LOC100291807 23298

Name: LOC100291807	Sequence: fasta or formatted (609aa)		NCBI GI: 239757626
Description: PREDICTED: hypothetical protein XP_002345507		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.2 62 3 C cysteine 2.0 12 1 D aspartate 4.6 28 2 E glutamate 3.8 23 2 F phenylalanine 1.5 9 2 G glycine 15.1 92 5 H histidine 4.1 25 2 I isoleucine 1.3 8 2 K lysine 1.1 7 1 L leucine 8.5 52 2 M methionine 0.8 5 1 N asparagine 0.7 4 1 P proline 11.8 72 2 Q glutamine 6.6 40 2 R arginine 10.7 65 3 S serine 5.1 31 2 T threonine 5.4 33 2 V valine 4.6 28 2 W tryptophan 1.3 8 2 Y tyrosine 0.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002345507 LOC100288309 0.223 PREDICTED: hypothetical protein XP_002344234 COL2A1 0.033 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.033 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL3A1 0.033 collagen type III alpha 1 preproprotein COL10A1 0.033 type X collagen alpha 1 precursor COL4A3 0.032 alpha 3 type IV collagen isoform 5 precursor COL4A3 0.032 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.032 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.032 alpha 3 type IV collagen isoform 1 precursor COL7A1 0.031 alpha 1 type VII collagen precursor COL1A1 0.029 alpha 1 type I collagen preproprotein COL22A1 0.028 collagen, type XXII, alpha 1 ZNF469 0.027 zinc finger protein 469 COL18A1 0.026 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.026 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.026 alpha 1 type XVIII collagen isoform 1 precursor [Ho... LOC100293055 0.025 PREDICTED: similar to COL22A1 protein COL19A1 0.025 alpha 1 type XIX collagen precursor BAT2 0.025 HLA-B associated transcript-2 NACA 0.025 nascent polypeptide-associated complex alpha subuni... COL5A2 0.023 alpha 2 type V collagen preproprotein COL8A2 0.023 collagen, type VIII, alpha 2 COL4A1 0.022 alpha 1 type IV collagen preproprotein COL11A1 0.021 alpha 1 type XI collagen isoform B preproprotein [Ho... COL11A1 0.021 alpha 1 type XI collagen isoform C preproprotein [Ho... COL11A1 0.021 alpha 1 type XI collagen isoform A preproprotein [Ho... PRB2 0.021 proline-rich protein BstNI subfamily 2 SHANK1 0.021 SH3 and multiple ankyrin repeat domains 1 COL4A5 0.021 type IV collagen alpha 5 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.