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Search of human proteins with 25777600
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
(953 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens] 1894 0.0
gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens] 77 8e-14
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 49 3e-05
gi|117553580 adaptor-related protein complex 3, delta 1 subunit ... 47 8e-05
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens] 46 1e-04
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 46 2e-04
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 46 2e-04
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 44 0.001
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 44 0.001
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 43 0.001
gi|118600967 shroom family member 4 [Homo sapiens] 42 0.003
gi|221219020 NYD-SP11 protein [Homo sapiens] 42 0.003
gi|4504425 high-mobility group box 1 [Homo sapiens] 42 0.003
gi|239752449 PREDICTED: hypothetical protein [Homo sapiens] 42 0.003
gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens] 42 0.004
gi|164419749 SWI/SNF-related matrix-associated actin-dependent r... 42 0.004
gi|21071044 SWI/SNF-related matrix-associated actin-dependent re... 42 0.004
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 42 0.004
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 42 0.004
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 41 0.005
gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo s... 41 0.006
gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo s... 41 0.006
gi|117553584 adaptor-related protein complex 3, delta 1 subunit ... 41 0.006
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 40 0.008
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 40 0.008
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 40 0.008
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 40 0.010
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 40 0.010
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 40 0.010
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 40 0.010
>gi|25777600 proteasome 26S non-ATPase subunit 1 [Homo sapiens]
Length = 953
Score = 1894 bits (4905), Expect = 0.0
Identities = 953/953 (100%), Positives = 953/953 (100%)
Query: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA 60
MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA
Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFA 60
Query: 61 ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE
Sbjct: 61 ALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPE 120
Query: 121 GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS
Sbjct: 121 GEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYS 180
Query: 181 LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED 240
LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED
Sbjct: 181 LKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKED 240
Query: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETE 300
NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETE
Sbjct: 241 NLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIASVPGSTNTGTVPGSEKDSDSMETE 300
Query: 301 EKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV 360
EKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV
Sbjct: 301 EKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAV 360
Query: 361 RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL 420
RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL
Sbjct: 361 RNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEAL 420
Query: 421 QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG 480
QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG
Sbjct: 421 QLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLG 480
Query: 481 LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ 540
LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ
Sbjct: 481 LGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQ 540
Query: 541 HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR 600
HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR
Sbjct: 541 HEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIR 600
Query: 601 RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC 660
RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC
Sbjct: 601 RLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICC 660
Query: 661 AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK 720
AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK
Sbjct: 661 AGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDK 720
Query: 721 HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS 780
HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS
Sbjct: 721 HDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLS 780
Query: 781 LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK 840
LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK
Sbjct: 781 LAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAK 840
Query: 841 KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRY 900
KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRY
Sbjct: 841 KKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRY 900
Query: 901 QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD 953
QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD
Sbjct: 901 QPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD 953
>gi|25777602 proteasome 26S non-ATPase subunit 2 [Homo sapiens]
Length = 908
Score = 77.0 bits (188), Expect = 8e-14
Identities = 153/733 (20%), Positives = 295/733 (40%), Gaps = 116/733 (15%)
Query: 44 KIEVLYEDEG-FRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIA 102
K++ +YE+ +++FAA + S + + E L Y L + EYV +
