NUP153 23830

Name: NUP153	Sequence: fasta or formatted (1475aa)		NCBI GI: 24430146
Description: nucleoporin 153kDa		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 99 4 C cysteine 1.9 28 2 D aspartate 2.8 42 3 E glutamate 4.9 72 4 F phenylalanine 6.0 89 1 G glycine 8.6 127 6 H histidine 0.7 11 2 I isoleucine 3.1 45 2 K lysine 6.6 97 2 L leucine 4.7 69 2 M methionine 1.0 15 1 N asparagine 4.6 68 2 P proline 7.9 117 2 Q glutamine 3.9 58 2 R arginine 2.8 41 3 S serine 18.1 267 6 T threonine 9.0 133 3 V valine 5.2 77 2 W tryptophan 0.5 7 1 Y tyrosine 0.9 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin 153kDa RANBP2 0.055 RAN binding protein 2 MUC17 0.038 mucin 17 NUP214 0.035 nucleoporin 214kDa MUC12 0.026 PREDICTED: mucin 12 LOC729792 0.025 PREDICTED: hypothetical protein LOC729792 0.025 PREDICTED: hypothetical protein LOC729792 0.025 PREDICTED: hypothetical protein LOC100294501 0.025 PREDICTED: hypothetical protein LOC100294238 0.025 PREDICTED: hypothetical protein LOC100294204 0.025 PREDICTED: hypothetical protein LOC100294136 0.025 PREDICTED: hypothetical protein LOC100294091 0.025 PREDICTED: hypothetical protein LOC730401 0.025 PREDICTED: hypothetical protein LOC100294249 0.025 PREDICTED: hypothetical protein XP_002344067 LOC100288540 0.023 PREDICTED: hypothetical protein XP_002342775 MUC21 0.023 mucin 21 POM121C 0.022 POM121 membrane glycoprotein (rat)-like MUC12 0.021 PREDICTED: mucin 12, cell surface associated POM121 0.020 nuclear pore membrane protein 121 DSPP 0.020 dentin sialophosphoprotein preproprotein NUP98 0.018 nucleoporin 98kD isoform 3 MUC12 0.018 PREDICTED: mucin 12 NUP62 0.017 nucleoporin 62kDa NUP62 0.017 nucleoporin 62kDa NUP62 0.017 nucleoporin 62kDa NUP62 0.017 nucleoporin 62kDa TRO 0.017 trophinin isoform 5 MUC5AC 0.016 mucin 5AC LOC100130716 0.015 PREDICTED: similar to mucin 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.