Guide to the Human Genome
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Name: LOC100294441 Sequence: fasta or formatted (81aa) NCBI GI: 239752527
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5          2           1
 C cysteine            4.9          4           1
 D aspartate           0.0          0           0
 E glutamate           0.0          0           0
 F phenylalanine       1.2          1           1
 G glycine             0.0          0           0
 H histidine          16.0         13           2
 I isoleucine         25.9         21           1
 K lysine              0.0          0           0
 L leucine             0.0          0           0
 M methionine          7.4          6           1
 N asparagine          1.2          1           1
 P proline             0.0          0           0
 Q glutamine           0.0          0           0
 R arginine            0.0          0           0
 S serine              1.2          1           1
 T threonine           8.6          7           1
 V valine              3.7          3           1
 W tryptophan          0.0          0           0
 Y tyrosine           27.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100291872          0.902   PREDICTED: hypothetical protein XP_002345798 
LOC100132983          0.543   PREDICTED: hypothetical protein 
LOC100288317          0.500   PREDICTED: hypothetical protein XP_002342505 
LOC100291272          0.488   PREDICTED: hypothetical protein XP_002348172 
LOC100287989          0.488   PREDICTED: hypothetical protein XP_002343908 
LOC100128473          0.488   PREDICTED: hypothetical protein 
LOC100132107          0.482   PREDICTED: hypothetical protein 
LOC100134332          0.482   PREDICTED: hypothetical protein, partial 
LOC100132107          0.482   PREDICTED: hypothetical protein 
LOC100133807          0.476   PREDICTED: similar to serine/threonine-protein kina...
LOC100293402          0.476   PREDICTED: hypothetical protein 
LOC100129642          0.476   PREDICTED: hypothetical protein 
LOC100132782          0.470   PREDICTED: hypothetical protein 
LOC100134060          0.470   PREDICTED: hypothetical protein 
LOC100131203          0.463   PREDICTED: hypothetical protein 
LOC100289649          0.457   PREDICTED: hypothetical protein XP_002342367 
LOC100131488          0.457   PREDICTED: hypothetical protein 
LOC100134411          0.457   PREDICTED: hypothetical protein 
LOC100131203          0.457   PREDICTED: similar to serine/threonine-protein kina...
LOC100131203          0.457   PREDICTED: similar to serine/threonine-protein kina...
LOC100288070          0.451   PREDICTED: hypothetical protein XP_002342194 
LOC100132316          0.451   PREDICTED: hypothetical protein 
LOC100134730          0.451   PREDICTED: hypothetical protein 
LOC100291751          0.445   PREDICTED: hypothetical protein XP_002345809, parti...
LOC100132016          0.445   PREDICTED: hypothetical protein 
LOC100133515          0.445   PREDICTED: hypothetical protein 
LOC100129802          0.445   PREDICTED: hypothetical protein, partial 
LOC100133553          0.445   PREDICTED: hypothetical protein, partial 
LOC100132679          0.445   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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