Guide to the Human Genome
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Name: PITPNB Sequence: fasta or formatted (271aa) NCBI GI: 6912594
Description:

phosphatidylinositol transfer protein, beta

Referenced in:

Inositol Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         14           2
 C cysteine            1.8          5           1
 D aspartate           5.9         16           2
 E glutamate           9.2         25           1
 F phenylalanine       4.1         11           2
 G glycine             5.5         15           3
 H histidine           2.6          7           1
 I isoleucine          5.9         16           1
 K lysine             10.0         27           2
 L leucine             6.3         17           1
 M methionine          2.6          7           1
 N asparagine          3.7         10           1
 P proline             4.8         13           1
 Q glutamine           4.4         12           1
 R arginine            4.4         12           2
 S serine              4.1         11           1
 T threonine           5.5         15           1
 V valine              7.4         20           2
 W tryptophan          3.0          8           2
 Y tyrosine            3.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatidylinositol transfer protein, beta 
PITPNA                0.810   phosphatidylinositol transfer protein, alpha 
PITPNM1               0.366   phosphatidylinositol transfer protein, membrane-ass...
PITPNM1               0.366   phosphatidylinositol transfer protein, membrane-ass...
PITPNM2               0.365   phosphatidylinositol transfer protein, membrane-asso...
PITPNC1               0.293   phosphatidylinositol transfer protein, cytoplasmic 1...
PITPNC1               0.291   phosphatidylinositol transfer protein, cytoplasmic 1...
TFAM                  0.011   transcription factor A, mitochondrial 
SIN3A                 0.009   transcriptional co-repressor Sin3A 
SIN3A                 0.009   transcriptional co-repressor Sin3A 
SIN3A                 0.009   transcriptional co-repressor Sin3A 
MAP4K4                0.009   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.009   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.009   mitogen-activated protein kinase kinase kinase kinas...
BBOX1                 0.007   gamma-butyrobetaine dioxygenase 
UBTFL3                0.007   PREDICTED: upstream binding transcription factor, R...
UBTFL5                0.007   PREDICTED: upstream binding transcription factor, R...
AKAP9                 0.006   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.006   A-kinase anchor protein 9 isoform 3 
UBTFL6                0.006   PREDICTED: upstream binding transcription factor, R...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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