Sbjct: 105 KLKEIYENMAPGENKRFAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAG 164
Query: 103 KCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDV 162
+ K+ E D + +++P L +V ++ + + +A + +E ++D+
Sbjct: 165 EV----AKEWQELDDAEKVQREP----LLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDM 216
Query: 163 FEKTILESNDVPGMLAYSLKLCMSLMQNKQF-----RNKVLRVLVKIYMNLEKPDFINVC 217
EK I E+ AY+ K+C+ L + + +LR + ++ + F
Sbjct: 217 LEKDIDEN-------AYA-KVCLYLTSCVNYVPEPENSALLRCALGVFRKFSR--FPEAL 266
Query: 218 QCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIAS 277
+ + L+D + V DI ++++ Q+ F L LS ++ + +++
Sbjct: 267 RLALMLNDMELVEDIFTSC---KDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSN 323
Query: 278 VPGSTNTGTVPGSEKDSDSMETEEKTSSAFVGKTPEASPEPKDQTLKMIKILSGEMAIEL 337
V ++N + ++ D ME P+ D K
Sbjct: 324 VQLNSNFLALA---RELDIME-----------------PKVPDDIYKT------------ 351
Query: 338 HLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDN-LEWLARA 396
HL+ NN + V ++ + A+ N F++ D+ L D+ +WL +
Sbjct: 352 HLE----NNR-----FGGSGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKN 402
Query: 397 TNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGD 456
+ +A ASLG+I L + YL Y + G L A G++++ +
Sbjct: 403 KDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSED----YIKSGALLACGIVNSGVRNE 458
Query: 457 -------IIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTG 509
+ DY+L+ +++ +R G GLGLA G+ R+DV LL + D +
Sbjct: 459 CDPALALLSDYVLH-----NSNTMRLGSIFGLGLAYAGSNREDVLTLLLP-VMGDSKSSM 512
Query: 510 EAAG---LALGLVMLGSKNAQAIEDMVGYAQETQHEKI----LRGLAVGIALVMYGRMEE 562
E AG LA G++ +GS N ++ E ++ R L +G+ L G+ E
Sbjct: 513 EVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDTYARWLPLGLGLNHLGKGEA 572
Query: 563 ADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESL 622
+A++ +L +P + AY GSGN +++LLH+ S+ D + +
Sbjct: 573 IEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHIC-SEHFDSKEKEEDKDK 631
Query: 623 GFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNY 682
+ ++ P+ + G A+ LGI G + + + Y
Sbjct: 632 KEKKDKDKKEAPADMG---------AHQGVAV-LGIALIAMGEEIGAEMALRTFGHLLRY 681
Query: 683 ----VRQGALIASALIMIQQTEITCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILD 738
+R+ +A ALI + P++N L SK +D +V + +I A G++
Sbjct: 682 GEPTLRRAVPLALALISVSN-----PRLNILDTL-SKFSHDADPEV--SYNSIFAMGMVG 733
Query: 739 AGGHNVTISLQSR 751
+G +N ++ R
Sbjct: 734 SGTNNARLAAMLR 746
Score = 39.3 bits (90), Expect = 0.018
Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 49/368 (13%)
Query: 391 EWLARATNWAKFTATASLGVIHKGHEKE---ALQLMATYLPKDTSPGSAYQEGGGLYALG 447
++L + ++ K A + G+++ G E AL L++ Y+ +++ G ++ LG
Sbjct: 431 KYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNT----MRLGSIFGLG 486
Query: 448 LIHANHGGDIIDYLLNQLKNASNDIVRHGG--SLGLGLAAMGTARQDVYD-LLKTNLYQD 504
L +A + + LL + S + G +L G+ A+G+ DV +L+T + +
Sbjct: 487 LAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKS 546
Query: 505 DAVTGEAAG----LALGLVMLGSKNA-------------------QAIEDMVGYAQETQH 541
+ + L LGL LG A + D+ YA
Sbjct: 547 ETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNV 606
Query: 542 EKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYT------VAMAYCGS-- 593
K+ + L + EE E +DK G + +A+ G
Sbjct: 607 LKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALIAMGEEI 666
Query: 594 GNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGA 652
G A+R H+ + +RRA +L I P +S S +P V Y +
Sbjct: 667 GAEMALRTFGHL-LRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNS 725
Query: 653 AMALGICCAGTGNKEAINLLEPM----TNDPVNYVRQGALIASALIMIQQTEITCPKVNQ 708
A+G+ +GT N +L + DP N +A L + + +T +
Sbjct: 726 IFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFM--VRLAQGLTHLGKGTLTLCPYHS 783
Query: 709 FRQLYSKV 716
RQL S+V
Sbjct: 784 DRQLMSQV 791
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 48.5 bits (114), Expect = 3e-05
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 814 PAPLEVPKEK---EKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
P+ L V EK EKEKV K KKK+KEKEK+++EK E ++E++EK+KE
Sbjct: 679 PSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKEKE 738
Query: 871 PEPNFQLLDNPARVMPA 887
+ ++ P + P+
Sbjct: 739 KHKHEKIKVEPVALAPS 755
Score = 38.1 bits (87), Expect = 0.039
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 819 VPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEP 873
V KEKEK K KKK++EK KK+++K E ++ + K ++K K P P
Sbjct: 609 VRKEKEKHK-----------DKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAP 652
Score = 38.1 bits (87), Expect = 0.039
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 814 PAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEP 873
P L KEK KEK K K K+++K+KKE+EK + ++ +KE++E++K +
Sbjct: 686 PEKLFEEKEKVKEK---------EKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREKE 736
Query: 874 NFQLLDNPARVMPAQL 889
+ +V P L
Sbjct: 737 KEKHKHEKIKVEPVAL 752
Score = 37.7 bits (86), Expect = 0.051
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 9/60 (15%)
Query: 814 PAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEE-KEKKKEPE 872
P+ +EV K+ +KE + K KKKEK+++++ E+ D++++K++ KEK+K+ E
Sbjct: 516 PSSVEVKKKLKKE--------LKTKMKKKEKQRDREREKDKNKDKSKEKDKVKEKEKDKE 567
Score = 33.5 bits (75), Expect = 0.97
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 821 KEKEKEKVSTAV-LSITAKAKKKEKEKEKKEE-EKMEVDEAEKKEEKEKKKEPEPNFQLL 878
K KE E V V L K+KEK K+KK++ EK + D+ ++++EK K K E +
Sbjct: 591 KIKEFEDVDPKVKLKDGLVRKEKEKHKDKKKDREKGKKDKDKREKEKVKDKGREDKMKAP 650
Query: 879 DNPARVMPAQLKV-LTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEE 937
P + P +L + L P T P S+ ++ K E+ E++ E K ++
Sbjct: 651 APPLVLPPKELALPLFSPATASRVPAMLPSLLPVLPEK-LFEEKEKVKEKEKKKDKKEKK 709
Query: 938 EEQEPE 943
+++E E
Sbjct: 710 KKKEKE 715
Score = 33.1 bits (74), Expect = 1.3
