RTN1 30089

Name: RTN1	Sequence: fasta or formatted (356aa)		NCBI GI: 45827778
Description: reticulon 1 isoform B		Referenced in: Oligodendrocytes and Myelin
Other entries for this name: alt prot [776aa] reticulon 1 isoform A alt prot [208aa] reticulon 1 isoform C
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 33 2 C cysteine 0.6 2 1 D aspartate 4.2 15 1 E glutamate 7.6 27 2 F phenylalanine 3.9 14 1 G glycine 5.9 21 2 H histidine 1.4 5 1 I isoleucine 4.5 16 2 K lysine 4.8 17 1 L leucine 12.9 46 4 M methionine 1.7 6 1 N asparagine 1.4 5 1 P proline 9.0 32 3 Q glutamine 5.1 18 1 R arginine 4.2 15 2 S serine 9.0 32 3 T threonine 4.2 15 1 V valine 6.5 23 2 W tryptophan 0.6 2 1 Y tyrosine 3.4 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 reticulon 1 isoform B RTN1 1.000 reticulon 1 isoform A RTN1 0.501 reticulon 1 isoform C RTN4 0.388 reticulon 4 isoform B RTN4 0.380 reticulon 4 isoform D RTN4 0.364 reticulon 4 isoform C RTN4 0.362 reticulon 4 isoform E RTN4 0.362 reticulon 4 isoform A RTN3 0.315 reticulon 3 isoform a RTN3 0.311 reticulon 3 isoform c RTN3 0.308 reticulon 3 isoform b RTN2 0.275 reticulon 2 isoform B RTN3 0.265 reticulon 3 isoform d RTN2 0.254 reticulon 2 isoform A RTN2 0.254 reticulon 2 isoform C RGS3 0.027 regulator of G-protein signalling 3 isoform 6 [Homo... RGS3 0.027 regulator of G-protein signalling 3 isoform 2 RGS3 0.027 regulator of G-protein signalling 3 isoform 1 MAPK7 0.025 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.025 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.025 mitogen-activated protein kinase 7 isoform 1 MAPK7 0.025 mitogen-activated protein kinase 7 isoform 2 OGFR 0.025 opioid growth factor receptor SHANK3 0.025 SH3 and multiple ankyrin repeat domains 3 NCOR2 0.024 nuclear receptor co-repressor 2 isoform 1 COL17A1 0.024 alpha 1 type XVII collagen SETD1B 0.024 SET domain containing 1B PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.