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Search of human proteins with 239747651
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo
sapiens]
(324 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo ... 683 0.0
gi|239753089 PREDICTED: hypothetical protein [Homo sapiens] 199 2e-51
gi|239741520 PREDICTED: hypothetical protein XP_002342220 [Homo ... 190 1e-48
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 49 5e-06
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 49 5e-06
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 49 5e-06
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 49 5e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 48 1e-05
gi|134142824 forkhead box D2 [Homo sapiens] 47 2e-05
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 45 1e-04
gi|37595553 ring finger protein 111 [Homo sapiens] 43 3e-04
gi|153792074 proline rich 12 [Homo sapiens] 43 3e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 4e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 4e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 43 4e-04
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 42 6e-04
gi|37693995 Kruppel-like factor 13 [Homo sapiens] 42 7e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 42 0.001
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239754611 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|91208420 bassoon protein [Homo sapiens] 41 0.001
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 41 0.001
gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ... 41 0.002
gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ... 41 0.002
gi|239508892 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 41 0.002
gi|61743948 abl-interactor 1 isoform d [Homo sapiens] 41 0.002
gi|61743946 abl-interactor 1 isoform c [Homo sapiens] 41 0.002
gi|61743944 abl-interactor 1 isoform b [Homo sapiens] 41 0.002
gi|14249150 single stranded DNA binding protein 4 isoform a [Hom... 40 0.002
>gi|239747651 PREDICTED: hypothetical protein XP_002348127 [Homo
sapiens]
Length = 324
Score = 683 bits (1762), Expect = 0.0
Identities = 324/324 (100%), Positives = 324/324 (100%)
Query: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY
Sbjct: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
Query: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPP 120
LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPP
Sbjct: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPP 120
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRG 180
EPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRG
Sbjct: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRG 180
Query: 181 APVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGG 240
APVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGG
Sbjct: 181 APVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGG 240
Query: 241 ALPAGQLPGAPGARASRHRGSGSNHSPPAGCFLRLFFCCCRDPGLFSPLLFKVFSCCTGS 300
ALPAGQLPGAPGARASRHRGSGSNHSPPAGCFLRLFFCCCRDPGLFSPLLFKVFSCCTGS
Sbjct: 241 ALPAGQLPGAPGARASRHRGSGSNHSPPAGCFLRLFFCCCRDPGLFSPLLFKVFSCCTGS 300
Query: 301 APSTSFPVVLTFLFPRVFYARRTT 324
APSTSFPVVLTFLFPRVFYARRTT
Sbjct: 301 APSTSFPVVLTFLFPRVFYARRTT 324
>gi|239753089 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 199 bits (507), Expect = 2e-51
Identities = 119/211 (56%), Positives = 126/211 (59%), Gaps = 20/211 (9%)
Query: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY
Sbjct: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
Query: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPP 120
LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQ +R A AP R PP
Sbjct: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQKGRR-CCHRRCARGLRPAPLR---SGSPP 116
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRA----- 175
PP + A R + P P A P + + PP S RA
Sbjct: 117 ARAPPTPTVAACDWNAREGSYGSP--------PPLAGPPCQSDDCPPPPPPSRRAAFPLE 168
Query: 176 ---GGGRGAPVQPLSVNRRSPTPGGREAGEG 203
G GR P + + RE G G
Sbjct: 169 ESEGWGRAGSAGPAAFGQSQKPNARREGGRG 199
>gi|239741520 PREDICTED: hypothetical protein XP_002342220 [Homo
sapiens]
Length = 96
Score = 190 bits (483), Expect = 1e-48
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY
Sbjct: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
Query: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQ 91
LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQ
Sbjct: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQ 91
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 49.3 bits (116), Expect = 5e-06
Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 26/210 (12%)
Query: 3 TWARDAAGRSE----SAPRSRSPAHGPARTR------------ASSPPQEGAERATRSRP 46
T A+D A S+ P++ + GPA T AS+ P+E +S P
Sbjct: 182 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 241
Query: 47 RVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPE 106
+ P + ++P+PTT K T P P T+ A T +AP
Sbjct: 242 TTPKEPAPTTTKSAPTTPKEPAPTTTKE-----PAPTTPKEPAPTTTKEPAPTTTKSAP- 295
Query: 107 DSAPRRFAP-DPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE 165
+ P+ AP P+ P P P++ P T + P +PTT P P
Sbjct: 296 -TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEP--APTA 352
Query: 166 PPSHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
P + P +P + P+P
Sbjct: 353 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 382
Score = 47.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 13 ESAPRS-RSPAHGPARTRASSP--PQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
E AP + + PA P T+ SP P+E A T+S P + P + ++PSP
Sbjct: 363 EPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 420
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP---------DPRPP 120
TT K T P P T + A T P + P+ AP P+ P
Sbjct: 421 TTTKE-----PAPTTPKEPAP-TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 474
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPL------------VSPTTAHHPL-RLPEEPP 167
P P++ P T + T P L P ++PTT P PEEP
Sbjct: 475 APTTPKETAP---TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 531
Query: 168 SHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
+ P +P + P P
Sbjct: 532 P---TTPKAAAPNTPKEPAPTTPKEPAP 556
Score = 45.8 bits (107), Expect = 5e-05
Identities = 46/191 (24%), Positives = 69/191 (36%), Gaps = 15/191 (7%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTT 71
E AP + + PA + A + +E A T+S P + P P +P ++P+PTT
Sbjct: 261 EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-PTTP------KKPAPTT 313
Query: 72 FKSVFVVVTVHTEKLAP-HPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQLL 129
K P P T + A T P +AP++ AP P+ P P P++
Sbjct: 314 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 373
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPL-----RLPEEPPSHWRSLRAGGGRGAPVQ 184
P T + P +PTT P P P + P +
Sbjct: 374 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 433
Query: 185 PLSVNRRSPTP 195
P + P P
Sbjct: 434 PAPTTPKKPAP 444
Score = 29.6 bits (65), Expect = 3.8
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNS--QQPSP 69