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 814 PAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
P PL E EK K+ ++V + K KK+ K K KK+E++ + E EK + K+K KE +
Sbjct: 502 PEPLHKVYE-EKTKLPSSV-EVKKKLKKELKTKMKKKEKQRD-REREKDKNKDKSKEKD 557
>gi|117553580 adaptor-related protein complex 3, delta 1 subunit
isoform 2 [Homo sapiens]
Length = 1153
Score = 47.0 bits (110), Expect = 8e-05
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 807 KPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKE 866
KP + P++ + E K + + K KK K+KEKK +EK + EKK+EKE
Sbjct: 808 KPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKER--DKEKKKEKE 865
Query: 867 KKKEPEP 873
KKK P+P
Sbjct: 866 KKKSPKP 872
Score = 35.4 bits (80), Expect = 0.26
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 820 PKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKE----EKEKKKEPEPNF 875
PK+KEK+ K KKKEKEK+K + K + EK+E +K+ KK+P +
Sbjct: 844 PKKKEKKHKEKE----RDKEKKKEKEKKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSE 899
Query: 876 QLLDNPAR 883
+ P +
Sbjct: 900 EAAGEPVQ 907
Score = 33.1 bits (74), Expect = 1.3
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
Query: 797 MPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEV 856
+P V+ KS E KEK+KEK +KK+ K KK++ + E
Sbjct: 834 VPMVEKKSKKPKKKEKKHKEKERDKEKKKEK------------EKKKSPKPKKKKHRKEK 881
Query: 857 DEAEKKEEKEKKKEP 871
+E K ++K KK+ P
Sbjct: 882 EERTKGKKKSKKQPP 896
>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 46.2 bits (108), Expect = 1e-04
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 790 GLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEK- 848
G K K + K+ K K K++ + + T K K+KEKEKEK
Sbjct: 26 GRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKE 85
Query: 849 KEEEKMEVDEAEKKEEKEKKKE 870
KE+EK + E EKK++K+KKK+
Sbjct: 86 KEKEKEKEKEKEKKKKKKKKKK 107
Score = 45.4 bits (106), Expect = 2e-04
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEE 852
K K K K K +T + +K +T K K+KEKEKEK++E+
Sbjct: 33 KKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKEKEKEKEKEKEKEKEK 92
Query: 853 KMEVDEAEKKEEKEKKKEPEPN 874
+ E ++ +KK++K+KKK+ + N
Sbjct: 93 EKEKEKKKKKKKKKKKKKKKLN 114
Score = 34.3 bits (77), Expect = 0.57
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 18/95 (18%)
Query: 791 LNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVS-------TAVLSITAKAKKKE 843
L+K + M KV + K S + + K+K+K+K + T T K KK+
Sbjct: 4 LDKGVAMEKVHVITE-KESAWKRGRKKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRT 62
Query: 844 KEKEK------KEEEKMEVDEAEKKEEKEKKKEPE 872
+K KE+EK E EK++EKEK+KE E
Sbjct: 63 TTTKKTTTTTTKEKEK----EKEKEKEKEKEKEKE 93
Score = 31.2 bits (69), Expect = 4.8
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEV 856
E KEKEKEK K KKK+K+K+KK++ +V
Sbjct: 79 EKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLNAKV 117
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 45.8 bits (107), Expect = 2e-04
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKE--------KEKKEEEKMEVDEAEKKEEKEKKK 869
E KEK KEK T K K+KE+E K+KKEEE+ E +E E++EEKE+++
Sbjct: 31 EKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEE 90
Query: 870 EPE 872
+ E
Sbjct: 91 KEE 93
Score = 42.7 bits (99), Expect = 0.002
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
K KEK K K K+ EK KEK+EEEK + +KK+E+E+++E E
Sbjct: 28 KRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEE 79
Score = 40.0 bits (92), Expect = 0.010
Identities = 21/53 (39%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKE-KEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
K+K+KE T T + ++KE K KEK++E++ E ++ +K +E EK+KE E
Sbjct: 4 KKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKE 56
Score = 40.0 bits (92), Expect = 0.010
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
E K KEKE+ K K++E+ +E++EEE+ E +E EK+E + +KK+
Sbjct: 48 ETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKK 100
Score = 39.7 bits (91), Expect = 0.014
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKK---EEEKMEVDEAEKKEEKEKKKEPE 872
E +E E+E+ K K+KEKEK+KK E++ E +E EKK ++++KK+ E
Sbjct: 14 EETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKE 71
Score = 37.0 bits (84), Expect = 0.088
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 790 GLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKK 849
G K+ + K + K K + + +EK++++ + +++E+E+E+K
Sbjct: 27 GKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREEEEEEEEEEK 86
Query: 850 EEEKMEVDEAEKKEEKEKKKEPE 872
EEE+ E KK++K ++KE E
Sbjct: 87 EEEEKEEGRRRKKKKKRRRKEEE 109
Score = 35.4 bits (80), Expect = 0.26
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 841 KKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
KK+K+K+K+ EE E +E E++EEKE K++
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRK 30
Score = 35.0 bits (79), Expect = 0.33
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 838 KAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
K KKK+K++ ++ EE E +E E+KE K K+K E
Sbjct: 1 KKKKKKKKETEETEETEETEEEEEKEGKRKEKRKE 35
Score = 35.0 bits (79), Expect = 0.33
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
E ++K K K + +++E+E+EK+EEEK E +KK+++ +K+E E
Sbjct: 56 EEEEKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEE 110
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 45.8 bits (107), Expect = 2e-04
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 798 PKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVD 857
PK + K T P + KEK K++V+ K ++K K++E K+E K E+
Sbjct: 630 PKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKEIK 689
Query: 858 EAEKKE-EKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKD 916
+ EKKE +KE KKE P + V + K + E + K L K
Sbjct: 690 KEEKKEPKKEVKKETPPK----EVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDA----KK 741
Query: 917 TSEDIEELVEPVAAHGPKIEEEEQ 940
+S + E +P AA PK+ ++E+
