BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239757786 PREDICTED: hypothetical protein [Homo sapiens] (82 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239757786 PREDICTED: hypothetical protein [Homo sapiens] 172 4e-44 gi|32479521 dishevelled 1 [Homo sapiens] 33 0.049 gi|239745779 PREDICTED: hypothetical protein XP_002343588 [Homo ... 33 0.049 gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] 32 0.083 gi|145275213 coagulation factor XII precursor [Homo sapiens] 32 0.11 gi|150010546 G antigen 10 [Homo sapiens] 32 0.11 gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens] 31 0.24 gi|217330589 transforming growth factor, beta receptor associate... 30 0.41 gi|21359865 transforming growth factor, beta receptor associated... 30 0.41 gi|11415052 retinoid X receptor, beta [Homo sapiens] 29 0.71 gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens] 29 0.71 gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens] 29 0.71 gi|50726960 phosphatidylinositol (4,5) bisphosphate 5-phosphatas... 29 0.71 gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 29 0.92 gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 29 0.92 gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] 29 0.92 gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo s... 29 0.92 gi|21687252 zinc finger protein 296 [Homo sapiens] 29 0.92 gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo s... 29 0.92 gi|33946327 nucleoporin 214kDa [Homo sapiens] 28 1.2 gi|20149646 hypothetical protein LOC54964 [Homo sapiens] 28 1.2 gi|118344450 cell death inducing protein [Homo sapiens] 28 1.6 gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 28 1.6 gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 28 2.1 gi|23510333 pygopus homolog 2 [Homo sapiens] 28 2.1 gi|239752937 PREDICTED: hypothetical protein [Homo sapiens] 27 2.7 gi|239747481 PREDICTED: hypothetical protein XP_002347535 [Homo ... 27 2.7 gi|239741353 PREDICTED: hypothetical protein XP_002342204 [Homo ... 27 2.7 gi|24497506 forkhead box A3 [Homo sapiens] 27 2.7 gi|223278393 protein phosphatase 1, regulatory (inhibitor) subun... 27 3.5 >gi|239757786 PREDICTED: hypothetical protein [Homo sapiens] Length = 82 Score = 172 bits (437), Expect = 4e-44 Identities = 82/82 (100%), Positives = 82/82 (100%) Query: 1 MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60 MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP Sbjct: 1 MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60 Query: 61 SKNASLGEGPYLTPSFWPPPLP 82 SKNASLGEGPYLTPSFWPPPLP Sbjct: 61 SKNASLGEGPYLTPSFWPPPLP 82 >gi|32479521 dishevelled 1 [Homo sapiens] Length = 670 Score = 33.1 bits (74), Expect = 0.049 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 12 SPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPY 71 S SG + ++ PG RR GAG S S H GSS R P+ S G P Sbjct: 548 SKSSGSTRSSRRAPGREKERRAAGAG-GSGSESDHTAPSGVGSSWRERPAGQLSRGSSPR 606 Query: 72 LTPSFWPPPLP 82 S P LP Sbjct: 607 SQASATAPGLP 617 >gi|239745779 PREDICTED: hypothetical protein XP_002343588 [Homo sapiens] Length = 201 Score = 33.1 bits (74), Expect = 0.049 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Query: 13 PESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSK-RIPPSKNASLGEGPY 71 P G A +G + + SR GR GS NS HG+ +SK RIP ASL Sbjct: 140 PGPGSAPSGWETWADLGSRAGRSQGSGLNSSTAHGRAESKTQGHVRIPRPVTASLTPDVT 199 Query: 72 LT 73 LT Sbjct: 200 LT 201 >gi|170016091 odz, odd Oz/ten-m homolog 2 [Homo sapiens] Length = 2765 Score = 32.3 bits (72), Expect = 0.083 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Query: 