E AP + + PA + A + P+E A + P +P L + ++P+P
Sbjct: 449 EPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 508
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQL 128
TT + + T P P T A T A + P+ AP P+ P P P++
Sbjct: 509 TTPEEL-----APTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562
Query: 129 LPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
P T + +PTT P + P+
Sbjct: 563 APTTPKETAPTTPKG-------TAPTTLKEPAPTTPKKPA 595
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 49.3 bits (116), Expect = 5e-06
Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 26/210 (12%)
Query: 3 TWARDAAGRSE----SAPRSRSPAHGPARTR------------ASSPPQEGAERATRSRP 46
T A+D A S+ P++ + GPA T AS+ P+E +S P
Sbjct: 223 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 282
Query: 47 RVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPE 106
+ P + ++P+PTT K T P P T+ A T +AP
Sbjct: 283 TTPKEPAPTTTKSAPTTPKEPAPTTTKE-----PAPTTPKEPAPTTTKEPAPTTTKSAP- 336
Query: 107 DSAPRRFAP-DPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE 165
+ P+ AP P+ P P P++ P T + P +PTT P P
Sbjct: 337 -TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEP--APTA 393
Query: 166 PPSHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
P + P +P + P+P
Sbjct: 394 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 423
Score = 47.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 13 ESAPRS-RSPAHGPARTRASSP--PQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
E AP + + PA P T+ SP P+E A T+S P + P + ++PSP
Sbjct: 404 EPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 461
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP---------DPRPP 120
TT K T P P T + A T P + P+ AP P+ P
Sbjct: 462 TTTKE-----PAPTTPKEPAP-TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 515
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPL------------VSPTTAHHPL-RLPEEPP 167
P P++ P T + T P L P ++PTT P PEEP
Sbjct: 516 APTTPKETAP---TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 572
Query: 168 SHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
+ P +P + P P
Sbjct: 573 P---TTPKAAAPNTPKEPAPTTPKEPAP 597
Score = 45.8 bits (107), Expect = 5e-05
Identities = 46/191 (24%), Positives = 69/191 (36%), Gaps = 15/191 (7%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTT 71
E AP + + PA + A + +E A T+S P + P P +P ++P+PTT
Sbjct: 302 EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-PTTP------KKPAPTT 354
Query: 72 FKSVFVVVTVHTEKLAP-HPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQLL 129
K P P T + A T P +AP++ AP P+ P P P++
Sbjct: 355 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 414
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPL-----RLPEEPPSHWRSLRAGGGRGAPVQ 184
P T + P +PTT P P P + P +
Sbjct: 415 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 474
Query: 185 PLSVNRRSPTP 195
P + P P
Sbjct: 475 PAPTTPKKPAP 485
Score = 29.6 bits (65), Expect = 3.8
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNS--QQPSP 69
E AP + + PA + A + P+E A + P +P L + ++P+P
Sbjct: 490 EPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 549
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQL 128
TT + + T P P T A T A + P+ AP P+ P P P++
Sbjct: 550 TTPEEL-----APTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Query: 129 LPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
P T + +PTT P + P+
Sbjct: 604 APTTPKETAPTTPKG-------TAPTTLKEPAPTTPKKPA 636
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 49.3 bits (116), Expect = 5e-06
Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 26/210 (12%)
Query: 3 TWARDAAGRSE----SAPRSRSPAHGPARTR------------ASSPPQEGAERATRSRP 46
T A+D A S+ P++ + GPA T AS+ P+E +S P
Sbjct: 275 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 334
Query: 47 RVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPE 106
+ P + ++P+PTT K T P P T+ A T +AP
Sbjct: 335 TTPKEPAPTTTKSAPTTPKEPAPTTTKE-----PAPTTPKEPAPTTTKEPAPTTTKSAP- 388
Query: 107 DSAPRRFAP-DPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE 165
+ P+ AP P+ P P P++ P T + P +PTT P P
Sbjct: 389 -TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEP--APTA 445
Query: 166 PPSHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
P + P +P + P+P
Sbjct: 446 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 475
Score = 47.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 13 ESAPRS-RSPAHGPARTRASSP--PQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
E AP + + PA P T+ SP P+E A T+S P + P + ++PSP
Sbjct: 456 EPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 513
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP---------DPRPP 120
TT K T P P T + A T P + P+ AP P+ P
Sbjct: 514 TTTKE-----PAPTTPKEPAP-TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 567
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPL------------VSPTTAHHPL-RLPEEPP 167
P P++ P T + T P L P ++PTT P PEEP
Sbjct: 568 APTTPKETAP---TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 624
Query: 168 SHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
+ P +P + P P
Sbjct: 625 P---TTPKAAAPNTPKEPAPTTPKEPAP 649
Score = 45.8 bits (107), Expect = 5e-05
Identities = 46/191 (24%), Positives = 69/191 (36%), Gaps = 15/191 (7%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTT 71
E AP + + PA + A + +E A T+S P + P P +P ++P+PTT
Sbjct: 354 EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-PTTP------KKPAPTT 406
Query: 72 FKSVFVVVTVHTEKLAP-HPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQLL 129
K P P T + A T P +AP++ AP P+ P P P++
Sbjct: 407 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 466
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPL-----RLPEEPPSHWRSLRAGGGRGAPVQ 184
P T + P +PTT P P P + P +
Sbjct: 467 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 526
Query: 185 PLSVNRRSPTP 195
P + P P
Sbjct: 527 PAPTTPKKPAP 537
Score = 29.6 bits (65), Expect = 3.8
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNS--QQPSP 69
E AP + + PA + A + P+E A + P +P L + ++P+P
Sbjct: 542 EPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 601
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQL 128
TT + + T P P T A T A + P+ AP P+ P P P++
Sbjct: 602 TTPEEL-----APTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Query: 129 LPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
P T + +PTT P + P+
Sbjct: 656 APTTPKETAPTTPKG-------TAPTTLKEPAPTTPKKPA 688
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 49.3 bits (116), Expect = 5e-06
Identities = 50/210 (23%), Positives = 76/210 (36%), Gaps = 26/210 (12%)
Query: 3 TWARDAAGRSE----SAPRSRSPAHGPARTR------------ASSPPQEGAERATRSRP 46
T A+D A S+ P++ + GPA T AS+ P+E +S P
Sbjct: 316 TSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAP 375
Query: 47 RVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPE 106
+ P + ++P+PTT K T P P T+ A T +AP
Sbjct: 376 TTPKEPAPTTTKSAPTTPKEPAPTTTKE-----PAPTTPKEPAPTTTKEPAPTTTKSAP- 429
Query: 107 DSAPRRFAP-DPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE 165
+ P+ AP P+ P P P++ P T + P +PTT P P
