Guide to the Human Genome
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Name: MTF1 Sequence: fasta or formatted (753aa) NCBI GI: 112790163
Description:

metal-regulatory transcription factor 1

Referenced in:

Metallothioneins
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         54           3
 C cysteine            2.8         21           1
 D aspartate           4.2         32           3
 E glutamate           7.0         53           3
 F phenylalanine       3.6         27           2
 G glycine             6.2         47           2
 H histidine           3.6         27           2
 I isoleucine          3.6         27           3
 K lysine              3.6         27           1
 L leucine             8.2         62           2
 M methionine          1.3         10           1
 N asparagine          3.7         28           2
 P proline             9.6         72           4
 Q glutamine           6.8         51           2
 R arginine            3.1         23           2
 S serine             11.6         87           4
 T threonine           7.8         59           2
 V valine              4.5         34           2
 W tryptophan          0.1          1           1
 Y tyrosine            1.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   metal-regulatory transcription factor 1 
ZNF143                0.107   zinc finger protein 143 
ZNF76                 0.101   zinc finger protein 76 (expressed in testis) 
ZNF782                0.087   zinc finger protein 782 
ZNF700                0.086   zinc finger protein 700 
ZNF180                0.084   zinc finger protein 180 
ZNF558                0.084   zinc finger protein 558 
ZNF709                0.083   zinc finger protein 709 isoform b 
ZNF709                0.083   zinc finger protein 709 isoform a 
ZNF544                0.083   zinc finger protein 544 
ZNF333                0.083   zinc finger protein 333 
ZNF778                0.082   zinc finger protein 778 
ZNF121                0.082   zinc finger protein 121 
ZNF71                 0.082   zinc finger protein 71 
ZNF235                0.082   zinc finger protein 93 homolog 
ZNF823                0.082   ZFP-36 for a zinc finger protein 
ZNF410                0.082   zinc finger protein 410 
ZNF624                0.082   zinc finger protein 624 
ZNF227                0.082   zinc finger protein 227 
ZNF433                0.082   zinc finger protein 433 
ZNF14                 0.081   zinc finger protein 14 
ZNF596                0.081   zinc finger protein 596 
ZNF596                0.081   zinc finger protein 596 
ZNF596                0.081   zinc finger protein 596 
ZNF568                0.081   zinc finger protein 568 
ZNF77                 0.081   zinc finger protein 77 
ZNF177                0.081   zinc finger protein 177 
ZXDB                  0.081   zinc finger, X-linked, duplicated B 
ZNF136                0.080   zinc finger protein 136 
LOC646864             0.080   PREDICTED: similar to hCG36734 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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