11 LSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVIT----HGKRKSKGSSKR-IPPSKNAS 65 +SPE + G+ I SRR G S NS +T + KS + R IPP+ + S Sbjct: 123 MSPEHAIRLWGRG----IKSRRSSGLSSRENSALTLTDSDNENKSDDENGRPIPPTSSPS 178 Query: 66 LGEGPYLTPSFWPPPL 81 L L S PPP+ Sbjct: 179 LLPSAQLPSSHNPPPV 194 >gi|145275213 coagulation factor XII precursor [Homo sapiens] Length = 615 Score = 32.0 bits (71), Expect = 0.11 Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 5/82 (6%) Query: 1 MHVPWLQSEPLSPESGVAAAG---KQEPGFIISRRGRGAGSSSNSVITHGKR--KSKGSS 55 +HVP + ++P P+ Q PG + ++R + + N ++ G+R KS S Sbjct: 311 LHVPLMPAQPAPPKPQPTTRTPPQSQTPGALPAKREQPPSLTRNGPLSCGQRLRKSLSSM 370 Query: 56 KRIPPSKNASLGEGPYLTPSFW 77 R+ A G PY+ +W Sbjct: 371 TRVVGGLVALRGAHPYIAALYW 392 >gi|150010546 G antigen 10 [Homo sapiens] Length = 116 Score = 32.0 bits (71), Expect = 0.11 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 9 EPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGE 68 EP +PE G A +Q+P ++ G G+S+ G + S +++ P G+ Sbjct: 36 EPATPEEGEPATQRQDPA--AAQEGEDEGASAG----QGPKPEADSQEQVHPKTGCECGD 89 Query: 69 GP 70 GP Sbjct: 90 GP 91 >gi|22547159 tetratricopeptide repeat domain 19 [Homo sapiens] Length = 501 Score = 30.8 bits (68), Expect = 0.24 Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 21/86 (24%) Query: 10 PLSPESGVAAAGKQEPGFIISRRGRGAG-------SSSNSVITHGKRKSKGSSKR----- 57 P +PE G QE + RRGRG S + R+ +G S R Sbjct: 94 PANPEGARRVVGGQERVWPAVRRGRGGSMFRLLSWSLGRGFLRAAGRRCRGCSARLLPGL 153 Query: 58 ---------IPPSKNASLGEGPYLTP 74 +PPS+ A G GP L P Sbjct: 154 AGGPGPEVQVPPSRVAPHGRGPGLLP 179 >gi|217330589 transforming growth factor, beta receptor associated protein 1 [Homo sapiens] Length = 860 Score = 30.0 bits (66), Expect = 0.41 Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 35 GAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPYLTPSF 76 G S N + T+ K K KGSS ++ K + + P+ P F Sbjct: 789 GLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVF 830 >gi|21359865 transforming growth factor, beta receptor associated protein 1 [Homo sapiens] Length = 860 Score = 30.0 bits (66), Expect = 0.41 Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 35 GAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEGPYLTPSF 76 G S N + T+ K K KGSS ++ K + + P+ P F Sbjct: 789 GLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVF 830 >gi|11415052 retinoid X receptor, beta [Homo sapiens] Length = 533 Score = 29.3 bits (64), Expect = 0.71 Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 15/91 (16%) Query: 4 PWLQSEPLSPESGVAAAGKQ-----EPGFI-------ISRRGRGAGSSSNSVITHGKRKS 51 PWL +P + + A G+Q EPG R R SSS + + G Sbjct: 41 PWL--DPAAAAAAAVAGGEQQTPEPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGVPPP 98 Query: 52 KGSSKRIPPSKNASL-GEGPYLTPSFWPPPL 81 +PPS SL G G P PPPL Sbjct: 99 SPPGPPLPPSTAPSLGGSGAPPPPPMPPPPL 129 >gi|62177112 katanin p60 subunit A-like 1 [Homo sapiens] Length = 490 Score = 29.3 bits (64), Expect = 0.71 Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 59 PPSKNASLGEGPYLTPSFWPPPLP 82 PP S + P+ P+ WPPP+P Sbjct: 81 PPDFPVSCQDEPFRDPAVWPPPVP 104 >gi|14149767 katanin p60 subunit A-like 1 [Homo sapiens] Length = 490 Score = 29.3 bits (64), Expect = 0.71 Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 59 PPSKNASLGEGPYLTPSFWPPPLP 82 PP S + P+ P+ WPPP+P Sbjct: 81 PPDFPVSCQDEPFRDPAVWPPPVP 104 >gi|50726960 phosphatidylinositol (4,5) bisphosphate 5-phosphatase, A [Homo sapiens] Length = 638 Score = 29.3 bits (64), Expect = 0.71 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%) Query: 