Sbjct: 430 -TTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEP--APTA 486
Query: 166 PPSHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
P + P +P + P+P
Sbjct: 487 PKKPAPTTPKEPAPTTPKEPAPTTTKEPSP 516
Score = 47.8 bits (112), Expect = 1e-05
Identities = 54/208 (25%), Positives = 75/208 (36%), Gaps = 39/208 (18%)
Query: 13 ESAPRS-RSPAHGPARTRASSP--PQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
E AP + + PA P T+ SP P+E A T+S P + P + ++PSP
Sbjct: 497 EPAPTTPKEPA--PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSP 554
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP---------DPRPP 120
TT K T P P T + A T P + P+ AP P+ P
Sbjct: 555 TTTKE-----PAPTTPKEPAP-TTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 608
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPL------------VSPTTAHHPL-RLPEEPP 167
P P++ P T + T P L P ++PTT P PEEP
Sbjct: 609 APTTPKETAP---TTPKKLTPTTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPA 665
Query: 168 SHWRSLRAGGGRGAPVQPLSVNRRSPTP 195
+ P +P + P P
Sbjct: 666 P---TTPKAAAPNTPKEPAPTTPKEPAP 690
Score = 45.8 bits (107), Expect = 5e-05
Identities = 46/191 (24%), Positives = 69/191 (36%), Gaps = 15/191 (7%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTT 71
E AP + + PA + A + +E A T+S P + P P +P ++P+PTT
Sbjct: 395 EPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPA-PTTP------KKPAPTT 447
Query: 72 FKSVFVVVTVHTEKLAP-HPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQLL 129
K P P T + A T P +AP++ AP P+ P P P++
Sbjct: 448 PKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 507
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPL-----RLPEEPPSHWRSLRAGGGRGAPVQ 184
P T + P +PTT P P P + P +
Sbjct: 508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 567
Query: 185 PLSVNRRSPTP 195
P + P P
Sbjct: 568 PAPTTPKKPAP 578
Score = 29.6 bits (65), Expect = 3.8
Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 17/160 (10%)
Query: 13 ESAPRS-RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNS--QQPSP 69
E AP + + PA + A + P+E A + P +P L + ++P+P
Sbjct: 583 EPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAP 642
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPD-PRPPEPRPPQQL 128
TT + + T P P T A T A + P+ AP P+ P P P++
Sbjct: 643 TTPEEL-----APTTPEEPTPT-TPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Query: 129 LPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
P T + +PTT P + P+
Sbjct: 697 APTTPKETAPTTPKG-------TAPTTLKEPAPTTPKKPA 729
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.8 bits (112), Expect = 1e-05
Identities = 65/261 (24%), Positives = 86/261 (32%), Gaps = 47/261 (18%)
Query: 10 GRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
G +S P+ P P + + PPQ+ + +P + P P QQP P
Sbjct: 50 GPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQ----QPPPHQPPPHPQP----HQQQQPPP 101
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLL 129
S VV P P A A+++AP + P AP P P P
Sbjct: 102 PPQDSSKPVVAQ-----GPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPP-- 154
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVN 189
PA+ + A P G +P A P P P + G G G P
Sbjct: 155 PAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGP------- 207
Query: 190 RRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPG 249
+ PGG + G G G + GG+ P PP GG P G
Sbjct: 208 KGGKMPGGPKPGGGPGLSTPGGH--PKPPHR------------------GGGEPRGGRQH 247
Query: 250 APGARASRHRGSGSNHSPPAG 270
P H+G PP G
Sbjct: 248 HPPYHQQHHQG-----PPPGG 263
>gi|134142824 forkhead box D2 [Homo sapiens]
Length = 495
Score = 47.4 bits (111), Expect = 2e-05
Identities = 55/188 (29%), Positives = 70/188 (37%), Gaps = 42/188 (22%)
Query: 88 PHPQITQRGAAAATAAAP-EDSAP--RRFAPDPRPPE----------PRPPQQLLPAIGT 134
PHP AAA AAAP + S P R AP P PP P P PA G+
Sbjct: 288 PHPHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPA----PASGS 343
Query: 135 RGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSPT 194
A P +LG + A + L PP+ AG G P L ++
Sbjct: 344 GPGPGPAGLPAFLGAELGCAKAFYAASL--SPPA------AGTAAGLPTALLRQGLKTDA 395
Query: 195 PGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAPGAR 254
GG GGG +F ++ ++G GGGGA P G G+PG
Sbjct: 396 GGGA----------GGGGAGAGQRPSFSIDH-------IMGHGGGGAAPPGAGEGSPGPP 438
Query: 255 ASRHRGSG 262
+ G G
Sbjct: 439 FAAAAGPG 446
Score = 35.4 bits (80), Expect = 0.069
Identities = 65/208 (31%), Positives = 76/208 (36%), Gaps = 43/208 (20%)
Query: 88 PHPQITQRGAAAAT----AAAPEDSA------------PRRFAPDPRP-PEPRPPQQLLP 130
PHP++ RG AAA A P +A P AP P P P P P
Sbjct: 237 PHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPHPHPHAFA 296
Query: 131 AIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNR 190
AA A P L V P A P P PP+ S+ AG G P S +
Sbjct: 297 FA-----AAAAAAPCQLS--VPPGRAAAP---PPGPPT--ASVFAGAGSAPAPAPASGSG 344
Query: 191 RSPTPGGREA--GEGEGRTEGGGNIWPAPPRAFE--------VEQDLHCVAPVLGAGGGG 240
P P G A G G + +PP A + Q L A GAGGGG
Sbjct: 345 PGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGG-GAGGGG 403
Query: 241 ALPAGQLPGAPGARASRHRGSGSNHSPP 268
A AGQ P H G G+ +PP
Sbjct: 404 A-GAGQRPSFSIDHIMGHGGGGA--APP 428
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/114 (30%), Positives = 42/114 (36%), Gaps = 12/114 (10%)
Query: 101 TAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPL 160
TA AP AP P PR P RP LL +G G A + P LGP T
Sbjct: 16 TARAPSPGAP----PPPRSPRSRPLLLLLLLLGACGAAGRSPEPGRLGPHAQLT------ 65
Query: 161 RLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIW 214
R+P PP+ GGG + P+PG +G G W
Sbjct: 66 RVPRSPPA--GRAEPGGGEDRQARGTEPGAPGPSPGPAPGPGEDGAPAAGYRRW 117
Score = 29.6 bits (65), Expect = 3.8
Identities = 38/128 (29%), Positives = 47/128 (36%), Gaps = 26/128 (20%)
Query: 16 PRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSV 75
P S GP RA SP R+ RSRP ++ + A G S +P
Sbjct: 6 PSRASKGPGPT-ARAPSPGAPPPPRSPRSRPLLLLLLLLGAC-GAAGRSPEPG------- 56
Query: 76 FVVVTVHTEKLAPHPQITQ----RGAAAATAAAPEDSAPRRF---APDPRP-PEPRPPQQ 127
+L PH Q+T+ A A ED R AP P P P P P +
Sbjct: 57 ---------RLGPHAQLTRVPRSPPAGRAEPGGGEDRQARGTEPGAPGPSPGPAPGPGED 107
Query: 128 LLPAIGTR 135
PA G R
Sbjct: 108 GAPAAGYR 115
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 43.1 bits (100), Expect = 3e-04
Identities = 63/251 (25%), Positives = 85/251 (33%), Gaps = 39/251 (15%)
Query: 4 WARDAAGRSESAPRSRSPAHGP---ARTRASSPPQEGAER---------ATRSRPRVIRV 51
+ AA + S P S +G A+ + PPQ A+ +RP +
Sbjct: 602 FGHQAAAAAPSQPLSSIDGYGSSMVAQPQPQPPPQPSLSSCRHYMPPPYASLTRPLHHQA 661
Query: 52 PGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPR 111
CP S G QP P + VH A H QI+ + A P
Sbjct: 662 SACPHSHGNPPPQTQPPPQV--DYVIPHPVH----AFHSQISSHATSHPVAPPPPTHLAS 715
Query: 112 RFAPDPR--PPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAH---HPLRLPEEP 166
AP P+ PP +P +PA A HPH + + HP R E P
Sbjct: 716 TAAPIPQHLPPTHQPISHHIPATAP---PAQRLHPHEVMQRMEVQRRRMMQHPTRAHERP 772
Query: 167 PSHWRSLRAGGGRG----APVQPLSVNRRSPTPGGREAGEGEGRTEG---GGNIWP---- 215
P H + G G P S R++P E G G T G + P
Sbjct: 773 PPHPHRMHPNYGHGHHIHVPQTMSSHPRQAPERSAWELGIEAGVTAATYTPGALHPHLAH 832
