Name: SLC18A3 | Sequence: fasta or formatted (532aa) | NCBI GI: 118582257 | |
Description: vesicular acetylcholine transporter
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Referenced in: Acetylcholine
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 14.1 75 3 C cysteine 1.3 7 1 D aspartate 3.8 20 2 E glutamate 4.3 23 2 F phenylalanine 3.9 21 1 G glycine 7.3 39 3 H histidine 1.5 8 1 I isoleucine 4.3 23 1 K lysine 1.3 7 1 L leucine 13.7 73 4 M methionine 2.4 13 1 N asparagine 1.7 9 1 P proline 8.1 43 2 Q glutamine 1.7 9 1 R arginine 5.6 30 2 S serine 6.6 35 2 T threonine 4.3 23 2 V valine 8.6 46 2 W tryptophan 1.1 6 1 Y tyrosine 4.1 22 3 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 vesicular acetylcholine transporter SLC18A1 0.306 solute carrier family 18 (vesicular monoamine), mem... SLC18A1 0.306 solute carrier family 18 (vesicular monoamine), membe... SLC18A2 0.304 solute carrier family 18 (vesicular monoamine), memb... SLC18A1 0.281 solute carrier family 18 (vesicular monoamine), mem... SLC18A1 0.260 solute carrier family 18 (vesicular monoamine), mem... C6orf192 0.060 hypothetical protein LOC116843 SLC22A18 0.018 tumor suppressing subtransferable candidate 5 [Homo... SLC22A18 0.018 tumor suppressing subtransferable candidate 5 [Homo... MFSD10 0.014 major facilitator superfamily domain containing 10 ... MFSD10 0.014 major facilitator superfamily domain containing 10 ... SPNS1 0.014 spinster homolog 1 isoform 2 SPNS1 0.014 spinster homolog 1 isoform 1 SPNS1 0.014 spinster homolog 1 isoform 1 SLC16A2 0.012 solute carrier family 16, member 2 SPNS1 0.012 spinster homolog 1 isoform 3 SPNS1 0.012 spinster homolog 1 isoform 4 SLC17A5 0.010 sialin SLC17A3 0.010 solute carrier family 17 (sodium phosphate), member... SLC17A7 0.010 solute carrier family 17, member 7 SLC16A14 0.009 solute carrier family 16 (monocarboxylic acid transp... SLC22A1 0.008 solute carrier family 22 member 1 isoform b SLC22A1 0.008 solute carrier family 22 member 1 isoform a LOC100293848 0.008 PREDICTED: hypothetical protein LOC100290829 0.008 PREDICTED: hypothetical protein XP_002346522 LOC100288535 0.008 PREDICTED: hypothetical protein XP_002342360 MUC16 0.007 mucin 16 MFSD8 0.007 major facilitator superfamily domain containing 8 [H... PCSK4 0.007 proprotein convertase subtilisin/kexin type 4 SLC17A9 0.007 vesicular nucleotide transporter SLC17A9Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.