Sbjct: 742 SSTPLSEAKKP-AALKPKVPKKEE 764
Score = 40.4 bits (93), Expect = 0.008
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
+V + KEK + + KK+EKEK KKE K E KKEEK KK+E
Sbjct: 627 DVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEKPKKEE 679
Score = 37.7 bits (86), Expect = 0.051
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 803 KSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK 862
K+ KPS EVP ++E V V A K + KEK +++ +V +KK
Sbjct: 595 KTETKPSV----TEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKK 650
Query: 863 EEKEKKKE 870
EEKEK K+
Sbjct: 651 EEKEKPKK 658
Score = 37.4 bits (85), Expect = 0.067
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEK---KEEKEKKKEPEPN 874
EV KE +KE+ + + KE +KE K+EEK EV + EK KE K+ K+ + +
Sbjct: 683 EVKKEIKKEEKKEPKKEVKKETPPKEVKKEVKKEEKKEVKKEEKEPKKEIKKLPKDAKKS 742
Query: 875 FQLLDNPARVMPAQLKVLTMPETCRYQPF---KPLSIGGIIILKDTSEDIEELVEPV 928
L + + KV E+ + KP G I ++K + E + V
Sbjct: 743 STPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEKGKIKVIKKEGKAAEAVAAAV 799
Score = 35.0 bits (79), Expect = 0.33
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 814 PAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEK-KKEPE 872
P EV +++ + A T K + K K ++KKEE++ E KKE+K KKE +
Sbjct: 615 PVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKEEK 674
Query: 873 P 873
P
Sbjct: 675 P 675
Score = 31.2 bits (69), Expect = 4.8
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 796 KMPKVQYKSNCKPSTFAYPAPLE--VPKEKEKEKVSTAVLSITAKAKKKEKEKE-KKEEE 852
K+PK KS+ S PA L+ VPK++E K + K K+K K K KKE +
Sbjct: 734 KLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVA---AGKPKEKGKIKVIKKEGK 790
Query: 853 KMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGII 912
E A PA+ + A+ +++ PE + F+ L +
Sbjct: 791 AAEAVAAAVGTGATTAAVMAAAGIAAIGPAKELEAERSLMSSPEDLT-KDFEELKAEEVD 849
Query: 913 ILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPF 948
+ KD + EL+E EE+ +E EP E +
Sbjct: 850 VTKDIKPQL-ELIED--------EEKLKETEPVEAY 876
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/36 (55%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 838 KAKKKEKEKEKKEEEKMEV-DEAEKKEEKEKKKEPE 872
K KK++KE++KK+EEK++ +E++KKEE+EKKK E
Sbjct: 64 KRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQE 99
Score = 38.1 bits (87), Expect = 0.039
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK---EEKEKKKEPEPN 874
+ P++K+K + KKK++EK K EEE + +E EKK EE+ KK+E +
Sbjct: 51 KAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAK 110
Query: 875 FQLLDNPARVM 885
Q + A M
Sbjct: 111 RQQEEEAAAQM 121
Score = 38.1 bits (87), Expect = 0.039
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKK---EEEKMEVDEAEKKEEKE---KKKEPEPN 874
++KE++K + ++KKKE+E++KK EE K + ++A++++E+E + KE E +
Sbjct: 68 EDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEES 127
Query: 875 FQL 877
QL
Sbjct: 128 IQL 130
Score = 37.7 bits (86), Expect = 0.051
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 817 LEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
LE K K+++K KA+++ K+KE++E++K + +E +K+EE+ K+++ E
Sbjct: 60 LEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEE 115
Score = 32.7 bits (73), Expect = 1.7
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 821 KEKEKEKVSTAVLSITAKA-----KKKEKEKEKKEE-EKMEVDEAEKKEEKEKKKEPE 872
KE+ K+ + +KA K+ E +K KKE+ E+ + DE + K E+E KK+ E
Sbjct: 34 KERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEE 91
Score = 30.8 bits (68), Expect = 6.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 808 PSTFAYPAPLE----VPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKE 863
P+ PA +E +P KEK+ +S + K K KKE K D+ ++ E
Sbjct: 2 PAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLE 61
Query: 864 EKEKKKE 870
+ ++KKE
Sbjct: 62 DDKRKKE 68
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 43.5 bits (101), Expect = 0.001
Identities = 20/36 (55%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Query: 838 KAKKKEKEKEKKEEEKMEV-DEAEKKEEKEKKKEPE 872
K KK++KE++KK+EEK++ +E++KKEE+EKKK E
Sbjct: 64 KRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQE 99
Score = 38.1 bits (87), Expect = 0.039
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK---EEKEKKKEPEPN 874
+ P++K+K + KKK++EK K EEE + +E EKK EE+ KK+E +
Sbjct: 51 KAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAK 110
Query: 875 FQLLDNPARVM 885
Q + A M
Sbjct: 111 RQQEEEAAAQM 121
Score = 38.1 bits (87), Expect = 0.039
Identities = 21/63 (33%), Positives = 41/63 (65%), Gaps = 6/63 (9%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKK---EEEKMEVDEAEKKEEKE---KKKEPEPN 874
++KE++K + ++KKKE+E++KK EE K + ++A++++E+E + KE E +
Sbjct: 68 EDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEKEES 127
Query: 875 FQL 877
QL
Sbjct: 128 IQL 130
Score = 37.7 bits (86), Expect = 0.051
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 817 LEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
LE K K+++K KA+++ K+KE++E++K + +E +K+EE+ K+++ E
Sbjct: 60 LEDDKRKKEDKERKKKDEEKVKAEEESKKKEEEEKKKHQEEERKKQEEQAKRQQEE 115
Score = 32.7 bits (73), Expect = 1.7
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 821 KEKEKEKVSTAVLSITAKA-----KKKEKEKEKKEE-EKMEVDEAEKKEEKEKKKEPE 872
KE+ K+ + +KA K+ E +K KKE+ E+ + DE + K E+E KK+ E
Sbjct: 34 KERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESKKKEE 91
Score = 30.8 bits (68), Expect = 6.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 808 PSTFAYPAPLE----VPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKE 863
P+ PA +E +P KEK+ +S + K K KKE K D+ ++ E
Sbjct: 2 PAERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLE 61
Query: 864 EKEKKKE 870
+ ++KKE
Sbjct: 62 DDKRKKE 68
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 43.1 bits (100), Expect = 0.001
