Guide to the Human Genome
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Name: SLC22A1 Sequence: fasta or formatted (554aa) NCBI GI: 4506999
Description:

solute carrier family 22 member 1 isoform a

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [506aa] solute carrier family 22 member 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         44           2
 C cysteine            2.9         16           1
 D aspartate           3.6         20           2
 E glutamate           4.0         22           2
 F phenylalanine       5.2         29           1
 G glycine             7.9         44           2
 H histidine           1.3          7           2
 I isoleucine          5.8         32           3
 K lysine              3.1         17           1
 L leucine            15.0         83           3
 M methionine          3.4         19           1
 N asparagine          3.1         17           1
 P proline             5.4         30           2
 Q glutamine           3.2         18           1
 R arginine            4.2         23           2
 S serine              6.3         35           2
 T threonine           5.2         29           1
 V valine              7.0         39           1
 W tryptophan          2.3         13           1
 Y tyrosine            3.1         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 22 member 1 isoform a 
SLC22A1               0.837   solute carrier family 22 member 1 isoform b 
SLC22A2               0.718   solute carrier family 22 member 2 
SLC22A3               0.483   solute carrier family 22 member 3 
SLC22A8               0.230   solute carrier family 22 member 8 
SLC22A5               0.229   solute carrier family 22 member 5 
SLC22A13              0.219   solute carrier family 22 (organic anion transporter...
SLC22A6               0.210   solute carrier family 22 member 6 isoform b 
SLC22A6               0.209   solute carrier family 22 member 6 isoform a 
SLC22A4               0.209   solute carrier family 22 member 4 
SLC22A16              0.199   solute carrier family 22, member 16 
SLC22A7               0.183   solute carrier family 22 member 7 isoform a 
SLC22A12              0.181   urate anion exchanger 1 isoform a 
SLC22A7               0.179   solute carrier family 22 member 7 isoform b 
SLC22A20              0.178   solute carrier family 22, member 20 
SLC22A6               0.173   solute carrier family 22 member 6 isoform c 
SLC22A6               0.172   solute carrier family 22 member 6 isoform d 
SLC22A11              0.169   solute carrier family 22 member 11 
SLC22A15              0.168   solute carrier family 22, member 15 
SLC22A24              0.167   solute carrier family 22, member 24 
SLC22A14              0.159   organic cation transporter like 4 
SLC22A10              0.154   solute carrier family 22, member 10 
SLC22A25              0.131   putative UST1-like organic anion transporter 
SLC22A9               0.124   solute carrier family 22 (organic anion/cation trans...
SVOP                  0.120   SV2 related protein 
SLC22A12              0.106   urate anion exchanger 1 isoform b 
LOC146429             0.096   PREDICTED: hypothetical protein LOC146429 isoform 1...
LOC146429             0.095   PREDICTED: hypothetical protein LOC146429 isoform 6...
SLC22A17              0.091   solute carrier family 22, member 17 isoform b 
SLC22A17              0.086   solute carrier family 22, member 17 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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