER M+ RAM + ++ L+E+QL+ K
Sbjct: 104 ERLATALQKLEEAEKAA---------DESERGMKVIENRAMKDEEKMELQEMQLKEAKHI 154
Query: 159 AE 160
AE
Sbjct: 155 AE 156
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
[Homo sapiens]
Length = 6907
Score = 35.4 bits (80), Expect = 0.034
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 4 SVLRSISLALRPTSGLLGTWQTQLRET-------HQRASLLSFWELIPMRSEPLRKKKK- 55
S LR +SL G + +W+ LR++ HQ + L W + S R++K
Sbjct: 6656 SRLRQLSLLWEAAQGAVDSWRGGLRQSLMQCQDFHQLSQNLLLW----LASAKNRRQKAH 6711
Query: 56 -VDPKKDQEAKERLKRKIRKLEKATQELIPIEDFI 89
DPK D A +R++ +LEK E P D +
Sbjct: 6712 VTDPKADPRALLECRRELMQLEKELVERQPQVDML 6746
Score = 29.6 bits (65), Expect = 1.9
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 16/113 (14%)
Query: 65 KERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLY 124
+E L+ +RK E+ + I+D L + + Q++ T +E + +K+ +
Sbjct: 3290 EESLEMPLRKQEELESTVAHIQDLTEKLGMISSPEAKLQLQYTLQELVSKNSAMKE--AF 3347
Query: 125 KQQE-------------RKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKR 164
K QE RKME D I L + L + P + EA++R
Sbjct: 3348 KAQETEAERYLENYKCYRKMEED-IYTNLSKMETVLGQSMSSLPLSYREALER 3399
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
[Homo sapiens]
Length = 6885
Score = 35.4 bits (80), Expect = 0.034
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 4 SVLRSISLALRPTSGLLGTWQTQLRET-------HQRASLLSFWELIPMRSEPLRKKKK- 55
S LR +SL G + +W+ LR++ HQ + L W + S R++K
Sbjct: 6633 SRLRQLSLLWEAAQGAVDSWRGGLRQSLMQCQDFHQLSQNLLLW----LASAKNRRQKAH 6688
Query: 56 -VDPKKDQEAKERLKRKIRKLEKATQELIPIEDFI 89
DPK D A +R++ +LEK E P D +
Sbjct: 6689 VTDPKADPRALLECRRELMQLEKELVERQPQVDML 6723
Score = 29.6 bits (65), Expect = 1.9
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 16/113 (14%)
Query: 65 KERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLY 124
+E L+ +RK E+ + I+D L + + Q++ T +E + +K+ +
Sbjct: 3290 EESLEMPLRKQEELESTVAHIQDLTEKLGMISSPEAKLQLQYTLQELVSKNSAMKE--AF 3347
Query: 125 KQQE-------------RKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKR 164
K QE RKME D I L + L + P + EA++R
Sbjct: 3348 KAQETEAERYLENYKCYRKMEED-IYTNLSKMETVLGQSMSSLPLSYREALER 3399
>gi|81295816 nasopharyngeal epithelium specific protein 1 [Homo
sapiens]
Length = 551
Score = 35.4 bits (80), Expect = 0.034
Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 32 QRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKR-------KIRKLEKATQELIP 84
Q+A LL+ +L KKK + + +ER++R ++R +++ Q+
Sbjct: 325 QKAELLAQEKLADQMVMEFTKKKMAREAEFEAEQERIRREKEKEIARLRAMQEKAQDYQA 384
Query: 85 IEDFITPL------------KFLDKARERPQVELTFEETERRALLLKKWSLYKQQERKME 132
+D + K + AR++ + E ++ + K+ +L Q +R +
Sbjct: 385 EQDALRAKRNQEVADREWRRKEKENARKKMETEAELRKSRLEQVAFKEHALAVQVQR--D 442
Query: 133 RDTIRAMLEAQQEALEELQLESPK------LHAEAIKR 164
RD +L AQ+E +E+ +LE K HA ++R
Sbjct: 443 RDEFERILRAQREQIEKERLEEEKKATGRLQHANELRR 480
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 35.0 bits (79), Expect = 0.045
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 51 RKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVELTFEE 110
R++KK + +K++E KER KR+ +++ + +E E + K RER + E +E
Sbjct: 147 RERKKEEREKERERKERKKRERKQVGEKEEERKEKE------RKERKKRERNRKERK-KE 199
Query: 111 TERRALLLKKWSLYKQQERKMERDTIR 137
ER+ +K K++ERK ER R
Sbjct: 200 RERKERRERKKERKKKEERKKERQKDR 226
Score = 30.8 bits (68), Expect = 0.85
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 51 RKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLD-KARERPQVELTFE 109
+K+KK + +E KER +++ RK E+ + E+ + + K RER QV E
Sbjct: 117 KKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEE 176
Query: 110 ETERRALLLKKWSLYKQQERKMERD 134
E + + +K ++ERK ER+
Sbjct: 177 ERKEKERKERKKRERNRKERKKERE 201
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 20/129 (15%)
Query: 46 RSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKFLDKARERPQVE 105
+ E +KK+ K+++E +E+ KRK K EK + E K RER +
Sbjct: 91 KKEERERKKRRREKENKEGEEKEKRK--KKEKKERGRTSKE---------GKERERKEER 139
Query: 106 LTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPKLHAEAIKRD 165
E ER KK K++ERK + R + ++E +E K E KR+
Sbjct: 140 KREERKERER---KKEEREKERERKERKKRERKQVGEKEEERKE------KERKERKKRE 190
Query: 166 PNLFPFEKE 174
N +KE
Sbjct: 191 RNRKERKKE 199
Score = 27.3 bits (59), Expect = 9.4
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 23 WQTQLRETHQRASLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQEL 82
WQ+++RE + I R E +K+++ + KK++ +E+ KR+ K K +
Sbjct: 34 WQSEIRERERE---------IETRKEG-KKERESERKKERREREKRKREREKERKRERGK 83
Query: 83 IPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQE-RKMERDTIRAMLE 141
+ + K R R + EE E+R KK +E ++ ER R E
Sbjct: 84 KEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREE 143
Query: 142 AQQEALEELQLESPKLHAEAIKRD 165
++ ++ + E + E KR+
Sbjct: 144 RKERERKKEEREKERERKERKKRE 167
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 35.0 bits (79), Expect = 0.045
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 24 QTQLRETHQRASLLSFWELIPMRSE--------PLRKKKKVDPKKDQEAKERLKRKIRKL 75
+ QL+ + + L S +LI M + P +KK+K K+ ++ KE+ + K ++
Sbjct: 78 EEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEK 137
Query: 76 EKATQELIPIEDFITPLKFLDKARERPQVELTFEETERRALLLKKWSLYKQQ 127
++ + TP P V T TE + KKW+L + +
Sbjct: 138 ATVSENVAASAAATTPATSPPAVNTSPSVPTTTTATEEQVSEPKKWNLRRNR 189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,177,081
Number of Sequences: 37866
Number of extensions: 382481
Number of successful extensions: 3229
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 298
Number of HSP's that attempted gapping in prelim test: 2667
Number of HSP's gapped (non-prelim): 782
length of query: 206
length of database: 18,247,518
effective HSP length: 97
effective length of query: 109
effective length of database: 14,574,516
effective search space: 1588622244
effective search space used: 1588622244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.