Query: 216 --APPRAFEVE 224
APPR ++
Sbjct: 833 YHAPPRLHHLQ 843
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 43.1 bits (100), Expect = 3e-04
Identities = 44/178 (24%), Positives = 58/178 (32%), Gaps = 14/178 (7%)
Query: 91 QITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPL 150
Q +++A AAA E S+P+ + P P PP++ LP T +H
Sbjct: 244 QFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDT-----VIKH------Y 292
Query: 151 VSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGG 210
P +A P P PP+H G P N GG E G G
Sbjct: 293 QRPASAQPP---PPPPPAHALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKA 349
Query: 211 GNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSNHSPP 268
G + G GGGG P Q PG + +G PP
Sbjct: 350 GPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSPGYKTGKGGYGAAAGGATRPP 407
Score = 33.9 bits (76), Expect = 0.20
Identities = 67/285 (23%), Positives = 88/285 (30%), Gaps = 72/285 (25%)
Query: 8 AAGRSESAPRSRSPAHGPARTRASSPPQEGA--ERATRSRPRVIRVPGCPASPGYLRNSQ 65
A + A +SP P +++ P G E P V+ P P L ++
Sbjct: 751 AGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAP 810
Query: 66 QPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPP 125
PSP+ K V VH L P A D AP+ P P PP P P
Sbjct: 811 SPSPSASK-----VGVHL--LEP---------------ATRDGAPQPPPPPPPPPPPMPL 848
Query: 126 QQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE---PPSHWRSLRAGGGRGAP 182
Q H L P A P PEE PP + L
Sbjct: 849 Q-----------LEAHLRSHGLEP-----AAPSPRLRPEESLDPPGAMQELLGA------ 886
Query: 183 VQPLSVNRRSPTPGGREAG--EGEGRTEGGGNIWPAP----------------PRAFEVE 224
++PL P PG G EG+ G P+P P + +
Sbjct: 887 LEPL-----PPAPGDTGVGPPNSEGKDPAGAYRSPSPQGTKAPRFVPLTSICFPDSLLQD 941
Query: 225 QDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSNHSPPA 269
++ + GGGA G P G+G PPA
Sbjct: 942 EERSFFPTMEEMFGGGAADDYGKAGPPEDEGDPKAGAGPPPGPPA 986
Score = 30.4 bits (67), Expect = 2.2
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 15/64 (23%)
Query: 105 PEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPT-TAHHPLRLP 163
P + P P P+PP P PP Q PA+ + PLV+PT ++ P LP
Sbjct: 1457 PPPTPPPAPTPQPQPPPPPPPPQ--PALPSP------------PPLVAPTPSSPPPPPLP 1502
Query: 164 EEPP 167
PP
Sbjct: 1503 PPPP 1506
Score = 29.3 bits (64), Expect = 5.0
Identities = 22/77 (28%), Positives = 26/77 (33%), Gaps = 11/77 (14%)
Query: 192 SPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAP 251
SP G G G GGG P+ H + P+ G P PGAP
Sbjct: 538 SPALSGHGGGWGPSSLGGGGEASPS-----------HIIRPLQSPPATGRPPGVGSPGAP 586
Query: 252 GARASRHRGSGSNHSPP 268
G S S +PP
Sbjct: 587 GKYLSSVLASAPFLAPP 603
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 42.7 bits (99), Expect = 4e-04
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 28/187 (14%)
Query: 13 ESAPRS--RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPT 70
ESAPR+ A +R AS PP G R R+ P PG +SPG + +P P
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPPASG--RGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 71 TFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLP 130
K + +++ + + A A + + RR P P P P
Sbjct: 130 GQKGL---------RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS------P 174
Query: 131 AIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNR 190
A+ R RAA +G L P + P R P E P R + + +P R
Sbjct: 175 AMARRSRAAGTE----VG-LPRPAPSARP-RPPTEGP---RKSVSSASEHSTTEPSPAAR 225
Query: 191 RSPTPGG 197
R P+ GG
Sbjct: 226 RRPSAGG 232
Score = 42.7 bits (99), Expect = 4e-04
Identities = 77/286 (26%), Positives = 99/286 (34%), Gaps = 69/286 (24%)
Query: 16 PRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPAS-PGYLRNSQQP-SPTTFK 73
P++ P P A PPQ AT P + +P PAS PG Q P SP+
Sbjct: 499 PQAPPPLAAPPLQLAKPPPQAPPALAT---PPLQALPSPPASFPG-----QAPFSPSASL 550
Query: 74 SVFVVVTVHTEK----LAPHPQITQRGAAAATAAAPED----------SAPR---RFAPD 116
+ + T + AP Q+ A+ T AP S PR AP
Sbjct: 551 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 610
Query: 117 PRPPEPRPPQQLLPAIGTRGRAATARH-PHWL-----GPLVSPTTAHHP-LRLPEEPPSH 169
P PP R P L G +++A P L GP + P L P+
Sbjct: 611 PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 670
Query: 170 WRSLRAG--GGRGAPVQPLSVNRRSPTPGGREAGEGEG-----RTEGGGNIWPAPPRAFE 222
W A RGAP PL P P G +G TEG + PAP
Sbjct: 671 WSRGPAPPLAFRGAPGAPL------PWPPATGPGSADGLCTIYETEGPESATPAP----- 719
Query: 223 VEQDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSNHSPP 268
GAL G PG G +A+ G+G++ P
Sbjct: 720 -----------------GALDPGPSPGTSGGKAAAGAGAGASSRSP 748
Score = 37.4 bits (85), Expect = 0.018
Identities = 61/242 (25%), Positives = 86/242 (35%), Gaps = 50/242 (20%)
Query: 8 AAGRSESAPRSRSPAHGPART--RASSPPQEG---------AERATRSRPRVIRVPGCPA 56
A+GR E AP +++ + GP + RAS + G + T +R + P A
Sbjct: 96 ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSA 155
Query: 57 -SPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP 115
S G R++ P+P T P P + +R AA T AP +
Sbjct: 156 LSAGARRDTSGPTPGT----------------PSPAMARRSRAAGTEVGLPRPAP---SA 196
Query: 116 DPRPPEPRPPQQLLPA---IGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRS 172
PRPP P + + A T A R P G L P A L P S
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP--ASRSLSSSATPLS--SP 252
Query: 173 LRAG-GGRGAPVQPLSVNRRSP-----------TPGGREAGEGEGRTEGGGNIWPAPPRA 220
R+G RG P P ++ P TP ++A G P+P A
Sbjct: 253 ARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAA 312
Query: 221 FE 222
+
Sbjct: 313 LQ 314
Score = 37.0 bits (84), Expect = 0.024
Identities = 52/192 (27%), Positives = 63/192 (32%), Gaps = 26/192 (13%)
Query: 95 RGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI-------GTRGRAATARHPHWL 147
+ A A A P AP P P P PRPP + PA G GR A +
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRP-PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 148 GPLVSPTTAHH--PLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEG 205
G P +A P R + S GRG P SP P G G
Sbjct: 66 GGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPP--AKNTSPGPVS-SPGRASG 122
Query: 206 RTEGGGNIWPAPPRAFEVEQDLHCV------APVLGAGGGGAL--PAGQLPGAPG-ARAS 256
T G P + + + AP A GA +G PG P A A
Sbjct: 123 TTRPG----PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR 178
Query: 257 RHRGSGSNHSPP 268
R R +G+ P
Sbjct: 179 RSRAAGTEVGLP 190
Score = 35.0 bits (79), Expect = 0.090
Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 19/170 (11%)
Query: 1 MCTWARDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGY 60
+ T + AA +S++ P + H + T + P A + + P + +P PA+P
Sbjct: 304 LATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPPS 363
Query: 61 LRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDP--R 118
+ SPT T P P + + A P AP A P
Sbjct: 364 QATTSLGSPT---------LQATHSFLPSPPL-------SPLATPPPQAPPALALPPLQA 407
Query: 119 PPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
PP P L P +A A H L SP + P++ P PP+
Sbjct: 408 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPS-PPVQAPFSPPA 456
Score = 32.3 bits (72), Expect = 0.59
Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 25 PARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTE 84
