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Search of human proteins with 239751807
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens] 439 e-123
gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens] 439 e-123
gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens] 439 e-123
gi|4505865 plasminogen activator, urokinase receptor isoform 1 p... 47 9e-06
gi|146261165 phospholipase inhibitor [Homo sapiens] 45 4e-05
gi|110735433 CD177 molecule [Homo sapiens] 42 4e-04
gi|53829381 plasminogen activator, urokinase receptor isoform 3 ... 40 0.001
gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens] 38 0.005
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 35 0.058
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens] 34 0.075
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 34 0.075
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 34 0.075
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 34 0.075
gi|93004088 GPI-anchored metastasis-associated protein homolog [... 34 0.098
gi|53829379 plasminogen activator, urokinase receptor isoform 2 ... 33 0.17
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens] 33 0.17
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 32 0.29
gi|4759226 transforming growth factor, beta receptor I isoform 1... 31 0.64
gi|195963412 transforming growth factor, beta receptor I isoform... 31 0.64
gi|24430141 fibrillin 1 precursor [Homo sapiens] 30 1.1
gi|66346695 fibrillin 2 precursor [Homo sapiens] 30 1.1
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens] 30 1.9
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens] 30 1.9
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens] 30 1.9
gi|21265052 ADAM metallopeptidase with thrombospondin type 1 mot... 30 1.9
gi|110611167 ADAM metallopeptidase with thrombospondin type 1 mo... 30 1.9
gi|38490568 keratin associated protein 10-4 [Homo sapiens] 29 2.4
gi|239755070 PREDICTED: similar to proprotein convertase subtili... 29 3.2
gi|21071008 transcobalamin I precursor [Homo sapiens] 29 3.2
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 28 4.1
>gi|239757302 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 439 bits (1128), Expect = e-123
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
Query: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
>gi|239751807 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 439 bits (1128), Expect = e-123
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
Query: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
>gi|239746298 PREDICTED: similar to R28379_1 [Homo sapiens]
Length = 204
Score = 439 bits (1128), Expect = e-123
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA
Sbjct: 1 MRLSRRPETFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKA 60
Query: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT
Sbjct: 61 TSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLT 120
Query: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT
Sbjct: 121 ENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
Query: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
KPGAEVPTGTNVLFLHHIECTHSP
Sbjct: 181 KPGAEVPTGTNVLFLHHIECTHSP 204
