Guide to the Human Genome
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Name: LOC100128332 Sequence: fasta or formatted (82aa) NCBI GI: 239757786
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1          5           3
 C cysteine            0.0          0           0
 D aspartate           0.0          0           0
 E glutamate           4.9          4           1
 F phenylalanine       2.4          2           1
 G glycine            12.2         10           1
 H histidine           2.4          2           1
 I isoleucine          4.9          4           2
 K lysine              7.3          6           1
 L leucine             6.1          5           1
 M methionine          1.2          1           1
 N asparagine          2.4          2           1
 P proline            14.6         12           3
 Q glutamine           2.4          2           1
 R arginine            6.1          5           2
 S serine             17.1         14           3
 T threonine           2.4          2           1
 V valine              3.7          3           1
 W tryptophan          2.4          2           1
 Y tyrosine            1.2          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
DVL1                  0.054   dishevelled 1 
LOC100287420          0.054   PREDICTED: hypothetical protein XP_002343588 
ODZ2                  0.048   odz, odd Oz/ten-m homolog 2 
F12                   0.048   coagulation factor XII precursor 
GAGE10                0.048   G antigen 10 
TTC19                 0.041   tetratricopeptide repeat domain 19 
TGFBRAP1              0.034   transforming growth factor, beta receptor associate...
TGFBRAP1              0.034   transforming growth factor, beta receptor associated...
RXRB                  0.027   retinoid X receptor, beta 
KATNAL1               0.027   katanin p60 subunit A-like 1 
KATNAL1               0.027   katanin p60 subunit A-like 1 
INPP5J                0.027   phosphatidylinositol (4,5) bisphosphate 5-phosphatas...
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.027   PREDICTED: zinc finger homeobox 2 
ADAMTSL4              0.027   thrombospondin repeat containing 1 isoform 1 
ZNF296                0.027   zinc finger protein 296 
ADAMTSL4              0.027   thrombospondin repeat containing 1 isoform 2 
NUP214                0.020   nucleoporin 214kDa 
C1orf56               0.020   hypothetical protein LOC54964 
C16orf5               0.020   cell death inducing protein 
ANKRD24               0.020   ankyrin repeat domain 24 
LOC100292370          0.020   PREDICTED: hypothetical protein 
PYGO2                 0.020   pygopus homolog 2 
LOC100292970          0.014   PREDICTED: hypothetical protein 
LOC100290628          0.014   PREDICTED: hypothetical protein XP_002347535 
LOC100287276          0.014   PREDICTED: hypothetical protein XP_002342204 
FOXA3                 0.014   forkhead box A3 
PPP1R3G               0.014   protein phosphatase 1, regulatory (inhibitor) subun...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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