LRRCC1 1993

Name: LRRCC1	Sequence: fasta or formatted (939aa)		NCBI GI: 117414154
Description: sodium channel associated protein 2 isoform b		Referenced in: Centrosome Coiled-Coil Proteins Leucine-rich Repeat Family
Other entries for this name: alt prot [1032aa] sodium channel associated protein 2 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 52 2 C cysteine 1.8 17 1 D aspartate 6.2 58 2 E glutamate 12.2 115 2 F phenylalanine 1.7 16 2 G glycine 1.8 17 1 H histidine 3.3 31 2 I isoleucine 6.7 63 2 K lysine 10.9 102 2 L leucine 12.2 115 2 M methionine 1.9 18 1 N asparagine 5.0 47 2 P proline 2.0 19 2 Q glutamine 7.3 69 3 R arginine 5.3 50 2 S serine 6.0 56 3 T threonine 4.2 39 2 V valine 3.7 35 1 W tryptophan 0.5 5 1 Y tyrosine 1.6 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sodium channel associated protein 2 isoform b [Homo... LRRCC1 0.987 sodium channel associated protein 2 isoform a [Homo... EEA1 0.050 early endosome antigen 1, 162kD GOLGA4 0.050 golgi autoantigen, golgin subfamily a, 4 CENPE 0.047 centromere protein E LOC727832 0.046 golgi autoantigen, golgin subfamily a-like MYH11 0.046 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.046 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.046 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.046 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH4 0.046 myosin, heavy polypeptide 4, skeletal muscle MYH8 0.044 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH1 0.044 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH9 0.043 myosin, heavy polypeptide 9, non-muscle ERC1 0.043 RAB6-interacting protein 2 isoform delta FILIP1 0.043 filamin A interacting protein 1 LOC283685 0.042 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC440243 0.042 PREDICTED: Putative golgin subfamily A member 6-lik... ERC1 0.041 RAB6-interacting protein 2 isoform epsilon GOLGB1 0.041 golgi autoantigen, golgin subfamily b, macrogolgin ... UACA 0.041 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.041 uveal autoantigen with coiled-coil domains and ankyr... MYH2 0.041 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.041 myosin, heavy chain 2, skeletal muscle, adult [Homo... LOC283767 0.041 golgi autoantigen, golgin subfamily a-like LOC283685 0.041 PREDICTED: golgi autoantigen, golgin subfamily a-li... MYH10 0.041 myosin, heavy polypeptide 10, non-muscle MYH3 0.040 myosin, heavy chain 3, skeletal muscle, embryonic [H... TCHH 0.040 trichohyalin AKAP9 0.040 A-kinase anchor protein 9 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.