Guide to the Human Genome
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Name: SLC16A2 Sequence: fasta or formatted (613aa) NCBI GI: 5730045
Description:

solute carrier family 16, member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         43           4
 C cysteine            1.8         11           1
 D aspartate           2.6         16           1
 E glutamate           6.4         39           3
 F phenylalanine       6.5         40           2
 G glycine            10.8         66           4
 H histidine           1.6         10           1
 I isoleucine          5.2         32           2
 K lysine              2.6         16           2
 L leucine            10.1         62           3
 M methionine          3.6         22           2
 N asparagine          1.5          9           1
 P proline             9.3         57           3
 Q glutamine           4.2         26           2
 R arginine            4.7         29           2
 S serine              9.5         58           4
 T threonine           3.3         20           1
 V valine              5.7         35           3
 W tryptophan          1.1          7           1
 Y tyrosine            2.4         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 16, member 2 
SLC16A10              0.401   solute carrier family 16, member 10 
SLC16A3               0.124   solute carrier family 16, member 3 
SLC16A3               0.124   solute carrier family 16, member 3 
SLC16A3               0.124   solute carrier family 16, member 3 
SLC16A7               0.116   solute carrier family 16, member 7 
SLC16A1               0.114   solute carrier family 16, member 1 
SLC16A8               0.113   solute carrier family 16, member 8 
SLC16A13              0.112   monocarboxylate transporter 13 
SLC16A11              0.106   solute carrier family 16, member 11 
SLC16A12              0.102   solute carrier family 16 (monocarboxylic acid trans...
SLC16A5               0.097   solute carrier family 16, member 5 
SLC16A14              0.095   solute carrier family 16 (monocarboxylic acid transp...
LOC100133772          0.081   PREDICTED: similar to solute carrier family 16, mem...
SLC16A9               0.062   solute carrier family 16 (monocarboxylic acid transp...
SLC16A6               0.056   solute carrier family 16, member 6 
SLC16A4               0.049   solute carrier family 16, member 4 
DGKK                  0.038   diacylglycerol kinase kappa 
NOL3                  0.030   nucleolar protein 3 
SFPQ                  0.029   splicing factor proline/glutamine rich (polypyrimidin...
PHLDA1                0.026   pleckstrin homology-like domain, family A, member 1 ...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.025   WAS/WASL interacting protein family, member 1 
SETD1A                0.024   SET domain containing 1A 
RALGDS                0.024   ral guanine nucleotide dissociation stimulator isofo...
RALGDS                0.024   ral guanine nucleotide dissociation stimulator isof...
RP1L1                 0.022   retinitis pigmentosa 1-like 1 
PRRT2                 0.022   proline-rich transmembrane protein 2 
MLL4                  0.022   myeloid/lymphoid or mixed-lineage leukemia 4 
RAPH1                 0.022   Ras association and pleckstrin homology domains 1 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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