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 832 VLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKV 891
+L ++ ++ ++E+E+E +EEE+ E +E E +EE+E+++E E + +P R+ Q
Sbjct: 1061 LLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVA 1120
Query: 892 LTMPETCRYQPF--------KPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPE 943
+ R +PF K I + + SE E L EP +E+ P
Sbjct: 1121 IK-----RKRPFVLKKKRGRKRRRINSSVTTETISETTEVLNEPFD------NSDEERPM 1169
Query: 944 P 944
P
Sbjct: 1170 P 1170
Score = 36.6 bits (83), Expect = 0.11
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 830 TAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQL 889
T +L A ++E+E EK+ E ME +KEE+E + Q +PA+V ++
Sbjct: 988 TPILISNAAVSEEEREAEKEAERLMEQASCWEKEEQEILSTRANSRQ---SPAKVQ-SKN 1043
Query: 890 KVLTMPETCRYQPFKPLS--IGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEP 947
K L PE+ +P++ G ++ L S + EE E + EEEE E E E
Sbjct: 1044 KYLHSPES------RPVTGERGQLLELSKESSEEEEEEEDEEEEEEEEEEEEDEEEEEEE 1097
Query: 948 FE 949
E
Sbjct: 1098 EE 1099
Score = 35.4 bits (80), Expect = 0.26
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
+E +E+ V T+ +K E + K EEE+ E +E E++EE+E+ +E E
Sbjct: 1322 EENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEE 1373
Score = 32.3 bits (72), Expect = 2.2
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 819 VPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
+P+E+ + + + A +S +K ++ K EE+ E +E E++EE+E++ E E
Sbjct: 1319 LPQEENRREETCAPVSPNTSPGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEE 1372
Score = 30.4 bits (67), Expect = 8.2
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 803 KSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK 862
+ N + T A +P P EK ++ + K +E+E+E++EEE+ E +E ++
Sbjct: 1322 EENRREETCAPVSPNTSPGEKPEDDL----------IKPEEEEEEEEEEEEEEEEEEGEE 1371
Query: 863 EEKEKKKEPEPN 874
EE E +P+
Sbjct: 1372 EEGGGNVEKDPD 1383
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 42.0 bits (97), Expect = 0.003
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 812 AYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEP 871
A+P P P EK ++ A + +++++++E++EEE+ E +E E++EE+ +++E
Sbjct: 1098 AFPPPRPPPPNWEKYRLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEE 1157
Query: 872 EPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPVAAH 931
E Q + A PE QP +PLS G + + S+ + E A H
Sbjct: 1158 ELPPQYFSSETSGSCA-----LNPEEVLEQP-QPLSFGHLEGSRQGSQSVPAEQESFALH 1211
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 42.0 bits (97), Expect = 0.003
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQL 877
E +E+E+E+ V +E+E+E+KEEE+ E + EK+EE++KKK+ E +
Sbjct: 2248 EEEREEEEEREEEEV---------REEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEE 2298
Query: 878 LDNPARVMPAQLKVLTMPET 897
+ V + ++++ ET
Sbjct: 2299 VQEKEEVFEEKEEIMSEEET 2318
Score = 38.1 bits (87), Expect = 0.039
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 817 LEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
L +E+E+E+ + +++ KE+E+ EE+++E +E EKK++K++KK+ E
Sbjct: 2243 LSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEE 2298
Score = 35.8 bits (81), Expect = 0.20
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK-EEKEKKKEPEPNFQ 876
EV +E+E+ K + +++EK+K+KKE++K EV E E+ EEKE+ E
Sbjct: 2261 EVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETES 2320
Query: 877 LLD 879
L D
Sbjct: 2321 LSD 2323
Score = 35.4 bits (80), Expect = 0.26
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
EV E+ + ++L K + E+E++ EE+ E +E E +EE+E++KE E
Sbjct: 2219 EVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEE 2273
Score = 33.9 bits (76), Expect = 0.74
Identities = 18/59 (30%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKE----KEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
+V + + +E S + S+ + +K+E +E+E++EEE+ +E ++EE+E+K+E E
Sbjct: 2216 QVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEE 2274
Score = 32.0 bits (71), Expect = 2.8
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 9/62 (14%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKE--EEKMEVDEAEKKEEKEKKKEPEPNF 875
+V KE+E++K K KKKE+ +EK+E EEK E+ E+ E ++E E +
Sbjct: 2279 QVEKEEEEKKKKK-------KEKKKEEVQEKEEVFEEKEEIMSEEETESLSDEEEEEESC 2331
Query: 876 QL 877
L
Sbjct: 2332 SL 2333
>gi|4504425 high-mobility group box 1 [Homo sapiens]
Length = 215
Score = 42.0 bits (97), Expect = 0.003
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 816 PLEVPKEKEKEKVSTAVLSITAKAK---------KKEKEKEKKEEEKMEVDEAEKKEEKE 866
P E K KEK + + AK K K EK K+KKEEE+ E DE +++EE++
Sbjct: 143 PYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEED 202
Query: 867 KKKEPE 872
++ E E
Sbjct: 203 EEDEDE 208
Score = 33.9 bits (76), Expect = 0.74
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
++ + K K A + K K+K++E+++EE E +E E+ EE E ++E +
Sbjct: 158 DIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDD 212
Score = 32.7 bits (73), Expect = 1.7
Identities = 17/74 (22%), Positives = 38/74 (51%)
Query: 799 KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDE 858
K Y+ Y + + K K + + K+KKK++E+E +E+E+ E +E
Sbjct: 141 KQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEE 200
Query: 859 AEKKEEKEKKKEPE 872
++++E E++ + +
Sbjct: 201 EDEEDEDEEEDDDD 214
>gi|239752449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 170
Score = 42.0 bits (97), Expect = 0.003
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKK 869
E KEKEKEK K KKK+K+K+KK+++K + K++ K KKK
Sbjct: 103 EEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKK 154
Score = 39.3 bits (90), Expect = 0.018
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
E KEK+K+K K KKK+K+K+KK++ K + K+++K KKK+
Sbjct: 107 EKEKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKK 159
Score = 38.5 bits (88), Expect = 0.030
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
E K+K+K+K K KKK+K+K+KK + K + KK+ K+KKK+