P A+ PPQ A P + P PASP L PSP ++ V +
Sbjct: 385 PLSPLATPPPQAPPALAL---PPLQAPPSPPASPP-LSPLATPSPQAPNALAVHLLQAPF 440
Query: 85 KLAPHPQITQRGAAAAT-----AAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAA 139
P P + + A+ +A P AP A P P PP + +
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP-------ASPPMSP 493
Query: 140 TARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSP 193
+A P P P A PL+L + PP +L + P P S ++P
Sbjct: 494 SATPP----PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 543
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 42.7 bits (99), Expect = 4e-04
Identities = 51/187 (27%), Positives = 72/187 (38%), Gaps = 28/187 (14%)
Query: 13 ESAPRS--RSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPT 70
ESAPR+ A +R AS PP G R R+ P PG +SPG + +P P
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPPASG--RGERAPPAKNTSPGPVSSPGRASGTTRPGPL 129
Query: 71 TFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLP 130
K + +++ + + A A + + RR P P P P
Sbjct: 130 GQKGL---------RISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPS------P 174
Query: 131 AIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNR 190
A+ R RAA +G L P + P R P E P R + + +P R
Sbjct: 175 AMARRSRAAGTE----VG-LPRPAPSARP-RPPTEGP---RKSVSSASEHSTTEPSPAAR 225
Query: 191 RSPTPGG 197
R P+ GG
Sbjct: 226 RRPSAGG 232
Score = 41.6 bits (96), Expect = 0.001
Identities = 77/281 (27%), Positives = 97/281 (34%), Gaps = 69/281 (24%)
Query: 21 PAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPAS-PGYLRNSQQP-SPTTFKSVFVV 78
PA P A PPQ AT P + +P PAS PG Q P SP+ + +
Sbjct: 773 PASLPMSPLAKPPPQAPPALAT---PPLQALPSPPASFPG-----QAPFSPSASLPMSPL 824
Query: 79 VTVHTEK----LAPHPQITQRGAAAATAAAPED----------SAPR---RFAPDPRPPE 121
T + AP Q+ A+ T AP S PR AP P PP
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 884
Query: 122 PRPPQQLLPAIGTRGRAATARH-PHWL-----GPLVSPTTAHHP-LRLPEEPPSHWRSLR 174
R P L G +++A P L GP + P L P+ W
Sbjct: 885 SRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGP 944
Query: 175 AG--GGRGAPVQPLSVNRRSPTPGGREAGEGEG-----RTEGGGNIWPAPPRAFEVEQDL 227
A RGAP PL P P G +G TEG + PAP
Sbjct: 945 APPLAFRGAPGAPL------PWPPATGPGSADGLCTIYETEGPESATPAP---------- 988
Query: 228 HCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSNHSPP 268
GAL G PG G +A+ G+G++ P
Sbjct: 989 ------------GALDPGPSPGTSGGKAAAGAGAGASSRSP 1017
Score = 37.0 bits (84), Expect = 0.024
Identities = 52/192 (27%), Positives = 63/192 (32%), Gaps = 26/192 (13%)
Query: 95 RGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI-------GTRGRAATARHPHWL 147
+ A A A P AP P P P PRPP + PA G GR A +
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRP-PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 148 GPLVSPTTAHH--PLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEG 205
G P +A P R + S GRG P SP P G G
Sbjct: 66 GGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPP--AKNTSPGPVS-SPGRASG 122
Query: 206 RTEGGGNIWPAPPRAFEVEQDLHCV------APVLGAGGGGAL--PAGQLPGAPG-ARAS 256
T G P + + + AP A GA +G PG P A A
Sbjct: 123 TTRPG----PLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMAR 178
Query: 257 RHRGSGSNHSPP 268
R R +G+ P
Sbjct: 179 RSRAAGTEVGLP 190
Score = 37.0 bits (84), Expect = 0.024
Identities = 57/209 (27%), Positives = 78/209 (37%), Gaps = 41/209 (19%)
Query: 8 AAGRSESAPRSRSPAHGPART--RASSPPQEG---------AERATRSRPRVIRVPGCPA 56
A+GR E AP +++ + GP + RAS + G + T +R + P A
Sbjct: 96 ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSA 155
Query: 57 -SPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP 115
S G R++ P+P T P P + +R AA T AP +
Sbjct: 156 LSAGARRDTSGPTPGT----------------PSPAMARRSRAAGTEVGLPRPAP---SA 196
Query: 116 DPRPPEPRPPQQLLPA---IGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRS 172
PRPP P + + A T A R P G L P A L P S
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP--ASRSLSSSATPLS--SP 252
Query: 173 LRAG-GGRGAPVQPLSVNRRSPTPGGREA 200
R+G RG P P + P P G +A
Sbjct: 253 ARSGPSARGTPRAP--AHPSQPKPKGLQA 279
Score = 35.0 bits (79), Expect = 0.090
Identities = 53/214 (24%), Positives = 75/214 (35%), Gaps = 25/214 (11%)
Query: 20 SPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVV 79
SP P + +++PP + + + P + P PASP PS T +
Sbjct: 678 SPPASPPVSPSATPPSQAPP--SLAAPPLQVPPSPPASP-----PMSPSATPPPQAPPPL 730
Query: 80 TVHTEKLAPHPQITQRGAAAAT---------AAAPEDSAPRRFAPDPRPPEPRPPQQLLP 130
++ P P + + +AT AA P P A P P +PP Q P
Sbjct: 731 AAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPP 790
Query: 131 AIGTRGRAATARHP-HWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQP---- 185
A+ T A P + G +A P+ PP + A P P
Sbjct: 791 ALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP 850
Query: 186 -LSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPP 218
L RR PTPG + G T + P PP
Sbjct: 851 TLQAPRRPPTPGPDTSVSGPRLTLA---LAPGPP 881
Score = 33.1 bits (74), Expect = 0.34
Identities = 60/205 (29%), Positives = 79/205 (38%), Gaps = 38/205 (18%)
Query: 6 RDAAGRSESAPRSRS------PAHGPART--------RASSPPQEGAERATRS-RPRVIR 50
R +AG P SRS P PAR+ RA + P + + ++ RP +
Sbjct: 227 RPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVT 286
Query: 51 VPGCPASP--GYLRNSQ--QPSPTTFKSVFV-----VVTVHTEKLAPHPQITQRGAAAAT 101
P A+P G L +S PSP+ K+ V T L P P + A
Sbjct: 287 PPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPL----ATPLP 342
Query: 102 AAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLR 161
A P SAP P PP PP Q P++ T A P L + P H L
Sbjct: 343 LAPPSPSAPPSLQTLPSPPA-TPPSQAPPSMTTPPMQA----PPSL-QTIPPIQVPHSLT 396
Query: 162 LP--EEPPS--HWRSLRAGGGRGAP 182
P + PPS SL+A G+P
Sbjct: 397 SPSLQAPPSPLALSSLQATTSLGSP 421
Score = 30.8 bits (68), Expect = 1.7
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 19/161 (11%)
Query: 9 AGRSESAPRSRSPAHGPARTRAS-SPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQP 67
A S AP S S P T++S +PP A+ + P + +P P L+ + P
Sbjct: 496 ASHSPQAPLS-SLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPP--LQTASAP 552
Query: 68 SPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQ 127
T + P P T ++ A P AP A P P PP
Sbjct: 553 LTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLS 612
Query: 128 LLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
L A P P P A PL+ P PP+
Sbjct: 613 PL-----------ATPP----PQAPPXLALPPLQAPPSPPA 638
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 42.7 bits (99), Expect = 4e-04
Identities = 77/286 (26%), Positives = 99/286 (34%), Gaps = 69/286 (24%)
Query: 16 PRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPAS-PGYLRNSQQP-SPTTFK 73
P++ P P A PPQ AT P + +P PAS PG Q P SP+
Sbjct: 460 PQAPPPLAAPPLQLAKPPPQAPPALAT---PPLQALPSPPASFPG-----QAPFSPSASL 511
Query: 74 SVFVVVTVHTEK----LAPHPQITQRGAAAATAAAPED----------SAPR---RFAPD 116
+ + T + AP Q+ A+ T AP S PR AP
Sbjct: 512 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPG 571
Query: 117 PRPPEPRPPQQLLPAIGTRGRAATARH-PHWL-----GPLVSPTTAHHP-LRLPEEPPSH 169
P PP R P L G +++A P L GP + P L P+
Sbjct: 572 PPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA 631
Query: 170 WRSLRAG--GGRGAPVQPLSVNRRSPTPGGREAGEGEG-----RTEGGGNIWPAPPRAFE 222
