Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RECK Sequence: fasta or formatted (971aa) NCBI GI: 11863156
Description:

RECK protein precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         59           2
 C cysteine            9.2         89           2
 D aspartate           4.6         45           2
 E glutamate           5.6         54           2
 F phenylalanine       2.6         25           1
 G glycine             5.8         56           2
 H histidine           2.6         25           2
 I isoleucine          4.9         48           2
 K lysine              5.5         53           2
 L leucine             8.5         83           5
 M methionine          2.1         20           1
 N asparagine          4.6         45           2
 P proline             6.4         62           3
 Q glutamine           4.7         46           1
 R arginine            3.9         38           2
 S serine              9.4         91           3
 T threonine           4.1         40           2
 V valine              6.1         59           1
 W tryptophan          0.8          8           1
 Y tyrosine            2.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RECK protein precursor 
KCP                   0.024   cysteine rich BMP regulator 2 isoform 2 
KCP                   0.019   cysteine rich BMP regulator 2 isoform 1 
AGRN                  0.019   agrin 
KRTAP10-6             0.015   keratin associated protein 10-6 
CRIM1                 0.013   cysteine-rich motor neuron 1 
KRTAP10-11            0.013   keratin associated protein 10-11 
VWF                   0.012   von Willebrand factor preproprotein 
KRTAP10-4             0.012   keratin associated protein 10-4 
KRTAP10-10            0.012   keratin associated protein 10-10 
JAG2                  0.011   jagged 2 isoform b precursor 
JAG2                  0.011   jagged 2 isoform a precursor 
JAG1                  0.011   jagged 1 precursor 
LOC100291118          0.010   PREDICTED: hypothetical protein XP_002347351 
LOC100287737          0.010   PREDICTED: hypothetical protein XP_002343203 
TNC                   0.010   tenascin C precursor 
STAB1                 0.009   stabilin 1 precursor 
KRTAP10-7             0.009   keratin associated protein 10-7 
KRTAP10-8             0.009   keratin associated protein 10-8 
FRAS1                 0.009   Fraser syndrome 1 
NOTCH1                0.009   notch1 preproprotein 
MUC5AC                0.008   mucin 5AC 
LOC100132635          0.008   PREDICTED: similar to mucin 5, partial 
KRTAP10-5             0.008   keratin associated protein 10-5 
SSPO                  0.008   SCO-spondin 
KRTAP10-1             0.008   keratin associated protein 10-1 
VWCE                  0.008   von Willebrand factor C and EGF domains 
LRP2                  0.008   low density lipoprotein-related protein 2 
LRP1B                 0.007   low density lipoprotein-related protein 1B precursor...
TMEFF1                0.007   transmembrane protein with EGF-like and two follista...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press