Guide to the Human Genome
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Name: KIAA0776 Sequence: fasta or formatted (794aa) NCBI GI: 24308039
Description:

hypothetical protein LOC23376

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         52           2
 C cysteine            1.0          8           1
 D aspartate           6.4         51           3
 E glutamate           8.2         65           2
 F phenylalanine       3.9         31           2
 G glycine             4.8         38           5
 H histidine           2.1         17           1
 I isoleucine          6.7         53           2
 K lysine              8.2         65           3
 L leucine            10.6         84           2
 M methionine          1.6         13           2
 N asparagine          3.4         27           2
 P proline             2.1         17           1
 Q glutamine           5.7         45           2
 R arginine            5.7         45           3
 S serine              8.2         65           3
 T threonine           5.5         44           2
 V valine              7.1         56           3
 W tryptophan          0.4          3           1
 Y tyrosine            1.9         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23376 
RNF20                 0.013   ring finger protein 20 
CCAR1                 0.010   cell-cycle and apoptosis regulatory protein 1 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform III 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform II 
ARID4A                0.009   retinoblastoma-binding protein 1 isoform I 
CYLC1                 0.009   cylicin, basic protein of sperm head cytoskeleton 1...
SMARCA4               0.008   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.008   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.008   SWI/SNF-related matrix-associated actin-dependent re...
RFC1                  0.008   replication factor C large subunit 
MYH15                 0.008   myosin, heavy polypeptide 15 
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
HDGF2                 0.007   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.007   hepatoma-derived growth factor-related protein 2 iso...
SMARCA4               0.007   SWI/SNF-related matrix-associated actin-dependent r...
MCM3                  0.007   minichromosome maintenance complex component 3 
ATRX                  0.007   transcriptional regulator ATRX isoform 2 
ATRX                  0.007   transcriptional regulator ATRX isoform 1 
LYAR                  0.007   Ly1 antibody reactive homolog 
LYAR                  0.007   Ly1 antibody reactive homolog 
TRDN                  0.007   triadin 
NSBP1                 0.007   nucleosomal binding protein 1 
PCDHA4                0.007   protocadherin alpha 4 isoform 2 precursor 
PCDHA4                0.007   protocadherin alpha 4 isoform 1 precursor 
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform f...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.006   Treacher Collins-Franceschetti syndrome 1 isoform d...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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