W A RGAP PL P P G +G TEG + PAP
Sbjct: 632 WSRGPAPPLAFRGAPGAPL------PWPPATGPGSADGLCTIYETEGPESATPAP----- 680
Query: 223 VEQDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSNHSPP 268
GAL G PG G +A+ G+G++ P
Sbjct: 681 -----------------GALDPGPSPGTSGGKAAAGAGAGASSRSP 709
Score = 39.3 bits (90), Expect = 0.005
Identities = 72/280 (25%), Positives = 100/280 (35%), Gaps = 60/280 (21%)
Query: 8 AAGRSESAPRSRSPAHGPART--RASSPPQEG---------AERATRSRPRVIRVPGCPA 56
A+GR E AP +++ + GP + RAS + G + T +R + P A
Sbjct: 87 ASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSA 146
Query: 57 -SPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAP 115
S G R++ P+P T P P + +R AA T AP +
Sbjct: 147 LSAGARRDTSGPTPGT----------------PSPAMARRSRAAGTEVGLPRPAP---SA 187
Query: 116 DPRPPEPRPPQQLLPA---IGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRS 172
PRPP P + + A T A R P G L P A L P S
Sbjct: 188 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRP--ASRSLSSSATPLS--SP 243
Query: 173 LRAG-GGRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVA 231
R+G RG P P + P P G +A PP+ +D A
Sbjct: 244 ARSGPSARGTPRAP--AHPSQPKPKGLQA--------------LRPPQVTPPRKD---AA 284
Query: 232 PVLG--AGGGGALPAGQLPGAPGARASRHRGSGSNHSPPA 269
P LG + A P+ P +P A S +PP+
Sbjct: 285 PALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPS 324
Score = 38.1 bits (87), Expect = 0.011
Identities = 53/190 (27%), Positives = 67/190 (35%), Gaps = 31/190 (16%)
Query: 95 RGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI-------GTRGRAATARHPHWL 147
+ A A A P AP P P P PRPP + PA G GR A +
Sbjct: 7 KAKAGAAARTPAARAPGLLTPRP-PGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGI 65
Query: 148 GPLVSPTTAHH--PLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRS-----PTPGGREA 200
G P +A P R PP+ R RA + P+S R+ P P G++
Sbjct: 66 GGATIPESAPRAGPTR-TSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKG 124
Query: 201 GE-GEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAPG-ARASRH 258
T G AP R+ L AG +G PG P A A R
Sbjct: 125 LRISAEETVARGKATEAPKRS------------ALSAGARRD-TSGPTPGTPSPAMARRS 171
Query: 259 RGSGSNHSPP 268
R +G+ P
Sbjct: 172 RAAGTEVGLP 181
Score = 35.8 bits (81), Expect = 0.053
Identities = 51/187 (27%), Positives = 64/187 (34%), Gaps = 54/187 (28%)
Query: 6 RDAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQ 65
R +AG P SRS + + T SSP RS P P PA P
Sbjct: 218 RPSAGGGLQRPASRSLSS--SATPLSSP--------ARSGPSARGTPRAPAHPS------ 261
Query: 66 QPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPR-- 123
QP P ++ L P PQ+T AA A P S+P PP P
Sbjct: 262 QPKPKGLQA-----------LRP-PQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAP 309
Query: 124 ------------PPQQLLPAIGTRGRAATARHPHWLGPLVS----------PTTAHHPLR 161
PP Q ++G+ AT H P +S P A PL+
Sbjct: 310 PSLQTLPSPPATPPSQATTSLGSPTLQAT--HSFLPSPPLSPLATPPPQAPPALALPPLQ 367
Query: 162 LPEEPPS 168
P PP+
Sbjct: 368 APPSPPA 374
Score = 32.3 bits (72), Expect = 0.59
Identities = 44/174 (25%), Positives = 62/174 (35%), Gaps = 20/174 (11%)
Query: 25 PARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSVFVVVTVHTE 84
P A+ PPQ A P + P PASP L PSP ++ V +
Sbjct: 346 PLSPLATPPPQAPPALAL---PPLQAPPSPPASPP-LSPLATPSPQAPNALAVHLLQAPF 401
Query: 85 KLAPHPQITQRGAAAAT-----AAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAA 139
P P + + A+ +A P AP A P P PP + +
Sbjct: 402 SPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP-------ASPPMSP 454
Query: 140 TARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSVNRRSP 193
+A P P P A PL+L + PP +L + P P S ++P
Sbjct: 455 SATPP----PQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAP 504
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
Length = 1747
Score = 42.4 bits (98), Expect = 6e-04
Identities = 56/193 (29%), Positives = 70/193 (36%), Gaps = 20/193 (10%)
Query: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPE-----PRPPQQLLPAIGTRGRAATAR 142
P Q R +APE R P PPE PRPP P +A+
Sbjct: 899 PERQKRARSMIILQDSAPESGDAPRPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLF 958
Query: 143 HPHWLGPLVSPTTAHHPL--RLPEEPPSHWRSLRAGG---GRGAPVQPLSVNRRSPTPGG 197
P P PL +L E +L G G G+ + S R P PGG
Sbjct: 959 APS------KPQRRKSPLVKQLQVEDAQERAALAVGSPGPGGGSFAREPSPTHRGPRPGG 1012
Query: 198 REAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAPGARASR 257
+ G G+G G PA R E E+ V +GA G A P LP +R+
Sbjct: 1013 LDYGAGDGPGLAFGGPGPAKDRRLE-ERRRSTVFLSVGAIEGSA-PGADLPSLQPSRSID 1070
Query: 258 HRGSGSNHSPPAG 270
R G+ P AG
Sbjct: 1071 ERLLGT--GPTAG 1081
>gi|37693995 Kruppel-like factor 13 [Homo sapiens]
Length = 288
Score = 42.0 bits (97), Expect = 7e-04
Identities = 47/163 (28%), Positives = 58/163 (35%), Gaps = 28/163 (17%)
Query: 18 SRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSVFV 77
SR+ HGP R S P+ A AT + PRV R + S + F +
Sbjct: 20 SRAVVHGP-REGPESRPEGAAVAATPTLPRVEE-----------RRDGKDSASLFVVARI 67
Query: 78 VVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGR 137
+ ++ + AP P + GAAA A P P P P P P G G
Sbjct: 68 LADLNQQAPAPAPAERREGAAARKARTPCRLPP----PAPEPTSP----------GAEGA 113
Query: 138 AATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRG 180
AA P W P P P R P S LR RG
Sbjct: 114 AAAPPSPAWSEP--EPEAGLEPEREPGPAGSGEPGLRQRVRRG 154
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 41.6 bits (96), Expect = 0.001
Identities = 54/214 (25%), Positives = 83/214 (38%), Gaps = 22/214 (10%)
Query: 11 RSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPT 70
+ ++ PRSRS + +RTR+ SP R RSR R P SP R P
Sbjct: 271 KEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYS-PRRRPSP---RRRPSPRRR 326
Query: 71 TFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPE-----PRPP 125
T H +P + +R +A+ + ++ S+ R +P +PP+ PR
Sbjct: 327 TPPRRMPPPPRHRRSRSP-VRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKT 385
Query: 126 QQLLPAIGTRGRAATARHPHWLGPLVS--PTTAHHPLRLPEEPPSHWR-SLRAGGGRGAP 182
++L P+ A+ R H P + P T H P R S+ G G
Sbjct: 386 RRLSPS------ASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKV 439
Query: 183 VQPLSVNRR---SPTPGGREAGEGEGRTEGGGNI 213
+ +R SP P R+ E + GG +
Sbjct: 440 TKHKGTEKRESPSPAPKPRKVELSESEEDKGGKM 473
Score = 37.7 bits (86), Expect = 0.014
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 23/170 (13%)
Query: 11 RSESAPRSRSPAHGPARTRASSP-PQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
+ S RS A P + SP P+ A + + S P V R G +SP + Q PSP
Sbjct: 662 KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRR--GASSSP---QRRQSPSP 716
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLL 129
+T + P P+ ++ A+ + + S+ R + P P +PP
Sbjct: 717 STRP-------IRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPS 769
Query: 130 PAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGR 179
P + + +W P V A P P P + S + GGG+
Sbjct: 770 PV------QSQSPSTNW-SPAVPVKKAKSPTPSPSPPRN---SDQEGGGK 809
Score = 35.0 bits (79), Expect = 0.090
Identities = 49/206 (23%), Positives = 69/206 (33%), Gaps = 21/206 (10%)
Query: 10 GRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
