Guide to the Human Genome
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Name: CEP70 Sequence: fasta or formatted (597aa) NCBI GI: 50658082
Description:

centrosomal protein 70 kDa

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         22           2
 C cysteine            1.7         10           1
 D aspartate           5.9         35           2
 E glutamate          10.6         63           3
 F phenylalanine       2.3         14           2
 G glycine             1.8         11           2
 H histidine           2.0         12           1
 I isoleucine          5.2         31           2
 K lysine              9.7         58           3
 L leucine            13.1         78           2
 M methionine          2.5         15           2
 N asparagine          5.4         32           2
 P proline             3.2         19           1
 Q glutamine           9.2         55           3
 R arginine            4.2         25           1
 S serine              6.5         39           4
 T threonine           3.7         22           1
 V valine              6.2         37           1
 W tryptophan          0.5          3           1
 Y tyrosine            2.7         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 70 kDa 
MYO18A                0.037   myosin 18A isoform b 
MYO18A                0.037   myosin 18A isoform a 
MYH9                  0.037   myosin, heavy polypeptide 9, non-muscle 
GOLGA4                0.034   golgi autoantigen, golgin subfamily a, 4 
KTN1                  0.034   kinectin 1 isoform c 
LOC283767             0.033   golgi autoantigen, golgin subfamily a-like 
CDK5RAP2              0.033   CDK5 regulatory subunit associated protein 2 isoform...
CDK5RAP2              0.033   CDK5 regulatory subunit associated protein 2 isoform...
CCDC88A               0.033   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.033   coiled-coil domain containing 88A isoform 1 
MYH10                 0.032   myosin, heavy polypeptide 10, non-muscle 
CCDC18                0.032   sarcoma antigen NY-SAR-41 
ROCK1                 0.031   Rho-associated, coiled-coil containing protein kinase...
GCC2                  0.030   GRIP and coiled-coil domain-containing 2 
GOLGB1                0.030   golgi autoantigen, golgin subfamily b, macrogolgin ...
MNS1                  0.030   meiosis-specific nuclear structural 1 
TCHH                  0.030   trichohyalin 
CENPE                 0.030   centromere protein E 
KTN1                  0.029   kinectin 1 isoform a 
KTN1                  0.029   kinectin 1 isoform a 
LOC440243             0.029   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC100132733          0.029   PREDICTED: similar to FLJ00310 protein 
RB1CC1                0.028   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.028   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
EEA1                  0.028   early endosome antigen 1, 162kD 
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.028   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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