Guide to the Human Genome
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Name: KRTAP10-11 Sequence: fasta or formatted (298aa) NCBI GI: 154759249
Description:

keratin associated protein 10-11

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         24           2
 C cysteine           25.8         77           2
 D aspartate           1.3          4           2
 E glutamate           1.3          4           1
 F phenylalanine       0.0          0           0
 G glycine             1.0          3           1
 H histidine           0.3          1           1
 I isoleucine          0.3          1           1
 K lysine              2.3          7           2
 L leucine             2.7          8           2
 M methionine          0.7          2           1
 N asparagine          0.0          0           0
 P proline            10.4         31           2
 Q glutamine           6.7         20           2
 R arginine            2.7          8           1
 S serine             21.8         65           3
 T threonine           4.4         13           2
 V valine              8.4         25           1
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 10-11 
KRTAP10-9             0.808   keratin associated protein 10-9 
KRTAP10-1             0.785   keratin associated protein 10-1 
KRTAP10-5             0.740   keratin associated protein 10-5 
KRTAP10-6             0.728   keratin associated protein 10-6 
KRTAP10-7             0.723   keratin associated protein 10-7 
KRTAP10-2             0.688   keratin associated protein 10-2 
KRTAP10-4             0.656   keratin associated protein 10-4 
KRTAP10-12            0.531   keratin associated protein 10-12 
KRTAP10-10            0.521   keratin associated protein 10-10 
KRTAP10-8             0.490   keratin associated protein 10-8 
KRTAP10-3             0.478   keratin associated protein 10-3 
LOC100130599          0.406   PREDICTED: hypothetical protein 
LOC100130599          0.403   PREDICTED: similar to Keratin-associated protein 10...
KRTAP4-8              0.300   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.300   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.300   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-12             0.298   keratin associated protein 4-12 
KRTAP4-9              0.297   keratin associated protein 4-9 
LOC100131696          0.297   PREDICTED: keratin associated protein 
LOC100288060          0.297   PREDICTED: hypothetical protein XP_002343557 
LOC100131696          0.295   PREDICTED: keratin associated protein 
KRTAP4-3              0.275   keratin associated protein 4-3 
KRTAP4-8              0.269   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.269   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-9              0.266   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-11             0.265   keratin associated protein 4-11 
KRTAP4-8              0.260   PREDICTED: keratin associated protein 4-8 
KRTAP4-8              0.254   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.254   PREDICTED: similar to keratin associated protein 4-...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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