GR SRS + P + + + P+ R+ P R PA P R + P P
Sbjct: 518 GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPP 577
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQRGAAA----ATAAAPEDSAPRRFAPDPRPP----- 120
P I +R + + A+P RR +P P P
Sbjct: 578 RRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
Query: 121 EPRPPQQLLPAIGTRGRAATARHPHWLGPLVS--------PTTAHHPLRLPEEPPSHWRS 172
P P Q+ P R + +++H P S P H P P P + S
Sbjct: 638 SPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQT--SS 695
Query: 173 LRAGGGRGAPVQPLSVNRRSPTPGGR 198
RGA P R+SP+P R
Sbjct: 696 SPPPVRRGASSSP--QRRQSPSPSTR 719
Score = 35.0 bits (79), Expect = 0.090
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 25/203 (12%)
Query: 16 PRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSPTTFKSV 75
PR R P R R SPP + R I+ P+ P R + P P ++
Sbjct: 567 PRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 626
Query: 76 FVVVTVHTEKLAPHPQ-----ITQRGAAAATAAAPEDSAPRRF---APDPRP-------P 120
+P P+ +T+R + + ++ + S+P R A P+P P
Sbjct: 627 PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSP 686
Query: 121 EPRPPQ-QLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGR 179
PR PQ P RG +++ + SP+ + P+R P + +A
Sbjct: 687 RPRAPQTSSSPPPVRRGASSSPQRRQ------SPSPSTRPIRRVSRTPEPKKIKKAASPS 740
Query: 180 GAPVQPLSVNRR---SPTPGGRE 199
V+ +S +R SP P ++
Sbjct: 741 PQSVRRVSSSRSVSGSPEPAAKK 763
Score = 32.3 bits (72), Expect = 0.59
Identities = 54/212 (25%), Positives = 74/212 (34%), Gaps = 43/212 (20%)
Query: 13 ESAPRSRSP----AHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPS 68
E RSRSP + P+ R SSP + +R + SR SP + S+ PS
Sbjct: 164 EKRERSRSPRRRKSRSPSPRRRSSPVRRERKR-SHSR-----------SPRHRTKSRSPS 211
Query: 69 PTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRP-PEPRPPQQ 127
P K T +L P P + + + A + D P P P PEP+ P
Sbjct: 212 PAPEKK------EKTPEL-PEPSVKVKEPSVQEATSTSDILK---VPKPEPIPEPKEPSP 261
Query: 128 LLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLS 187
+ + + T S + + R PSH R R R P
Sbjct: 262 EKNSKKEKEKEKTRPR--------SRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSP-- 311
Query: 188 VNRRSPTPGGREAGEGEGRTEGGGNIWPAPPR 219
RR P+P R + R P PPR
Sbjct: 312 --RRRPSPRRRPS----PRRRTPPRRMPPPPR 337
>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
Length = 348
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/216 (26%), Positives = 79/216 (36%), Gaps = 48/216 (22%)
Query: 85 KLAPH--PQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAIGTRGRAATAR 142
+LA H P+ + R + ++ + S P PP RPP L A+ R R
Sbjct: 78 RLAGHFDPECSTRSSRTDSSGKGQSS----LRASPGPPRRRPPS-LRSAVPRIPRLRPER 132
Query: 143 HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGG-----GRGAPVQPLSVNRRSPT--- 194
+ + P V P T P W GG R +P SPT
Sbjct: 133 Y-QLVAPRVLPRT-----------PQRWTRRGVGGRLPQAARSSPRGSKLSGAASPTAIF 180
Query: 195 PGGREAGEGEGRTEGGGNI----WPAPPRAFEVEQDLHCVAPVLGAGGGGALPAGQLPGA 250
PG R +G G G GGG+ W + F + C+A + P +LP A
Sbjct: 181 PGTRGSGRGGGCNCGGGSCSCCRW-SMAGPFPCARRATCLASL--------SPPPKLPTA 231
Query: 251 PGARASRHRGSGSNH--------SPPAGCFLRLFFC 278
PG RA+ + ++ SPP C L FC
Sbjct: 232 PGPRAAAAAATATSSIQYPRIPLSPPTNCGLSAPFC 267
>gi|239754611 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 41.2 bits (95), Expect = 0.001
Identities = 42/135 (31%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI------GTRGRAATA 141
P PQ +T + + P P P + R ++L AI G GR A
Sbjct: 33 PRPQ----PVVVSTPCSVQCHTPELERGGPGPTDRRTSRRLRAAIVAAASPGLHGRPAAC 88
Query: 142 R-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG-RGAPVQPL---SVNRRSPTPG 196
R HP PT A P PE P R+ R G RGAP + NR P G
Sbjct: 89 RGHPR-------PTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQG 141
Query: 197 GREAGEGEGRTEGGG 211
E G G G + GG
Sbjct: 142 QEEDGGGCGGRDSGG 156
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 41.2 bits (95), Expect = 0.001
Identities = 64/281 (22%), Positives = 94/281 (33%), Gaps = 35/281 (12%)
Query: 4 WARDAAG--RSESAPRSRSPAHG----------PARTRASSPPQEGAERATRSRPRVIRV 51
W D G R SA R HG P R A ++ R +
Sbjct: 3629 WPHDEGGPGRHASAKEHRHGDHGRHSGRHTGEEPGRRAAKPHARDLGRHEARPHSQPSSA 3688
Query: 52 PGCP--ASPGYLRNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSA 109
P P PGY +++ P+ S + H + G AA + A +
Sbjct: 3689 PAMPKKGQPGYPSSAEYSQPSRASSAYH----HASDSKKGSRQAHSGPAALQSKAEPQAQ 3744
Query: 110 P----RRFAPDPRPPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEE 165
P R+ AP P+ + P + +P+ + T + LG L P A RL ++
Sbjct: 3745 PQLQGRQAAPGPQQSQS-PSSRQIPSGAASRQPQTQQQQQGLG-LQPPQQALTQARLQQQ 3802
Query: 166 --PPSHWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEV 223
P + + A G P QP P P G E ++G P RA +
Sbjct: 3803 SQPTTRGSAPAASQPAGKP-QPGPSTATGPQPAGPPRAEQTNGSKGTAKA-PQQGRAPQA 3860
Query: 224 EQDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRGSGSN 264
+ P G G G + G PGA A + G +
Sbjct: 3861 Q-------PAPGPGPAGVKAGARPGGTPGAPAGQPGADGES 3894
Score = 30.4 bits (67), Expect = 2.2
Identities = 63/282 (22%), Positives = 97/282 (34%), Gaps = 56/282 (19%)
Query: 8 AAGRSESAPRSRSPAH-GPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQ 66
AA + + +P H P TRA P + A+ R+ R SP + +
Sbjct: 91 AASPTPKQASATTPGHESPRETRAQGPAGQEADGPRRTLQVDSRTQRSGRSPS-VSPDRG 149
Query: 67 PSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRR----------FAPD 116
+PT+ SV + + + L P I + +T + P + + F P+
Sbjct: 150 STPTSPYSVPQIAPLPSSTLCP---ICKTSDLTSTPSQPNFNTCTQCHNKVCNQCGFNPN 206
Query: 117 PRPPEPRP----PQQLLPAIG----TRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPS 168
P + + Q+ A+G T R+ + + H P +SP AH P + P P
Sbjct: 207 PHLTQVKEWLCLNCQMQRALGMDMTTAPRSKSQQQLH--SPALSP--AHSPAKQPLGKPD 262
Query: 169 HWRSLRAGGGRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGG----------GNIWPAPP 218
RS GG P PG R+A + G G + P PP
Sbjct: 263 QERSRGPGG---------------PQPGSRQAETARATSVPGPAQAAAPPEVGRVSPQPP 307
Query: 219 RAFEVEQDLHCVAPVLGAGGGGALPAGQLPGAPGARASRHRG 260
+ + P AG A A +P GA G
Sbjct: 308 QPTKPS----TAEPRPPAGEAPAKSATAVPAGLGATEQTQEG 345
Score = 30.4 bits (67), Expect = 2.2
Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 31/122 (25%)
Query: 2 CTWARDAAGRSESAPRSRS----------PAHGPA----------RTRASSPPQEGAERA 41
C R +APRS+S PAH PA R+R PQ G+ +A
Sbjct: 220 CQMQRALGMDMTTAPRSKSQQQLHSPALSPAHSPAKQPLGKPDQERSRGPGGPQPGSRQA 279
Query: 42 TRSRPRVIRVPGCPASPGYL-RNSQQPSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAA 100
+R + P A+P + R S QP T S P P + A +A
Sbjct: 280 ETARATSVPGPAQAAAPPEVGRVSPQPPQPTKPST----------AEPRPPAGEAPAKSA 329
Query: 101 TA 102
TA
Sbjct: 330 TA 331
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase
4 [Homo sapiens]
Length = 1039
Score = 41.2 bits (95), Expect = 0.001
Identities = 79/272 (29%), Positives = 98/272 (36%), Gaps = 78/272 (28%)
Query: 7 DAAGRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQ 66
D+ +E+AP P GP ++P Q GA A + PR P G R+S+
Sbjct: 445 DSLEPTEAAP----PRSGPQSPAPAAPAQPGATLAPPTPPR-------PRDGGTPRHSRA 493
Query: 67 PSPTTFKSVFVVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQ 126
S AA AA P R AP PRP +PP
Sbjct: 494 LS-----------------------------WAARAARPLPLFLGR-APPPRPAVEQPPP 523
