KATNAL1 3731

Name: KATNAL1	Sequence: fasta or formatted (490aa)		NCBI GI: 14149767
Description: katanin p60 subunit A-like 1		Referenced in: Cytoskeleton
Other entries for this name: alt mRNA [490aa] katanin p60 subunit A-like 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 39 2 C cysteine 1.2 6 1 D aspartate 7.3 36 2 E glutamate 8.8 43 2 F phenylalanine 2.9 14 2 G glycine 6.3 31 2 H histidine 1.0 5 1 I isoleucine 5.5 27 1 K lysine 7.3 36 2 L leucine 7.8 38 2 M methionine 3.7 18 1 N asparagine 2.4 12 1 P proline 6.5 32 3 Q glutamine 3.1 15 2 R arginine 8.4 41 3 S serine 6.5 32 3 T threonine 3.3 16 2 V valine 6.1 30 2 W tryptophan 1.4 7 1 Y tyrosine 2.4 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 katanin p60 subunit A-like 1 KATNAL1 1.000 katanin p60 subunit A-like 1 KATNA1 0.639 katanin p60 subunit A 1 KATNAL2 0.253 katanin p60 subunit A-like 2 FIGNL1 0.239 fidgetin-like 1 FIGNL1 0.239 fidgetin-like 1 VPS4A 0.237 vacuolar protein sorting factor 4A VPS4B 0.230 vacuolar protein sorting factor 4B SPAST 0.224 spastin isoform 2 SPAST 0.224 spastin isoform 1 ATAD1 0.174 ATPase family, AAA domain containing 1 VCP 0.171 valosin-containing protein FIGN 0.161 fidgetin SPATA5 0.154 spermatogenesis associated 5 NVL 0.151 nuclear VCP-like isoform 2 NVL 0.151 nuclear VCP-like isoform 1 SPATA5L1 0.149 spermatogenesis associated 5-like 1 PSMC5 0.148 proteasome 26S ATPase subunit 5 ATAD2 0.141 ATPase family, AAA domain containing 2 PSMC6 0.140 proteasome 26S ATPase subunit 6 PSMC3 0.136 proteasome 26S ATPase subunit 3 PSMC1 0.136 proteasome 26S ATPase subunit 1 PEX6 0.135 peroxisomal biogenesis factor 6 PSMC2 0.131 proteasome 26S ATPase subunit 2 YME1L1 0.125 YME1-like 1 isoform 1 YME1L1 0.125 YME1-like 1 isoform 3 LOC652826 0.123 PREDICTED: similar to proteasome 26S ATPase subunit ... PSMC4 0.123 proteasome 26S ATPase subunit 4 isoform 2 PSMC4 0.123 proteasome 26S ATPase subunit 4 isoform 1 ATAD2B 0.121 ATPase family, AAA domain containing 2B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.