>gi|4505865 plasminogen activator, urokinase receptor isoform 1
precursor [Homo sapiens]
Length = 335
Score = 47.4 bits (111), Expect = 9e-06
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 15/161 (9%)
Query: 27 LHCEICTAAGSRCHG---QMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSG 83
L C C ++ C Q C S ++ C+ +V +G+E +R G
Sbjct: 115 LECISCGSSDMSCERGRHQSLQCRSPEEQCLDVVTHWIQEGEEGRPKDDRHLRGCGYLPG 174
Query: 84 VISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGPMTH 143
+ + CC + CN + + L NL +NG C +C + C T
Sbjct: 175 CPGSNGFHNNDTFHFLKCCNTTKCNEGPI-LELENLPQNGRQCYSCKGNSTHGCSSEETF 233
Query: 144 ---CTGKENHCVSLSGHVQAGIFKPR---FAMRGCATESMC 178
C G N C+ V G +P+ + +RGCAT SMC
Sbjct: 234 LIDCRGPMNQCL-----VATGTHEPKNQSYMVRGCATASMC 269
Score = 33.1 bits (74), Expect = 0.17
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 15 VLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGC 74
+LL T + L C C G C +++ C+ +D C + + +G+EL K C
Sbjct: 11 LLLHTCVPASWGLRCMQCKTNGD-C--RVEECALGQDLCRTTIVRLWEEGEELELVEKSC 67
Query: 75 IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFR 134
S+ + +S G K +T C D CN +T L C +C +S
Sbjct: 68 THSEKT-NRTLSYRTGLKITSLT-EVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDM 125
Query: 135 --DKCMGPMTHCTGKENHCVSLSGH-VQAG 161
++ C E C+ + H +Q G
Sbjct: 126 SCERGRHQSLQCRSPEEQCLDVVTHWIQEG 155
Score = 28.5 bits (62), Expect = 4.1
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Query: 39 CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
C G M C LV T + K + +GC + C + +H+ S
Sbjct: 237 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 286
Query: 99 SFCCQSDGCNSAFLSV 114
CC GCN L V
Sbjct: 287 --CCTKSGCNHPDLDV 300
>gi|146261165 phospholipase inhibitor [Homo sapiens]
Length = 237
Score = 45.1 bits (105), Expect = 4e-05
Identities = 40/158 (25%), Positives = 64/158 (40%), Gaps = 11/158 (6%)
Query: 27 LHCEICTAAGSRCHGQMKT-CSSDKDTCVLLVGKATSKGKELVHTYKGCIRS-----QDC 80
L C C + C + + C S +T + A+S + V Y+ S ++
Sbjct: 20 LSCVQCNSWEKSCVNSIASECPSHANTSCIS-SSASSSLETPVRLYQNMFCSAENCSEET 78
Query: 81 YSGVISTTMGPKDHMVTSSFCCQSDGCN--SAFLSVPLTNLTENGLMCPACTASFRDKCM 138
+ + + ++H S CCQ C+ S L PL N++ N CPAC S C
Sbjct: 79 HITAFTVHVSAEEHFHFVSQCCQGKECSNTSDALDPPLKNVSSNA-ECPACYESNGTSCR 137
Query: 139 GPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATES 176
G C +E CV L ++ I ++GC+ S
Sbjct: 138 GKPWKCY-EEEQCVFLVAELKNDIESKSLVLKGCSNVS 174
>gi|110735433 CD177 molecule [Homo sapiens]
Length = 437
Score = 42.0 bits (97), Expect = 4e-04
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%)
Query: 72 KGCIRSQDCYSGVISTTMGPKDHMVTSSFCC-QSDGCNSAFLSVPL----TNLTENGLMC 126
KGC ++D V MGP +++ +F C Q D CN+ S+PL L C
Sbjct: 74 KGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRC 133
Query: 127 PACTASFRDKCMGPMTH--CTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMC 178
P C + + C+ T C HC ++ G ++GC + +C
Sbjct: 134 PVCLS--MEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPVC 185
Score = 33.5 bits (75), Expect = 0.13
Identities = 23/86 (26%), Positives = 29/86 (33%), Gaps = 8/86 (9%)
Query: 102 CQSDGCNSAFLSVPLTNL-------TENGLMCPACTASFRDKCMG-PMTHCTGKENHCVS 153
C SD CNSA S L N CP C G P C HC