Query: 127 QLLPAIGTRGRAATARHPHWLGPLVS-PTTAHHP-------LRLPEEPP-SHWRSLRAGG 177
++ G+ A+ R P P P HP LR P PP H R R GG
Sbjct: 524 KVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGR--RTGG 581
Query: 178 GRGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVA-PV--- 233
+ QP R T GGR EG+ RT G P A V+ +L A PV
Sbjct: 582 PQA--TQPRPPARAQATQGGR---EGQARTLG--------PAAPTVDSNLSSEARPVTSF 628
Query: 234 --LGAGGGGALPA-------GQLPGAPGARAS 256
L G LP G+ GAPG A+
Sbjct: 629 LSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAA 660
>gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo
sapiens]
Length = 178
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/135 (31%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI------GTRGRAATA 141
P PQ +T + + P P P + R ++L AI G GR A
Sbjct: 33 PRPQ----PVVVSTPCSVQCHTPELERGGPGPTDCRTSRRLRAAIVAAASPGLHGRPAAC 88
Query: 142 R-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG-RGAPVQPL---SVNRRSPTPG 196
R HP PT A P PE P R+ R G RGAP + NR P G
Sbjct: 89 RGHPR-------PTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQG 141
Query: 197 GREAGEGEGRTEGGG 211
E G G G + GG
Sbjct: 142 QEEDGGGCGGRDSGG 156
>gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo
sapiens]
Length = 178
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/135 (31%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI------GTRGRAATA 141
P PQ +T + + P P P + R ++L AI G GR A
Sbjct: 33 PRPQ----PVVVSTPCSVQCHTPELERGGPGPTDCRTSRRLRAAIVAAASPGLHGRPAAC 88
Query: 142 R-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG-RGAPVQPL---SVNRRSPTPG 196
R HP PT A P PE P R+ R G RGAP + NR P G
Sbjct: 89 RGHPR-------PTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQG 141
Query: 197 GREAGEGEGRTEGGG 211
E G G G + GG
Sbjct: 142 QEEDGGGCGGRDSGG 156
>gi|239508892 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 40.8 bits (94), Expect = 0.002
Identities = 42/135 (31%), Positives = 51/135 (37%), Gaps = 22/135 (16%)
Query: 88 PHPQITQRGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQLLPAI------GTRGRAATA 141
P PQ +T + + P P P + R ++L AI G GR A
Sbjct: 33 PRPQ----PVVVSTPCSVQCHTPELERGGPGPTDCRTSRRLRAAIVAAASPGLHGRPAAC 88
Query: 142 R-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG-RGAPVQPL---SVNRRSPTPG 196
R HP PT A P PE P R+ R G RGAP + NR P G
Sbjct: 89 RGHPR-------PTPARPPTGAPEAPALSGRAARLHGAQRGAPAGQARHGAGNRHPPRQG 141
Query: 197 GREAGEGEGRTEGGG 211
E G G G + GG
Sbjct: 142 QEEDGGGCGGRDSGG 156
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 40.8 bits (94), Expect = 0.002
Identities = 63/204 (30%), Positives = 82/204 (40%), Gaps = 36/204 (17%)
Query: 20 SPAHGPARTRASSPPQEGAERATRSR---PRVIRVPGCPASPGYLRNSQQPSPTTFKSVF 76
+PA PA A+ P + G ATRSR P +R+P A+ QQP+ + +
Sbjct: 1133 TPASEPA---AALPRKSGRAAATRSRIPRPIGLRMPMPVAA-------QQPASRSHGAAP 1182
Query: 77 VVVTVHTEKLAPHPQITQRGAAAATAAAPEDSAPRRFAPD-----PRPPEPRPPQQLLPA 131
+ T T +L T G+A A P+ R P RPP PR P+ LPA
Sbjct: 1183 ALDTAITSRLQLQ---TPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPR--LPA 1237
Query: 132 IGTRGRAATAR-HPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRA--------GGGRGAP 182
+ R A+A L SP+ +H R PP RA GG + P
Sbjct: 1238 STSAARNASASPRSQSLSRRESPSPSHQ-ARPGVPPPRGVPPARAQPDGTPSPGGSKKGP 1296
Query: 183 VQPLSVNRRSPTPGGREAGEGEGR 206
L R T GR AG EGR
Sbjct: 1297 RGKLQAQR--ATTKGR-AGGAEGR 1317
>gi|61743948 abl-interactor 1 isoform d [Homo sapiens]
Length = 476
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 21/148 (14%)
Query: 119 PPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG 178
PP +PP + GT GR +P P++ P P + S G
Sbjct: 171 PPTQKPPSPPMSGRGTLGRN-------------TPYKTLEPVKPPTVPNDYMTSPARLGS 217
Query: 179 RGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGG 238
+ +P + S+N+R T G G G G +I P A P +G
Sbjct: 218 QHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSI--GIPIAVPTPS-----PPTIGPAA 270
Query: 239 GGALPAGQLPGAPGARASRHRGSGSNHS 266
G+ P Q G + SRH + S+ S
Sbjct: 271 PGSAPGSQY-GTMTRQISRHNSTTSSTS 297
>gi|61743946 abl-interactor 1 isoform c [Homo sapiens]
Length = 452
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 21/148 (14%)
Query: 119 PPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG 178
PP +PP + GT GR +P P++ P P + S G
Sbjct: 176 PPTQKPPSPPMSGRGTLGRN-------------TPYKTLEPVKPPTVPNDYMTSPARLGS 222
Query: 179 RGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGG 238
+ +P + S+N+R T G G G G +I P A P +G
Sbjct: 223 QHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSI--GIPIAVPTPS-----PPTIGPAA 275
Query: 239 GGALPAGQLPGAPGARASRHRGSGSNHS 266
G+ P Q G + SRH + S+ S
Sbjct: 276 PGSAPGSQY-GTMTRQISRHNSTTSSTS 302
>gi|61743944 abl-interactor 1 isoform b [Homo sapiens]
Length = 481
Score = 40.8 bits (94), Expect = 0.002
Identities = 37/148 (25%), Positives = 54/148 (36%), Gaps = 21/148 (14%)
Query: 119 PPEPRPPQQLLPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGG 178
PP +PP + GT GR +P P++ P P + S G
Sbjct: 176 PPTQKPPSPPMSGRGTLGRN-------------TPYKTLEPVKPPTVPNDYMTSPARLGS 222
Query: 179 RGAPVQPLSVNRRSPTPGGREAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGG 238
+ +P + S+N+R T G G G G +I P A P +G
Sbjct: 223 QHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSI--GIPIAVPTPS-----PPTIGPAA 275
Query: 239 GGALPAGQLPGAPGARASRHRGSGSNHS 266
G+ P Q G + SRH + S+ S
Sbjct: 276 PGSAPGSQY-GTMTRQISRHNSTTSSTS 302
>gi|14249150 single stranded DNA binding protein 4 isoform a [Homo
sapiens]
Length = 385
Score = 40.4 bits (93), Expect = 0.002
Identities = 70/285 (24%), Positives = 91/285 (31%), Gaps = 39/285 (13%)
Query: 10 GRSESAPRSRSPAHGPARTRASSPPQEGAERATRSRPRVIRVPGCPASPGYLRNSQQPSP 69
G S +P GP SP G R T P G P S L + +PSP
Sbjct: 127 GSQPSPHNPNAPMMGPHGQPFMSPRFPGGPRPTLRMPSQPPA-GLPGSQPLLPGAMEPSP 185
Query: 70 TTFKSVFVVVTVHTEKLAPHPQITQ-RGAAAATAAAPEDSAPRRFAPDPRPPEPRPPQQL 128
H P ++T RG A+ P+ + RPP
Sbjct: 186 RA--------QGHPSMGGPMQRVTPPRGMASV--------GPQSYGGGMRPPPNSLAGPG 229
Query: 129 LPAIGTRGRAATARHPHWLGPLVSPTTAHHPLRLPEEPPSHWRSLRAGGGRGAPVQPLSV 188
LPA+ P GP SP+ P P S+ GG G P+ P
Sbjct: 230 LPAMNMG--------PGVRGPWASPSGNSIPYS-SSSPGSYTGPPGGGGPPGTPIMPSPG 280
Query: 189 NRRSPTPGG----REAGEGEGRTEGGGNIWPAPPRAFEVEQDLHCVAPVLGAGGGGALPA 244
+ + + G+G GR P P A + H V LG+G LP
Sbjct: 281 DSTNSSENMYTIMNPIGQGAGRANFPLGPGPEGPMAAMSAMEPHHVNGSLGSGDMDGLP- 339
Query: 245 GQLPGAPGARASRHRGSGS----NHSPPAGCFLRLFFCCCRDPGL 285
+PGA A G+ AG FL F PG+
Sbjct: 340 ---KSSPGAVAGLSNAPGTPRDDGEMAAAGTFLHPFPSESYSPGM 381
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,331,909
Number of Sequences: 37866
Number of extensions: 1279401
Number of successful extensions: 11644
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 919
Number of HSP's that attempted gapping in prelim test: 9261
Number of HSP's gapped (non-prelim): 2746
length of query: 324
length of database: 18,247,518
effective HSP length: 102
effective length of query: 222
effective length of database: 14,385,186
effective search space: 3193511292
effective search space used: 3193511292
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.