16 GVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLGEG-PYLTP 74 G ++ G + PG +R G G+ V G SS ++P KNA+LG P +T Sbjct: 3 GQSSRGSRRPG---TRAGLGSLPMPQGVAQTGAPSKVDSSFQLPAKKNAALGPSEPRITV 59 Query: 75 SFW 77 W Sbjct: 60 VTW 62 >gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2790 Score = 28.9 bits (63), Expect = 0.92 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Query: 10 PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63 P +P S A +Q PG SR+G G + T K G +P S Sbjct: 1244 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1299 Query: 64 ASLG--EGPYLTPSFWPPPLP 82 L EGP LTP P PLP Sbjct: 1300 FLLSPLEGPNLTPEASPDPLP 1320 >gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 28.9 bits (63), Expect = 0.92 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Query: 10 PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63 P +P S A +Q PG SR+G G + T K G +P S Sbjct: 1160 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1215 Query: 64 ASLG--EGPYLTPSFWPPPLP 82 L EGP LTP P PLP Sbjct: 1216 FLLSPLEGPNLTPEASPDPLP 1236 >gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens] Length = 2706 Score = 28.9 bits (63), Expect = 0.92 Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 12/81 (14%) Query: 10 PLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSS------KRIPPSKN 63 P +P S A +Q PG SR+G G + T K G +P S Sbjct: 1160 PRTPHSWARAYTEQRPG---SRKGDSMGQQGLKM-TEAKVNCLGIEWVGSGLNEVPSSLY 1215 Query: 64 ASLG--EGPYLTPSFWPPPLP 82 L EGP LTP P PLP Sbjct: 1216 FLLSPLEGPNLTPEASPDPLP 1236 >gi|38016904 thrombospondin repeat containing 1 isoform 1 [Homo sapiens] Length = 1074 Score = 28.9 bits (63), Expect = 0.92 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 17/78 (21%) Query: 1 MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60 +H P Q+EPLSPE+ ++ R R A + H + ++ G+ PP Sbjct: 221 VHTPSPQAEPLSPETAQTE---------VAPRTRPA-----PLRHHPRAQASGTE---PP 263 Query: 61 SKNASLGEGPYLTPSFWP 78 S SLGEG + S P Sbjct: 264 SPTHSLGEGGFFRASPQP 281 >gi|21687252 zinc finger protein 296 [Homo sapiens] Length = 475 Score = 28.9 bits (63), Expect = 0.92 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 5/57 (8%) Query: 18 AAAGKQEPGFIISRRGRGAGSSSNSVITHGKR-----KSKGSSKRIPPSKNASLGEG 69 A AG QEPG S G G + IT +R K S K++P S S G G Sbjct: 329 ATAGVQEPGAPGSGAQAGPGGDTWGAITTEQRTDPANSQKASPKKMPKSGGKSRGPG 385 >gi|56788359 thrombospondin repeat containing 1 isoform 2 [Homo sapiens] Length = 877 Score = 28.9 bits (63), Expect = 0.92 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 17/78 (21%) Query: 1 MHVPWLQSEPLSPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60 +H P Q+EPLSPE+ ++ R R A + H + ++ G+ PP Sbjct: 221 VHTPSPQAEPLSPETAQTE---------VAPRTRPA-----PLRHHPRAQASGTE---PP 263 Query: 61 SKNASLGEGPYLTPSFWP 78 S SLGEG + S P Sbjct: 264 SPTHSLGEGGFFRASPQP 281 >gi|33946327 nucleoporin 214kDa [Homo sapiens] Length = 2090 Score = 28.5 bits (62), Expect = 1.2 Identities = 22/56 (39%), Positives = 24/56 (42%), Gaps = 8/56 (14%) Query: 12 SPESGVAAAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSK-RIPPSKNASL 66 SP SG+ +A P G A SSS V G S SSK PPSK L Sbjct: 1272 SPPSGITSASNTTP-------GEPAASSSRPVAPSGTALSTTSSKLETPPSKLGEL 1320 >gi|20149646 hypothetical protein LOC54964 [Homo sapiens] Length = 341 Score = 28.5 bits (62), Expect = 1.2 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 14/91 (15%) Query: 6 LQSEPLSPESGVAA-AGKQEPGFII-SRRGRGAGSSSNSVITHGKR----------KSKG 53 + E S E GV AGK + S AGSSS I + + +S G Sbjct: 100 INEEDGSSEEGVVINAGKDSTSRELPSATPNTAGSSSTRFIANSQEPEIRLTSSLPRSPG 159 Query: 