Sbjct: 109 EKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKRKRKRKRKKKRKKKKKK 161
Score = 38.1 bits (87), Expect = 0.039
Identities = 16/33 (48%), Positives = 28/33 (84%)
Query: 838 KAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
+ +KKEKEKEKK+++K + + +KK++K+KKK+
Sbjct: 102 REEKKEKEKEKKKKKKKKKKKKKKKKKKKKKKK 134
Score = 31.6 bits (70), Expect = 3.7
Identities = 12/30 (40%), Positives = 26/30 (86%)
Query: 841 KKEKEKEKKEEEKMEVDEAEKKEEKEKKKE 870
++E++KEK++E+K + + +KK++K+KKK+
Sbjct: 101 QREEKKEKEKEKKKKKKKKKKKKKKKKKKK 130
>gi|239744307 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 486
Score = 41.6 bits (96), Expect = 0.004
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Query: 816 PLEVPKEKEKEKVSTAVLSITAKAK---------KKEKEKEKKEEEKMEVDEAEKKEEKE 866
P E K KEK + + AK K K K K+KKEEE+ E DE +++EEK+
Sbjct: 279 PYEKRSAKLKEKYEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKD 338
Query: 867 KKKEPEPNFQLLDNPARVMPAQLKVLTMPETCR 899
+ ++ E + D QL + PE R
Sbjct: 339 EDEDEEDDEDEEDGDDEQSHWQLFLACCPEDQR 371
Score = 35.4 bits (80), Expect = 0.26
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 813 YPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
Y + + K K + + AK+KKK++E+E +E+E+ E +E ++ E++E ++ E
Sbjct: 291 YEKDIAAYRAKGKHDAANNGVVKAAKSKKKKEEEENEEDEEDEEEEKDEDEDEEDDEDEE 350
>gi|164419749 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1 isoform b [Homo sapiens]
Length = 1042
Score = 41.6 bits (96), Expect = 0.004
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 822 EKEKEK-VSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNF-QLLD 879
EK+KEK VS+ L + AKA K EKE + + EEKM+ D A++ E K+ E +F Q
Sbjct: 54 EKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSA 113
Query: 880 NPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELV 925
+ P +K L P + + +S G + E+ EEL+
Sbjct: 114 QKSPTSPLNMK-LGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELL 158
Score = 31.6 bits (70), Expect = 3.7
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 820 PKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLD 879
P ++E + A TA +K EK+KEK ++ A K + EK+ +PE ++
Sbjct: 31 PSTSQEEGAAAAATEATAATEKGEKKKEKNVSS-FQLKLAAKAPKSEKEMDPEYEEKMKA 89
Query: 880 NPARVMPAQLKVLTM-----PETCRYQPFKPLS--IGGIIILKDTSEDIEELVEPVAAHG 932
+ A+ LK + + + P PL+ +G I KD + + L+
Sbjct: 90 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKD---EKQSLISAGDYRH 146
Query: 933 PKIEEEEQE 941
+ E+EE E
Sbjct: 147 RRTEQEEDE 155
>gi|21071044 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a1 isoform a [Homo sapiens]
Length = 1054
Score = 41.6 bits (96), Expect = 0.004
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 822 EKEKEK-VSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNF-QLLD 879
EK+KEK VS+ L + AKA K EKE + + EEKM+ D A++ E K+ E +F Q
Sbjct: 54 EKKKEKNVSSFQLKLAAKAPKSEKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFIQPSA 113
Query: 880 NPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELV 925
+ P +K L P + + +S G + E+ EEL+
Sbjct: 114 QKSPTSPLNMK-LGRPRIKKDEKQSLISAGDYRHRRTEQEEDEELL 158
Score = 31.6 bits (70), Expect = 3.7
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 820 PKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLD 879
P ++E + A TA +K EK+KEK ++ A K + EK+ +PE ++
Sbjct: 31 PSTSQEEGAAAAATEATAATEKGEKKKEKNVSS-FQLKLAAKAPKSEKEMDPEYEEKMKA 89
Query: 880 NPARVMPAQLKVLTM-----PETCRYQPFKPLS--IGGIIILKDTSEDIEELVEPVAAHG 932
+ A+ LK + + + P PL+ +G I KD + + L+
Sbjct: 90 DRAKRFEFLLKQTELFAHFIQPSAQKSPTSPLNMKLGRPRIKKD---EKQSLISAGDYRH 146
Query: 933 PKIEEEEQE 941
+ E+EE E
Sbjct: 147 RRTEQEEDE 155
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 41.6 bits (96), Expect = 0.004
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 791 LNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKE 850
LN+D+K+ + Q K++ + + L ++KE+E+ K K+KEKEKEK++
Sbjct: 70 LNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEK 129
Query: 851 EEKMEVDEAEKKE 863
E + E ++A E
Sbjct: 130 EREKEKEKATVSE 142
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 41.6 bits (96), Expect = 0.004
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 791 LNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKE 850
LN+D+K+ + Q K++ + + L ++KE+E+ K K+KEKEKEK++
Sbjct: 70 LNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKEEEENGERPRKKKEKEKEKEKEKEKEK 129
Query: 851 EEKMEVDEAEKKE 863
E + E ++A E
Sbjct: 130 EREKEKEKATVSE 142
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 41.2 bits (95), Expect = 0.005
Identities = 44/155 (28%), Positives = 60/155 (38%), Gaps = 18/155 (11%)
Query: 794 DLKMP--KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEE 851
D+K P K K + +P + P ++E + A + AK EKE KKEE
Sbjct: 760 DVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEE 819
Query: 852 EKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGI 911
K V E EK +E K KEP + PA + K E + + KP
Sbjct: 820 VKSPVKEEEKPQE-VKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKP------ 872
Query: 912 IILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPE 946
+EE EP A PK + E + E E
Sbjct: 873 --------KVEEKKEP-AVEKPKESKVEAKKEEAE 898
Score = 39.7 bits (91), Expect = 0.014
Identities = 27/74 (36%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 799 KVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEK-EKEKKEEEKMEVD 857
KV+ K + KP A E K KE A A KK K EK KK EEK + +
Sbjct: 913 KVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTE 972
Query: 858 EAEKKEEKEKKKEP 871
K+++K KEP
Sbjct: 973 AKAKEDDKTLSKEP 986
Score = 39.3 bits (90), Expect = 0.018
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 791 LNKDLKMPK--VQYKSNCKPSTFAYPAPLEV-----PKEKEKEKVSTAVLSITAK----- 838
L +D K P+ + K K P EV PK+ E+EK + K
Sbjct: 803 LKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKE 862