Sbjct: 294 CSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYD 353
Query: 154 LSGHVQAGIFKPRFAMRGCATESMCF 179
H+ G + +++GC + F
Sbjct: 354 GYIHLSGGGLSTKMSIQGCVAQPSSF 379
>gi|53829381 plasminogen activator, urokinase receptor isoform 3
precursor [Homo sapiens]
Length = 290
Score = 40.0 bits (92), Expect = 0.001
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 116 LTNLTENGLMCPACTASFRDKCMGPMTH---CTGKENHCVSLSGHVQAGIFKPR---FAM 169
L NL +NG C +C + C T C G N C+ V G +P+ + +
Sbjct: 161 LENLPQNGRQCYSCKGNSTHGCSSEETFLIDCRGPMNQCL-----VATGTHEPKNQSYMV 215
Query: 170 RGCATESMC 178
RGCAT SMC
Sbjct: 216 RGCATASMC 224
Score = 28.5 bits (62), Expect = 4.1
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 12/76 (15%)
Query: 39 CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
C G M C LV T + K + +GC + C + +H+ S
Sbjct: 192 CRGPMNQC---------LVATGTHEPKNQSYMVRGCATASMCQHAHLGDAFS-MNHIDVS 241
Query: 99 SFCCQSDGCNSAFLSV 114
CC GCN L V
Sbjct: 242 --CCTKSGCNHPDLDV 255
>gi|167466266 LY6/PLAUR domain containing 4 [Homo sapiens]
Length = 246
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 16/134 (11%)
Query: 54 VLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS-SFCCQSDGCNSAFL 112
++ + T++G V +KGC S Y IS + P + S S C+S CN+
Sbjct: 65 LVFIETGTARG---VVGFKGC-SSSSSYPAQISYLVSPPGVSIASYSRVCRSYLCNNLTN 120
Query: 113 SVPLTNL--------TENGLMCPACTASFRDKCMGPMT---HCTGKENHCVSLSGHVQAG 161
P L T CP C C+ C + C S + QAG
Sbjct: 121 LEPFVKLKASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQAG 180
Query: 162 IFKPRFAMRGCATE 175
F + GCA E
Sbjct: 181 FLNTTFLLMGCARE 194
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 34.7 bits (78), Expect = 0.058
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
T LL L G L C +CT++ + H + C + C K V
Sbjct: 3 TALLLLAALAVATGPALTLRCHVCTSSSNCKHSVV--CPASSRFC---------KTTNTV 51
Query: 69 HTYKGCIRSQDCYSGVIS--TTMGPKDHMVTSSFCCQSDGCN 108
+G + +DC T G +S+ CCQ D CN
Sbjct: 52 EPLRGNLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCN 93
>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
Length = 1586
Score = 34.3 bits (77), Expect = 0.075
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 21/103 (20%)
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
T++GC ++ YS + + + H + C+ +GCN AF + T+ E
Sbjct: 506 TFEGCSKA---YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK 562
Query: 123 GLMC--PACTASFRDKCM---------GPMTHCTGKENHCVSL 154
+C P CT + D GP H T K+ + V L
Sbjct: 563 PYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHL 605
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 34.3 bits (77), Expect = 0.075
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
T LL +L+ + L L L C +C G C M+ C + C+ T
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57
Query: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
+ K C+ C+ V G H T+S CCQ D CN L+ P T
Sbjct: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 34.3 bits (77), Expect = 0.075
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
T LL +L+ + L L L C +C G C M+ C + C+ T
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57
Query: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
+ K C+ C+ V G H T+S CCQ D CN L+ P T