54 SSKRIPPSKNASLGEG--PYLTPSFWPPPLP 82 S P A+L + P TPS WP P P Sbjct: 160 RSTEDLPGSQATLSQWSTPGSTPSRWPSPSP 190 >gi|118344450 cell death inducing protein [Homo sapiens] Length = 208 Score = 28.1 bits (61), Expect = 1.6 Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%) Query: 58 IPPSKNASLGEGPYLTPSFWPPPLP 82 IPP +A +G Y+ P F+PPP P Sbjct: 67 IPPHMSA---DGTYMPPGFYPPPGP 88 >gi|126723390 ankyrin repeat domain 24 [Homo sapiens] Length = 1146 Score = 28.1 bits (61), Expect = 1.6 Identities = 14/42 (33%), Positives = 21/42 (50%) Query: 19 AAGKQEPGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPP 60 AA + P ++ G SS NS+ +HGK+ + K PP Sbjct: 269 AAQRPSPPSALTEDDSGEASSQNSMSSHGKQGAPKKRKAPPP 310 >gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] Length = 819 Score = 27.7 bits (60), Expect = 2.1 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 15 SGVAAAGKQEPGFIISRRGRGAGSSSNS---VITHGKRKSKGSSKRIPPSKNASLGEG 69 SG AA + G ++R RG G+ S S +T G +K+ + + PP + G G Sbjct: 749 SGKKAAASKSHGGGGAKRRRGGGAKSRSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRG 806 >gi|23510333 pygopus homolog 2 [Homo sapiens] Length = 406 Score = 27.7 bits (60), Expect = 2.1 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 4/54 (7%) Query: 10 PLSPESG--VAAAGKQEPGFIISRRGRGAGS-SSNSVITHGKRKSKGSSKRIPP 60 P P SG AA +P F + GRG G+ +NS+ GK GS + PP Sbjct: 272 PQEPHSGSPAAAVNGNQPSFPPNSSGRGGGTPDANSLAPPGK-AGGGSGPQPPP 324 >gi|239752937 PREDICTED: hypothetical protein [Homo sapiens] Length = 101 Score = 27.3 bits (59), Expect = 2.7 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67 GV+ AG+ P SR+GRGA ++ G R+ GS R+ P + LG Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74 >gi|239747481 PREDICTED: hypothetical protein XP_002347535 [Homo sapiens] Length = 101 Score = 27.3 bits (59), Expect = 2.7 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67 GV+ AG+ P SR+GRGA ++ G R+ GS R+ P + LG Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74 >gi|239741353 PREDICTED: hypothetical protein XP_002342204 [Homo sapiens] Length = 101 Score = 27.3 bits (59), Expect = 2.7 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%) Query: 16 GVAAAGKQE--PGFIISRRGRGAGSSSNSVITHGKRKSKGSSKRIPPSKNASLG 67 GV+ AG+ P SR+GRGA ++ G R+ GS R+ P + LG Sbjct: 23 GVSMAGRLAALPAGQGSRKGRGARVEGQRLLGVGVRRPAGS--RLAPGRRGDLG 74 >gi|24497506 forkhead box A3 [Homo sapiens] Length = 350 Score = 27.3 bits (59), Expect = 2.7 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 6 LQSEPLSPESGVAAAGKQEPGFIISRRGRGAG-SSSNSVITHGKRKSKGSSKRIPPSK 62 L S PL+P + A G PG +S +G + + HGK KG + + +K Sbjct: 60 LPSGPLAPPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAK 117 >gi|223278393 protein phosphatase 1, regulatory (inhibitor) subunit 3G [Homo sapiens] Length = 358 Score = 26.9 bits (58), Expect = 3.5 Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 6 LQSEPLSPESGVAAAGKQEPGFIISRRGRGA 36 LQ EPL P+ A +G EPG +++ GA Sbjct: 267 LQPEPLEPQQPEAPSGASEPGSGDAKKEPGA 297 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.309 0.130 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,308,978 Number of Sequences: 37866 Number of extensions: 193137 Number of successful extensions: 686 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 653 Number of HSP's gapped (non-prelim): 80 length of query: 82 length of database: 18,247,518 effective HSP length: 54 effective length of query: 28 effective length of database: 16,202,754 effective search space: 453677112 effective search space used: 453677112 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.