Query: 839 -AKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKV 891
A KKE K K EE+K E K+ + E KKE + + + P + PA+++V
Sbjct: 863 EAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEV 916
Score = 37.7 bits (86), Expect = 0.051
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKE----KEKVSTAVLSITAKAKKKE--KEK 846
K+ PKV+ K K P +V +KE K+KV T AK + KE K K
Sbjct: 867 KEAPKPKVEEK---KEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPK 923
Query: 847 EKKEEEKMEVDEAEKKEEKE--KKKEPEP 873
EK E K E D+A+ KE + +KKE P
Sbjct: 924 EKTEVAKKEPDDAKAKEPSKPAEKKEAAP 952
Score = 36.6 bits (83), Expect = 0.11
Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 35/145 (24%)
Query: 817 LEVPKEKEKEKV--------STAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEK--- 865
++V ++ EKE V + +T + +K+ KE+E KEEE E +EAE EE+
Sbjct: 444 IKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKS 503
Query: 866 ---EKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIE 922
E+ PE + PA+ K PE K+ ++
Sbjct: 504 PPAEEAASPEKEAKSPVKEEAKSPAEAK---SPE------------------KEEAKSPA 542
Query: 923 ELVEPVAAHGPKIEEEEQEPEPPEP 947
E+ P A P EE + PE P
Sbjct: 543 EVKSPEKAKSPAKEEAKSPPEAKSP 567
Score = 35.8 bits (81), Expect = 0.20
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 798 PKVQYKSNCKPSTFAYPAPL-EVPKEKEKEKVSTAV---LSITAKAKKKEKEKEKK---- 849
PK + K + K AP E PK K +EK AV +AKK+E E +KK
Sbjct: 851 PKTEEKKDSKKEE----APKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTP 906
Query: 850 EEE---KMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLK 890
E+E K+EV E K +EK + + EP+ P++ PA+ K
Sbjct: 907 EKEAPAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSK--PAEKK 948
Score = 35.4 bits (80), Expect = 0.26
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 814 PAPLEVPKE-KEKEKVSTAVLS-ITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEP 871
PA +EV ++ K KEK A AKAK+ K EKKE ++ + KEEK KK E
Sbjct: 911 PAKVEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAP---EKKDTKEEKAKKPEE 967
Query: 872 EP 873
+P
Sbjct: 968 KP 969
Score = 32.3 bits (72), Expect = 2.2
Identities = 36/137 (26%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 814 PAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE- 872
PA EKE + A+AK EKE+ K E ++A+ ++E K PE
Sbjct: 505 PAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEA 564
Query: 873 --PNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPVAA 930
P + +PA V + E + P + S K S EE P A
Sbjct: 565 KSPEKEEAKSPAEVKSPEKAKSPAKEEAK-SPAEAKSPE-----KAKSPVKEEAKSPAEA 618
Query: 931 HGPKIEEEEQEPEPPEP 947
P EE + E P
Sbjct: 619 KSPVKEEAKSPAEVKSP 635
Score = 31.6 bits (70), Expect = 3.7
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 803 KSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK 862
K KP+ AP + ++EK K AKAK+ +K KE K + ++AEK
Sbjct: 939 KEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL-SKEPSKPKAEKAEKS 997
Query: 863 EEKEKKKEPEPNFQLLDNPAR 883
++K P D A+
Sbjct: 998 SSTDQKDSKPPEKATEDKAAK 1018
Score = 31.2 bits (69), Expect = 4.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 815 APLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEP 871
+P E ++E S A + KAK KE E K EK + E E+ + EK K P
Sbjct: 614 SPAEAKSPVKEEAKSPAEVKSPEKAKSPTKE-EAKSPEKAKSPEKEEAKSPEKAKSP 669
>gi|154146191 heat shock 90kDa protein 1, alpha isoform 2 [Homo
sapiens]
Length = 732
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 813 YPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEV-----DEAEKKEEKEK 867
YP L V KE++KE K ++KEKE EK+ E+K E+ DE E+K++ +K
Sbjct: 216 YPITLFVEKERDKEVSDDEAEEKEDKEEEKEKE-EKESEDKPEIEDVGSDEEEEKKDGDK 274
Query: 868 KKEPEPNFQLLD 879
KK+ + + +D
Sbjct: 275 KKKKKIKEKYID 286
>gi|153792590 heat shock 90kDa protein 1, alpha isoform 1 [Homo
sapiens]
Length = 854
Score = 40.8 bits (94), Expect = 0.006
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 813 YPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEV-----DEAEKKEEKEK 867
YP L V KE++KE K ++KEKE EK+ E+K E+ DE E+K++ +K
Sbjct: 338 YPITLFVEKERDKEVSDDEAEEKEDKEEEKEKE-EKESEDKPEIEDVGSDEEEEKKDGDK 396
Query: 868 KKEPEPNFQLLD 879
KK+ + + +D
Sbjct: 397 KKKKKIKEKYID 408
>gi|117553584 adaptor-related protein complex 3, delta 1 subunit
isoform 1 [Homo sapiens]
Length = 1112
Score = 40.8 bits (94), Expect = 0.006
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 807 KPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKE 866
KP + P++ + E K + + K KK K+KEKK +EK + EKK+EKE
Sbjct: 717 KPLADSEKLPIQKHRNTETSKSPEKDVPMVEKKSKKPKKKEKKHKEKER--DKEKKKEKE 774
Query: 867 KKKE 870
KK E
Sbjct: 775 KKAE 778
Score = 35.0 bits (79), Expect = 0.33
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKE----K 848
K+ K + + + P PAP VP E E T A+ ++++K+ K
Sbjct: 773 KEKKAEDLDFWLSTTPPPAPAPAPAPVPSTDECEDAKTEAQGEEDDAEGQDQDKKSPKPK 832
Query: 849 KEEEKMEVDEAEKKEEKEKKKEP 871
K++ + E +E K ++K KK+ P
Sbjct: 833 KKKHRKEKEERTKGKKKSKKQPP 855
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 40.4 bits (93), Expect = 0.008
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
E+ EK +E+ L+ + K+KEK K+KKEE+K + +E E+ + KE + PE
Sbjct: 1434 ELDLEKSREESRKQALA-AKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPE 1487
Score = 33.5 bits (75), Expect = 0.97
Identities = 18/91 (19%), Positives = 45/91 (49%)
Query: 803 KSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK 862
++N S LE +E+ +++ A + +KK+KE++K+++E+ E ++ ++
Sbjct: 1423 EANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKEN 1482
Query: 863 EEKEKKKEPEPNFQLLDNPARVMPAQLKVLT 893
E + ++ E N + ++ + P T
Sbjct: 1483 SELPEDEDEEENDEDVEQEVPIEPPSATTTT 1513
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 40.4 bits (93), Expect = 0.008
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 818 EVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