Sbjct: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 34.3 bits (77), Expect = 0.075
Identities = 32/110 (29%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 9 TFLLAFVLLCTL-LGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKEL 67
T LL +L+ + L L L C +C G C M+ C + C+ T
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAYNGDNCFNPMR-CPAMVAYCMTT---RTYYTPTR 57
Query: 68 VHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLT 117
+ K C+ C+ V G H T+S CCQ D CN L+ P T
Sbjct: 58 MKVSKSCVPR--CFETVYD---GYSKHASTTS-CCQYDLCNGTGLATPAT 101
>gi|93004088 GPI-anchored metastasis-associated protein homolog
[Homo sapiens]
Length = 346
Score = 33.9 bits (76), Expect = 0.098
Identities = 50/203 (24%), Positives = 71/203 (34%), Gaps = 42/203 (20%)
Query: 14 FVLLCTLLGLGCPLHCEICTA-AGSRCH-GQMKT--CSSDKDTCVLLVGKATSKGKELVH 69
++LL L G L C C A C +MKT C+ D C VG E +H
Sbjct: 18 WLLLLLLRGGAQALECYSCVQKADDGCSPNKMKTVKCAPGVDVCTEAVGAV-----ETIH 72
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFC----CQSDGCNSAFLSVPLTNLTE---- 121
+ + + C SG+ D +F C D CN+ NLT
Sbjct: 73 G-QFSLAVRGCGSGLPGKNDRGLDLHGLLAFIQLQQCAQDRCNAKL------NLTSRALD 125
Query: 122 ----------NGLMCPACTASFRDKCMG---PMTHCTGKENH----CVSLSGHVQAGIFK 164
NG+ C +C R+ C G P+ C +H C + + A
Sbjct: 126 PAGNESAYPPNGVECYSCVGLSREACQGTSPPVVSCYNASDHVYKGCFDGNVTLTAANVT 185
Query: 165 PRFAMRGCATESMCFTKPGAEVP 187
+RGC + C T+ G P
Sbjct: 186 VSLPVRGCVQDEFC-TRDGVTGP 207
>gi|53829379 plasminogen activator, urokinase receptor isoform 2
precursor [Homo sapiens]
Length = 281
Score = 33.1 bits (74), Expect = 0.17
Identities = 36/150 (24%), Positives = 59/150 (39%), Gaps = 8/150 (5%)
Query: 15 VLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGC 74
+LL T + L C C G C +++ C+ +D C + + +G+EL K C
Sbjct: 11 LLLHTCVPASWGLRCMQCKTNGD-C--RVEECALGQDLCRTTIVRLWEEGEELELVEKSC 67
Query: 75 IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFR 134
S+ + +S G K +T C D CN +T L C +C +S
Sbjct: 68 THSEKT-NRTLSYRTGLKITSLT-EVVCGLDLCNQGNSGRAVTYSRSRYLECISCGSSDM 125
Query: 135 --DKCMGPMTHCTGKENHCVSLSGH-VQAG 161
++ C E C+ + H +Q G
Sbjct: 126 SCERGRHQSLQCRSPEEQCLDVVTHWIQEG 155
>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
Length = 1580
Score = 33.1 bits (74), Expect = 0.17
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 21/97 (21%)
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
T++GC ++ YS + + + H + C+ +GCN AF + T+ E
Sbjct: 549 TFEGCTKA---YSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEK 605
Query: 123 GLMC--PACTASFRDKCM---------GPMTHCTGKE 148
+C P CT + D GP H T K+
Sbjct: 606 PYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQ 642
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 32.3 bits (72), Expect = 0.29
Identities = 30/101 (29%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 9 TFLLAFVLLCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELV 68
T LL +L L + C CT G HG C D CV + S ++L
Sbjct: 5 TGLLLAAVLSLQLAAAEAIWCHQCTGFGGCSHG--SRCLRDSTHCVTTATRVLSNTEDLP 62
Query: 69 HTYKGC-IRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCN 108
K C I D + S +GP S CCQ+ CN
Sbjct: 63 LVTKMCHIGCPD----IPSLGLGP----YVSIACCQTSLCN 95
>gi|4759226 transforming growth factor, beta receptor I isoform 1
