Guide to the Human Genome
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Name: KRTAP10-5 Sequence: fasta or formatted (271aa) NCBI GI: 63053517
Description:

keratin associated protein 10-5

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         19           2
 C cysteine           26.9         73           2
 D aspartate           1.8          5           2
 E glutamate           1.5          4           1
 F phenylalanine       0.4          1           1
 G glycine             1.1          3           1
 H histidine           0.4          1           1
 I isoleucine          1.1          3           1
 K lysine              1.8          5           1
 L leucine             3.0          8           2
 M methionine          0.7          2           1
 N asparagine          0.0          0           0
 P proline            11.8         32           2
 Q glutamine           6.6         18           2
 R arginine            2.6          7           1
 S serine             19.6         53           3
 T threonine           5.2         14           2
 V valine              7.4         20           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.7          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-5 
KRTAP10-1             0.883   keratin associated protein 10-1 
KRTAP10-9             0.811   keratin associated protein 10-9 
KRTAP10-11            0.801   keratin associated protein 10-11 
KRTAP10-7             0.746   keratin associated protein 10-7 
KRTAP10-2             0.722   keratin associated protein 10-2 
KRTAP10-6             0.705   keratin associated protein 10-6 
KRTAP10-4             0.669   keratin associated protein 10-4 
KRTAP10-10            0.544   keratin associated protein 10-10 
KRTAP10-8             0.544   keratin associated protein 10-8 
KRTAP10-12            0.527   keratin associated protein 10-12 
KRTAP10-3             0.427   keratin associated protein 10-3 
LOC100130599          0.420   PREDICTED: hypothetical protein 
LOC100130599          0.414   PREDICTED: similar to Keratin-associated protein 10...
LOC100131696          0.318   PREDICTED: keratin associated protein 
LOC100288060          0.318   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.318   PREDICTED: keratin associated protein 
KRTAP4-9              0.313   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-9              0.311   keratin associated protein 4-9 
KRTAP4-12             0.305   keratin associated protein 4-12 
KRTAP4-8              0.305   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.305   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-3              0.303   keratin associated protein 4-3 
KRTAP4-11             0.292   keratin associated protein 4-11 
KRTAP4-9              0.288   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-8              0.283   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.283   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.278   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.262   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.262   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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