E+ EK +E+ L+ + K+KEK K+KKEE+K + +E E+ + KE + PE
Sbjct: 1434 ELDLEKSREESRKQALA-AKREKRKEKRKKKKEEQKRKQEEDEENKPKENSELPE 1487
Score = 33.5 bits (75), Expect = 0.97
Identities = 18/91 (19%), Positives = 45/91 (49%)
Query: 803 KSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKK 862
++N S LE +E+ +++ A + +KK+KE++K+++E+ E ++ ++
Sbjct: 1423 EANKNASILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQEEDEENKPKEN 1482
Query: 863 EEKEKKKEPEPNFQLLDNPARVMPAQLKVLT 893
E + ++ E N + ++ + P T
Sbjct: 1483 SELPEDEDEEENDEDVEQEVPIEPPSATTTT 1513
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 40.4 bits (93), Expect = 0.008
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 25/136 (18%)
Query: 814 PAPLEV-PKEKEKEKVSTAVLSITA---KAKKKEKEKEKKEEEKMEVDEAEKKE---EKE 866
P+P E+ +E+EKE+ L + K++EK++E+++E++ E+++ ++K+ EKE
Sbjct: 499 PSPEEIREREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKE 558
Query: 867 KKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVE 926
+K+E E + + + K+ + C L+ E +EE +E
Sbjct: 559 RKQEKEKELERQKEKEKELQ---KMKEQEKECE--------------LEKEREKLEEKIE 601
Query: 927 PVAAH-GPKIEEEEQE 941
P + P +E++E E
Sbjct: 602 PREPNLEPMVEKQESE 617
Score = 37.7 bits (86), Expect = 0.051
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 798 PKVQYKSNCKPSTFAYPAPLEVPKEKEKEK-------VSTAVLSITAKAKKKEKEKEKKE 850
P+ YKS K T P P +E+ ++ + VL + +++ KEKE ++
Sbjct: 981 PEKVYKS--KSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEK 1038
Query: 851 EEKMEVDEAEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGG 910
EK+ K E+ EKK P P P PA ++ ++P + + K S
Sbjct: 1039 AEKVTEKVVVKPEKTEKKDLPPP------PPPPQPPAPIQPQSVPPPIQPEAEKFPSTET 1092
Query: 911 IIILKDTSEDIEELVEPVA 929
+ + S+D E+ +EPV+
Sbjct: 1093 ATLAQKPSQDTEKPLEPVS 1111
Score = 31.2 bits (69), Expect = 4.8
Identities = 17/70 (24%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 813 YPAPLEVPKE----KEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKK 868
+P+ +V E K++ + + + + +A+K+ +E+E++ EE+ + AEK + ++K
Sbjct: 432 FPSKQQVADEDEIWKQRRRQQSEISAAVERARKRREEEERRMEEQRKAACAEKLKRLDEK 491
Query: 869 -----KEPEP 873
K+P P
Sbjct: 492 LGILEKQPSP 501
Score = 30.8 bits (68), Expect = 6.3
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 793 KDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKE-E 851
K+ ++ K Q K E+ ++KEKEK + + + K+ E EKE+++ E
Sbjct: 541 KEKELEKEQEKQREMEKERKQEKEKELERQKEKEK---ELQKMKEQEKECELEKEREKLE 597
Query: 852 EKMEVDE------AEKKE-EKEKKKEPEPNFQLLDN 880
EK+E E EK+E E KE EP F D+
Sbjct: 598 EKIEPREPNLEPMVEKQESENSCNKEEEPVFTRQDS 633
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 40.0 bits (92), Expect = 0.010
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 808 PSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEK 867
P A PAP P+ + E++ A + +++E+E+E+ EEE+ + D+ E ++E E+
Sbjct: 35 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEE 94
Query: 868 K---------KEPE 872
+ KEPE
Sbjct: 95 EASMPNENSVKEPE 108
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 40.0 bits (92), Expect = 0.010
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 808 PSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEK 867
P A PAP P+ + E++ A + +++E+E+E+ EEE+ + D+ E ++E E+
Sbjct: 236 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEE 295
Query: 868 K---------KEPE 872
+ KEPE
Sbjct: 296 EASMPNENSVKEPE 309
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 40.0 bits (92), Expect = 0.010
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 808 PSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEK 867
P A PAP P+ + E++ A + +++E+E+E+ EEE+ + D+ E ++E E+
Sbjct: 236 PPELATPAPAWEPQPEPDERLEAAACEVNDLGEEEEEEEEEDEEEEEDDDDDELEDEGEE 295
Query: 868 K---------KEPE 872
+ KEPE
Sbjct: 296 EASMPNENSVKEPE 309
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 40.0 bits (92), Expect = 0.010
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPE 872
+EKEK K AK KKKE+EKE KE+E+ E E ++KE+ EK++ E
Sbjct: 355 EEKEKLKEEAKRAKEEAK-KKKEEEKELKEKERREKREKDEKEKAEKQRLKE 405
Score = 39.3 bits (90), Expect = 0.018
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKE----KEKKEEEKMEVDEAEKKEEKEKKKE 870
+ +EKEK+ +AKKK++E KEK+ EK E DE EK E++ K+E
Sbjct: 353 EREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRLKEE 406
Score = 35.8 bits (81), Expect = 0.20
Identities = 17/70 (24%), Positives = 39/70 (55%)
Query: 821 KEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDEAEKKEEKEKKKEPEPNFQLLDN 880
+E+ KE+ + K KK+E+++ ++EE++++ ++AE +K K P+ L +
Sbjct: 405 EERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAEITRFFQKPKTPQAPKTLAGS 464
Query: 881 PARVMPAQLK 890
+ P ++K
Sbjct: 465 CGKFAPFEIK 474
Score = 33.1 bits (74), Expect = 1.3
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 791 LNKDLKM-PKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEK- 848
L K LK+ + + K K + KE+EKE K +K++ EK++
Sbjct: 344 LGKQLKLRAEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKERREKREKDEKEKAEKQRL 403
Query: 849 KEEEKMEVDEA-EKKEEKEKKKEPEPNFQLLDNPARVMPAQL-KVLTMPETCRYQPFKPL 906
KEE + E EA E K E+++KKE E + + + A++ + P+T P P
Sbjct: 404 KEERRKERQEALEAKLEEKRKKEEEKRLREEEKRIKAEKAEITRFFQKPKT----PQAPK 459
Query: 907 SIGG 910
++ G
Sbjct: 460 TLAG 463
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,861,884
Number of Sequences: 37866
Number of extensions: 1690799
Number of successful extensions: 29307
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 325
Number of HSP's that attempted gapping in prelim test: 15864
Number of HSP's gapped (non-prelim): 8319
length of query: 953
length of database: 18,247,518
effective HSP length: 112
effective length of query: 841
effective length of database: 14,006,526
effective search space: 11779488366
effective search space used: 11779488366
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.