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Search of human proteins with 239744229
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens]
(904 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens] 1860 0.0
gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens] 1571 0.0
gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens] 1166 0.0
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.004
gi|42821110 hypothetical protein LOC340602 [Homo sapiens] 38 0.037
gi|91982772 mucin 17 [Homo sapiens] 38 0.049
gi|239754520 PREDICTED: similar to golgi autoantigen, golgin sub... 36 0.18
gi|239749081 PREDICTED: hypothetical protein XP_002346905 [Homo ... 36 0.18
gi|239508762 PREDICTED: similar to golgi autoantigen, golgin sub... 36 0.18
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 34 0.54
gi|224493723 hypothetical protein LOC100130311 [Homo sapiens] 34 0.70
gi|239743107 PREDICTED: hypothetical protein XP_002342738 [Homo ... 34 0.70
gi|27734915 hypothetical protein LOC170393 [Homo sapiens] 34 0.70
gi|41152076 steroid-sensitive protein 1 [Homo sapiens] 33 1.2
gi|41152074 steroid-sensitive protein 1 [Homo sapiens] 33 1.2
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 32 2.0
gi|223718207 ets variant gene 3 isoform 1 [Homo sapiens] 32 2.0
gi|209862782 hypothetical protein LOC730130 [Homo sapiens] 32 2.0
gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens] 32 2.7
gi|169172040 PREDICTED: hypothetical protein [Homo sapiens] 32 2.7
gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens] 32 2.7
gi|169170042 PREDICTED: hypothetical protein [Homo sapiens] 32 2.7
gi|239509115 PREDICTED: hypothetical protein [Homo sapiens] 32 2.7
gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens] 32 2.7
gi|148806872 lupus brain antigen 1 [Homo sapiens] 32 2.7
gi|239756447 PREDICTED: hypothetical protein [Homo sapiens] 32 3.5
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 32 3.5
gi|239750950 PREDICTED: hypothetical protein XP_002347615 [Homo ... 32 3.5
gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo sap... 32 3.5
gi|239745356 PREDICTED: hypothetical protein XP_002343445 [Homo ... 32 3.5
>gi|239744229 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 904
Score = 1860 bits (4819), Expect = 0.0
Identities = 904/904 (100%), Positives = 904/904 (100%)
Query: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW
Sbjct: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
Query: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR
Sbjct: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
Query: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR
Sbjct: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
Query: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY
Sbjct: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
Query: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS
Sbjct: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
Query: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA
Sbjct: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
Query: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA
Sbjct: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
Query: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC
Sbjct: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
Query: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR
Sbjct: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
Query: 541 VSFQQPSSGAAQEAMEACPLAPVPSRGPGCPGIFCLVVAAIVITLVSVEKVQRVPLVASS 600
VSFQQPSSGAAQEAMEACPLAPVPSRGPGCPGIFCLVVAAIVITLVSVEKVQRVPLVASS
Sbjct: 541 VSFQQPSSGAAQEAMEACPLAPVPSRGPGCPGIFCLVVAAIVITLVSVEKVQRVPLVASS 600