precursor [Homo sapiens]
Length = 503
Score = 31.2 bits (69), Expect = 0.64
Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 12/97 (12%)
Query: 33 TAAGSRCHGQMKTCSSDKDTCV---LLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTM 89
TA CH C+ D TCV L T +++H CI D
Sbjct: 32 TALQCFCH----LCTKDNFTCVTDGLCFVSVTETTDKVIHNSM-CIAEIDLIPRDRPFVC 86
Query: 90 GP--KDHMVTSSFCCQSDGCNSAFLSVPLTNLTENGL 124
P K VT+++CC D CN + +P T + GL
Sbjct: 87 APSSKTGSVTTTYCCNQDHCNK--IELPTTVKSSPGL 121
>gi|195963412 transforming growth factor, beta receptor I isoform 2
precursor [Homo sapiens]
Length = 426
Score = 31.2 bits (69), Expect = 0.64
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 33 TAAGSRCHGQMKTCSSDKDTCV---LLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTM 89
TA CH C+ D TCV L T +++H CI D
Sbjct: 32 TALQCFCH----LCTKDNFTCVTDGLCFVSVTETTDKVIHNSM-CIAEIDLIPRDRPFVC 86
Query: 90 GP--KDHMVTSSFCCQSDGCNSAFLSVPLTNL 119
P K VT+++CC D CN + +P T L
Sbjct: 87 APSSKTGSVTTTYCCNQDHCNK--IELPTTGL 116
>gi|24430141 fibrillin 1 precursor [Homo sapiens]
Length = 2871
Score = 30.4 bits (67), Expect = 1.1
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 135 DKCMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMR----GCATESMCFTKPG 183
D+C CT K+ C +L G I P + R GC E+ C TKPG
Sbjct: 2249 DECEEGKHDCTEKQMECKNLIGTYMC-ICGPGYQRRPDGEGCVDENECQTKPG 2300
>gi|66346695 fibrillin 2 precursor [Homo sapiens]
Length = 2912
Score = 30.4 bits (67), Expect = 1.1
Identities = 42/171 (24%), Positives = 58/171 (33%), Gaps = 40/171 (23%)
Query: 64 GKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVPLTNL---- 119
G L +T C+ + +C G + V SF C CN F P+ N
Sbjct: 2201 GYNLDYTGVRCVDTDECSIG--NPCGNGTCTNVIGSFECN---CNEGFEPGPMMNCEDIN 2255
Query: 120 --TENGLMCP----------ACTASFR-------------DKCMGPMTHCTGKENHCVSL 154
+N L+C CT D+C + C + C +L
Sbjct: 2256 ECAQNPLLCAFRCMNTFGSYECTCPIGYALREDQKMCKDLDECAEGLHDCESRGMMCKNL 2315
Query: 155 SGHVQAGIFKPRFAMR----GCATESMCFTKPG-AEVPTGTNVLFLHHIEC 200
G I P A R GC E+ C TKPG E N++ + EC
Sbjct: 2316 IGTFMC-ICPPGMARRPDGEGCVDENECRTKPGICENGRCVNIIGSYRCEC 2365
>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
Length = 978
Score = 29.6 bits (65), Expect = 1.9
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
T++GC +S YS + + + H + C+ +GC+ AF + T+ E
Sbjct: 176 TFEGCRKS---YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 232
Query: 123 GLMC--PACTASFRD 135
+C P CT + D
Sbjct: 233 PYVCKLPGCTKRYTD 247
>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
Length = 1106
Score = 29.6 bits (65), Expect = 1.9
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLSVP-------LTNLTEN 122
T++GC +S YS + + + H + C+ +GC+ AF + T+ E
Sbjct: 304 TFEGCRKS---YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 360
Query: 123 GLMC--PACTASFRD 135
+C P CT + D
Sbjct: 361 PYVCKLPGCTKRYTD 375
>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
Length = 753
Score = 29.6 bits (65), Expect = 1.9
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 70 TYKGCIRSQDCYSGVISTTMGPKDHMVTSSFCCQSDGCNSAFLS 113
T++GC R+ YS + K H +F C +GC AFL+
Sbjct: 143 TFEGCPRT---YSTAGNLRTHQKTHRGEYTFVCNQEGCGKAFLT 183
>gi|21265052 ADAM metallopeptidase with thrombospondin type 1
