RTN1 267

Name: RTN1	Sequence: fasta or formatted (776aa)		NCBI GI: 10863935
Description: reticulon 1 isoform A		Referenced in: Oligodendrocytes and Myelin
Other entries for this name: alt prot [208aa] reticulon 1 isoform C alt prot [356aa] reticulon 1 isoform B
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 66 2 C cysteine 0.6 5 1 D aspartate 5.7 44 2 E glutamate 10.1 78 2 F phenylalanine 2.4 19 1 G glycine 6.8 53 2 H histidine 1.7 13 2 I isoleucine 5.2 40 2 K lysine 5.0 39 1 L leucine 9.0 70 4 M methionine 1.4 11 1 N asparagine 1.3 10 1 P proline 10.2 79 3 Q glutamine 4.3 33 1 R arginine 3.7 29 2 S serine 9.8 76 3 T threonine 6.2 48 3 V valine 5.3 41 2 W tryptophan 0.4 3 1 Y tyrosine 2.4 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 reticulon 1 isoform A RTN1 0.446 reticulon 1 isoform B RTN1 0.224 reticulon 1 isoform C RTN4 0.173 reticulon 4 isoform B RTN4 0.172 reticulon 4 isoform D RTN4 0.162 reticulon 4 isoform E RTN4 0.162 reticulon 4 isoform C RTN4 0.162 reticulon 4 isoform A RTN3 0.141 reticulon 3 isoform a RTN3 0.139 reticulon 3 isoform c RTN3 0.137 reticulon 3 isoform b RTN2 0.123 reticulon 2 isoform B RTN3 0.118 reticulon 3 isoform d RTN2 0.114 reticulon 2 isoform A RTN2 0.114 reticulon 2 isoform C NEFH 0.026 neurofilament, heavy polypeptide 200kDa PRG4 0.021 proteoglycan 4 isoform D PRG4 0.021 proteoglycan 4 isoform C PRG4 0.021 proteoglycan 4 isoform B PRG4 0.021 proteoglycan 4 isoform A NACA 0.020 nascent polypeptide-associated complex alpha subuni... MLL2 0.020 myeloid/lymphoid or mixed-lineage leukemia 2 RP1L1 0.019 retinitis pigmentosa 1-like 1 NOLC1 0.018 nucleolar and coiled-body phosphoprotein 1 MAP1A 0.018 microtubule-associated protein 1A TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform c ... PCLO 0.017 piccolo isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.