Query: 601 EITSQPHLLVFLKAALGERSKPLGRKGRSQPYEAFSHGRHEARGHNAKTVATLRLPRTQP 660
EITSQPHLLVFLKAALGERSKPLGRKGRSQPYEAFSHGRHEARGHNAKTVATLRLPRTQP
Sbjct: 601 EITSQPHLLVFLKAALGERSKPLGRKGRSQPYEAFSHGRHEARGHNAKTVATLRLPRTQP 660
Query: 661 VRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRGHSGPSTPATCDGASR 720
VRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRGHSGPSTPATCDGASR
Sbjct: 661 VRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRGHSGPSTPATCDGASR 720
Query: 721 PAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVENRRTSFTVGELFRNDT 780
PAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVENRRTSFTVGELFRNDT
Sbjct: 721 PAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVENRRTSFTVGELFRNDT 780
Query: 781 RVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGSLR 840
RVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGSLR
Sbjct: 781 RVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGSLR 840
Query: 841 SCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTPPHKGFGFGIPYLQGL 900
SCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTPPHKGFGFGIPYLQGL
Sbjct: 841 SCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTPPHKGFGFGIPYLQGL 900
Query: 901 GFGE 904
GFGE
Sbjct: 901 GFGE 904
>gi|169201839 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 915
Score = 1571 bits (4068), Expect = 0.0
Identities = 799/934 (85%), Positives = 811/934 (86%), Gaps = 49/934 (5%)
Query: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW
Sbjct: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
Query: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR
Sbjct: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
Query: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR
Sbjct: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
Query: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY
Sbjct: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
Query: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS
Sbjct: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
Query: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA
Sbjct: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
Query: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA
Sbjct: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
Query: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC
Sbjct: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
Query: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR
Sbjct: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
Query: 541 VSFQQPSSGAAQEAMEACPLAPVPSRGPGCPGIFCLVVAAIVITLVSVEKVQ--RVPLVA 598
VSFQQPSSGAAQEAMEACPLAP A + + + + Q R L
Sbjct: 541 VSFQQPSSGAAQEAMEACPLAP----------------NAKTVATLRLPRTQPVRAALKL 584
Query: 599 SSEITSQPHLLVFLKAALGERSKPLGR--KGRSQPYEAFSHGRHEARGHNAKTVATLRLP 656
SS + L L+ R P GR +G P + S R A T T P
Sbjct: 585 SSFLAQGCTPLTALQCG---RECPCGRLCRGLKAPQKLHSLSRSPGLPQPAWTSITQVPP 641
Query: 657 RTQPVRAALKLSSF-------------------LAQGCTPLTALQ-------CGRECPCG 690
R Q L++S L P LQ G P
Sbjct: 642 RLQWSHRGLQVSVLRETVPHLGPAFAEAPQIGNLWPVAQPQELLQPPHLQNRDGSGRPHE 701
Query: 691 RLCRGLAAEHKYSRGHSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLA 750
+ R AAEHKYSRGHSGP TPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLA
Sbjct: 702 AIPRFQAAEHKYSRGHSGPITPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLA 761
Query: 751 KEAGRKEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRV 810
KEAGRKEGRPED+ENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRV
Sbjct: 762 KEAGRKEGRPEDIENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRV 821
Query: 811 TGSSGQSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFS 870
TGSSGQSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFS
Sbjct: 822 TGSSGQSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFS 881
Query: 871 QDQMCQQVTRTSPTPPHKGFGFGIPYLQGLGFGE 904
QDQMCQQVTRTSPTPPHKGFGFGIPYLQGLGFGE
Sbjct: 882 QDQMCQQVTRTSPTPPHKGFGFGIPYLQGLGFGE 915
>gi|169201482 PREDICTED: similar to hCG2038970 [Homo sapiens]
Length = 821
Score = 1166 bits (3017), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW
Sbjct: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFW 60
Query: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR
Sbjct: 61 LSKAAAWGLVARVCEPRVLSNRGHQSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPVR 120
Query: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR
Sbjct: 121 SSGLSSGTGSEGGSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRGPVRTGLIDARR 180
Query: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY
Sbjct: 181 FPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKY 240
Query: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS
Sbjct: 241 KTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVS 300
Query: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA
Sbjct: 301 LNAFTDVAVSPDLAYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTPLERA 360
Query: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA
Sbjct: 361 GCHTELMDGKVEKLQAVESPWQCGYLGSQARSADVMWSASQIPNTTGGPVRILLSLQGVA 420
Query: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC
Sbjct: 421 YWGVPPRCGLLGCPSKVWPAGVSLQGGHTQHVVCRGHSELNWGNKGLRNCGEKPLSQRTC 480
Query: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR
Sbjct: 481 TVSMLSEPPQGHWRRQPGSGYPRSAGVTAFTLMWKLCRGFPNLGAEEFGVRCMRVTTSSR 540
Query: 541 VSFQQPSSGAAQEAMEACPLAP 562
VSFQQPSSGAAQEAMEACPLAP
Sbjct: 541 VSFQQPSSGAAQEAMEACPLAP 562
Score = 535 bits (1377), Expect = e-151
Identities = 259/259 (100%), Positives = 259/259 (100%)
Query: 646 NAKTVATLRLPRTQPVRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRG 705
NAKTVATLRLPRTQPVRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRG
Sbjct: 563 NAKTVATLRLPRTQPVRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRG 622
Query: 706 HSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVEN 765
HSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVEN
Sbjct: 623 HSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVEN 682
Query: 766 RRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGG 825
RRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGG
Sbjct: 683 RRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGG 742
Query: 826 ASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTP 885
ASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTP
Sbjct: 743 ASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTP 802
Query: 886 PHKGFGFGIPYLQGLGFGE 904
PHKGFGFGIPYLQGLGFGE
Sbjct: 803 PHKGFGFGIPYLQGLGFGE 821
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 41.2 bits (95), Expect = 0.004
Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 4/232 (1%)
Query: 592 QRVPLVASSEITSQPHLLVFLKAALGERSKPLGRKGRSQPYEAFSHGRHEARGHNAKTVA 651
+R P V+S E + ++A R+K R+GRS + R +R KT
Sbjct: 1725 RRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRT 1784
Query: 652 TLRLPRTQPVRAALKLSSFLAQGCTPLTALQCGRECPCGRLCRGLAAEHKYSRGHSGPS- 710
T R R+ ++ + ++ + +T + G R + SR G S
Sbjct: 1785 TRRRDRSGSSQSTSRRRQ-RSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843
Query: 711 TPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVENRRTSF 770
TP T SR PW R +++P + + R L R R V +RR S
Sbjct: 1844 TPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRR-RSRSRTSPV-SRRRSR 1901
Query: 771 TVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPI 822