motif, 14 isoform 2 preproprotein [Homo sapiens]
Length = 1223
Score = 29.6 bits (65), Expect = 1.9
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 17 LCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKG 73
L LL PLHC +C AAGSR ++ D V + +G+ L H G
Sbjct: 4 LRALLSYLLPLHCALCAAAGSRT-PELHLSGKLSDYGVTVPCSTDFRGRFLSHVVSG 59
>gi|110611167 ADAM metallopeptidase with thrombospondin type 1
motif, 14 isoform 1 preproprotein [Homo sapiens]
Length = 1226
Score = 29.6 bits (65), Expect = 1.9
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 17 LCTLLGLGCPLHCEICTAAGSRCHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKG 73
L LL PLHC +C AAGSR ++ D V + +G+ L H G
Sbjct: 4 LRALLSYLLPLHCALCAAAGSRT-PELHLSGKLSDYGVTVPCSTDFRGRFLSHVVSG 59
>gi|38490568 keratin associated protein 10-4 [Homo sapiens]
Length = 401
Score = 29.3 bits (64), Expect = 2.4
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 6/90 (6%)
Query: 98 SSFCCQSDGCNSAFLSVPLTNLTENGLMCPACTASFRDKCMGPMTHCTGKENHCVSLSGH 157
SS CCQ C A + ++ + P C K +G + C+G + C S
Sbjct: 247 SSSCCQQSSCQPACCT---SSPCQQACCVPVCCKPVCCKPVGSVPICSGASSLCCQQSS- 302
Query: 158 VQAGIFKPRFAMRGCATESMCFTKPGAEVP 187
Q + +GC C KP + VP
Sbjct: 303 CQPACCTSSQSQQGCCVPVCC--KPVSCVP 330
>gi|239755070 PREDICTED: similar to proprotein convertase
subtilisin/kexin type 5 [Homo sapiens]
Length = 853
Score = 28.9 bits (63), Expect = 3.2
Identities = 33/150 (22%), Positives = 48/150 (32%), Gaps = 19/150 (12%)
Query: 39 CHGQMKTCSSDKDTCVLLVGKATSKGKELVHTYKGCIRSQDCYSGVISTTMGPKDHMVTS 98
CH KTC+ C + KG L+ + C+ S C G + T
Sbjct: 176 CHSSCKTCNGSATLCT-----SCPKGAYLLA--QACVSS--CPQGTWPSVRSGSCENCTE 226
Query: 99 S--FCCQSDGCNSAFLSVPLTNLTENGLMCPACTAS------FRDKCMGPMTHCTGKENH 150
+ C +D C + G C ++C P C G +
Sbjct: 227 ACAICSGADLCKKCQMQPGHPLFLHEGRCYSKCPEGSYAEDGICERCSSPCRTCEGNATN 286
Query: 151 CVSL-SGHV-QAGIFKPRFAMRGCATESMC 178
C S GHV G+ + R A E +C
Sbjct: 287 CHSCEGGHVLHHGVCQENCPERHVAVEGVC 316
>gi|21071008 transcobalamin I precursor [Homo sapiens]
Length = 433
Score = 28.9 bits (63), Expect = 3.2
Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 75 IRSQDCYSGVISTTMGPKDHM----VTSSFCCQSDGCNSAFLSVPLTNLTENGLMCPACT 130
I S+ +G+I T + M V+S + ++D L+ LT +++ P
Sbjct: 228 ILSEKKENGLIGNTFSTGEAMQALFVSSDYYNENDWNCQQTLNTVLTEISQGAFSNPNAA 287
Query: 131 ASFRDKCMGPMTHCTGKENHCVSLSGHVQAGIFKP 165
A MG K++ CVS SG+ +P
Sbjct: 288 AQVLPALMGKTFLDINKDSSCVSASGNFNISADEP 322
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 28.5 bits (62), Expect = 4.1
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 122 NGLMCPACTASFRDK-CMGPMTHCTGKENHCVSLSGHVQAGIFKPRFAMRGCATESMCFT 180
+ LMC +C + C+ P T C+ ++N+CV++S G G + C
Sbjct: 19 SSLMCFSCLNQKSNLYCLKP-TICSDQDNYCVTVSASAGIG----NLVTFGHSLSKTC-- 71
Query: 181 KPGAEVPTGTNV 192
P +P G NV
Sbjct: 72 SPACPIPEGVNV 83
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.135 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,701,645
Number of Sequences: 37866
Number of extensions: 389609
Number of successful extensions: 1439
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 1383
Number of HSP's gapped (non-prelim): 86
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.