Guide to the Human Genome
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Name: NRK Sequence: fasta or formatted (1582aa) NCBI GI: 118600963
Description:

Nik related kinase

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        112           2
 C cysteine            1.3         20           2
 D aspartate           5.9         93           4
 E glutamate           8.2        130           3
 F phenylalanine       3.0         48           2
 G glycine             5.5         87           3
 H histidine           2.7         43           2
 I isoleucine          4.7         75           3
 K lysine              5.6         88           2
 L leucine             9.0        143           3
 M methionine          1.5         24           2
 N asparagine          4.3         68           3
 P proline             6.3         99           2
 Q glutamine           6.6        105           3
 R arginine            6.8        107           3
 S serine              8.3        132           3
 T threonine           3.9         62           2
 V valine              5.6         88           2
 W tryptophan          1.2         19           1
 Y tyrosine            2.5         39           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Nik related kinase 
MAP4K4                0.125   mitogen-activated protein kinase kinase kinase kinas...
TNIK                  0.123   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.123   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.122   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.122   TRAF2 and NCK interacting kinase isoform 3 
MINK1                 0.121   misshapen/NIK-related kinase isoform 4 
TNIK                  0.121   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.121   TRAF2 and NCK interacting kinase isoform 5 
MINK1                 0.120   misshapen/NIK-related kinase isoform 2 
MINK1                 0.120   misshapen/NIK-related kinase isoform 3 
MINK1                 0.120   misshapen/NIK-related kinase isoform 1 
MAP4K4                0.120   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.119   mitogen-activated protein kinase kinase kinase kinas...
TNIK                  0.119   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.119   TRAF2 and NCK interacting kinase isoform 7 
MYO3A                 0.073   myosin IIIA 
MYO3B                 0.072   myosin IIIB isoform 1 
MYO3B                 0.072   myosin IIIB isoform 2 
SLK                   0.057   serine/threonine kinase 2 
STK4                  0.057   serine/threonine kinase 4 
MAP4K3                0.057   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.056   serine/threonine kinase 3 
MAP4K1                0.056   mitogen-activated protein kinase kinase kinase kina...
MAP4K1                0.056   mitogen-activated protein kinase kinase kinase kinase...
STK25                 0.056   serine/threonine kinase 25 
STK10                 0.055   serine/threonine kinase 10 
MAP4K5                0.055   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.055   mitogen-activated protein kinase kinase kinase kinas...
MAP4K2                0.055   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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