+ + R +R R S +R + R P R T +S PP+
Sbjct: 1902 SRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPV 1953
>gi|42821110 hypothetical protein LOC340602 [Homo sapiens]
Length = 503
Score = 38.1 bits (87), Expect = 0.037
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 21/141 (14%)
Query: 704 RGHSGPSTPAT--CDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEG--- 758
RG + PA CD A PA R SAP+S R + GR
Sbjct: 269 RGRASVPGPARRGCDSAPGPA-------RRGRDSAPVSAPRGRDSAPGSARRGRDSAPGP 321
Query: 759 ------RPEDVENRRTSFTVGELFRN-DTRVRGSAFTRSKLRWHL-QPPALGCPVQRQRV 810
D +R TS T G R+ T+ R + +R L + P+ G +R
Sbjct: 322 ALRVRTARSDAGHRSTSTTPGTGLRSRSTQQRSALLSRRSLSGSADENPSCGTGSERLAF 381
Query: 811 TGSSGQSPDPPIPGGASGPLW 831
SG SPDP +P AS P+W
Sbjct: 382 QSRSG-SPDPEVPSRASPPVW 401
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 37.7 bits (86), Expect = 0.049
Identities = 45/178 (25%), Positives = 63/178 (35%), Gaps = 17/178 (9%)
Query: 710 STPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLAKEAGRKEGRPEDVENRRTS 769
S+P T DG S +P S S PL+ L +V++ EA P D T+
Sbjct: 1965 SSPTTADGTS------MPTPAYSEGSTPLTSMPLSTTLVVSSEASTLSTTPVDTSTPATT 2018
Query: 770 FTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQS-PDPPIPGGASG 828
T G + G ++ P G PV V S G + P+
Sbjct: 2019 STEGS---SSPTTAGGTSIQTSTPSERTTPLAGMPVSTTLVVSSEGNTLSTTPVDSKT-- 2073
Query: 829 PLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQMCQQVTRTSPTPP 886
Q S S A A G ++++S A E + LL S S + T T P
Sbjct: 2074 ---QVTNSTEASSSATAEGSSMTIS--APSEGSPLLTSIPLSTTPVASPEASTLSTTP 2126
>gi|239754520 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 2 [Homo sapiens]
Length = 136
Score = 35.8 bits (81), Expect = 0.18
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 779 DTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGS 838
+TR A + KL+ + Q +LG P +R +SG SP+ GG P G
Sbjct: 4 ETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG--- 60
Query: 839 LRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQM 874
+ + TL ++ E A++L+S S Q+
Sbjct: 61 IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQL 96
>gi|239749081 PREDICTED: hypothetical protein XP_002346905 [Homo
sapiens]
Length = 136
Score = 35.8 bits (81), Expect = 0.18
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 779 DTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGS 838
+TR A + KL+ + Q +LG P +R +SG SP+ GG P G
Sbjct: 4 ETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG--- 60
Query: 839 LRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQM 874
+ + TL ++ E A++L+S S Q+
Sbjct: 61 IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQL 96
>gi|239508762 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 2 [Homo sapiens]
Length = 136
Score = 35.8 bits (81), Expect = 0.18
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Query: 779 DTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGS 838
+TR A + KL+ + Q +LG P +R +SG SP+ GG P G
Sbjct: 4 ETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG--- 60
Query: 839 LRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQM 874
+ + TL ++ E A++L+S S Q+
Sbjct: 61 IHGEGPTSSATLKDLESPCQELAVVLDSRSIKISQL 96
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 34.3 bits (77), Expect = 0.54
Identities = 54/207 (26%), Positives = 76/207 (36%), Gaps = 33/207 (15%)
Query: 118 PVRSSGLSSGTGSEG--------GSWGHMTAASEGRAPRIQVSSWWQGTCPSKPSKGFRG 169
P S+G G+ G +WG AS R P+ P R
Sbjct: 59 PAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAG---------PAGPP--CRA 107
Query: 170 PVRTGLIDARRFPLTAAAAGLKPAGPCTAP-RTSSAEADMKSQHAGRLEPLCLQAAAPFV 228
P R RR P A G PAG A T+++ A +S A RL P C +
Sbjct: 108 PGRGRAAATRRSPAPGTARG-SPAGVERAGGATAASSAGTRSVPARRLPPPCGGTSLGAG 166
Query: 229 KIQREREGTKKYKTIFQIKRNVETRKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTC 288
R G+ + R+ + + ++ G P P A P T +P+G V++ P
Sbjct: 167 SRALRRPGSAA------LPRSPSSSRRWAAMPGPGAPRPGA-PGT--WPVGFAVAAPPAA 217
Query: 289 IPRVLWPPPVVS---LNAFTDVAVSPD 312
V PPP V+ AF +PD
Sbjct: 218 AASVAPPPPAVAGAPAAAFRGWVAAPD 244
>gi|224493723 hypothetical protein LOC100130311 [Homo sapiens]
Length = 190
Score = 33.9 bits (76), Expect = 0.70
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 796 LQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSL 852
L+ AL + +R+ GS+G +PD PG A + Q AG G +R AA G + L
Sbjct: 91 LEISALWLQQEARRLDGSAGPAPDGRDPGAALSRVAQAAGQG-VRQAGAAVGASARL 146
>gi|239743107 PREDICTED: hypothetical protein XP_002342738 [Homo
sapiens]
Length = 136
Score = 33.9 bits (76), Expect = 0.70
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 779 DTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSGQSPDPPIPGGASGPLWQRAGSGS 838
+TR A + KL+ + Q +LG P +R +SG SP+ GG P G
Sbjct: 4 ETRQSKLAIAKEKLKEYWQRNSLGVPAGVKRNRKTSGSSPETATSGGCHSPEDSATG--- 60
Query: 839 LRSCAAAAGCTLSLSKAAAPEQALLLESTSFSQDQM 874
+ + TL ++ E A++L+ S Q+
Sbjct: 61 IHGEGPTSSATLKDLESPCQELAVVLDPRSIKISQL 96
>gi|27734915 hypothetical protein LOC170393 [Homo sapiens]
Length = 145
Score = 33.9 bits (76), Expect = 0.70
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 1 MGLLGPQHPSVDPGSQRPQVPHAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQ 55
+ L PQHPS P S RP+ PH++ P LA + D A AG + L EQ
Sbjct: 79 LSLRQPQHPSA-PASGRPRPPHSSGPD-LAEAAPVVDQASQAAGRASSGLGLWEQ 131
>gi|41152076 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 33.1 bits (74), Expect = 1.2
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 692 LCRGLAAEHKYSRG-HSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLA 750
+C H RG H G P +SRPA+ L R + +S + R L P +
Sbjct: 18 VCGSEPHPHATIRGSHGGRKVPLVSPDSSRPARFL----RHTGRSRGIERSTLEEPNLQP 73
Query: 751 KEAGRKEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRV 810
+ RR S V L R S + +R +P A G P + R
Sbjct: 74 LQ-------------RRRSVPVLRLARPTEPPARSDINGAAVRPEQRPAARGSPREMIRD 120
Query: 811 TGSSGQSPDPPIPGGASGP 829
GSS +S P G+S P
Sbjct: 121 EGSSARSRMLRFPSGSSSP 139
>gi|41152074 steroid-sensitive protein 1 [Homo sapiens]
Length = 950
Score = 33.1 bits (74), Expect = 1.2
Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 18/139 (12%)
Query: 692 LCRGLAAEHKYSRG-HSGPSTPATCDGASRPAQHLLPWDRLSFKSAPLSRKHLRGPVVLA 750
+C H RG H G P +SRPA+ L R + +S + R L P +
Sbjct: 18 VCGSEPHPHATIRGSHGGRKVPLVSPDSSRPARFL----RHTGRSRGIERSTLEEPNLQP 73
Query: 751 KEAGRKEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRV 810
+ RR S V L R S + +R +P A G P + R
Sbjct: 74 LQ-------------RRRSVPVLRLARPTEPPARSDINGAAVRPEQRPAARGSPREMIRD 120
Query: 811 TGSSGQSPDPPIPGGASGP 829
GSS +S P G+S P
Sbjct: 121 EGSSARSRMLRFPSGSSSP 139
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 32.3 bits (72), Expect = 2.0
Identities = 56/246 (22%), Positives = 90/246 (36%), Gaps = 54/246 (21%)
Query: 6 PQHPSVDPGSQRPQVP--HAASPSGLAGCLVIFDVAEVMAGHQARLSPLHEQNRSFWLSK 63
P+H ++ PGS+R H +AG L + E + H+ + ++ L+K
Sbjct: 6882 PEHGALAPGSRRHPARRRHLLKGGYIAGALP--GLREPLMEHRVLEEEAAREEQATLLAK 6939
Query: 64 AAAWGLVARVCEPRVLSNRGH----QSRRPLQPHLDRQACTLQAGCLRCLGPMNDGSLPV 119
A ++ R+ GH + P P +AC G + L G P+
Sbjct: 6940 APSFETALRLPASGTHLAPGHSHSLEHDSPSTPRPSSEAC----GEAQRLPSAPSGGAPI 6995
Query: 120 RSSGLSSG------TGSEGGS-----------WGHM---------TAASEGRAPRIQVS- 152
R G G TG G+ WG +A EG +P V+
Sbjct: 6996 RDMGHPQGSKQLPSTGGHPGTAQPERPSPDSPWGQPAPFCHPKQGSAPQEGCSPHPAVAP 7055
Query: 153 ----SWWQGTC---PSKPSKGFRG-------PVRTGL-IDARRFPLTAAAAGLKPAGPCT 197
S+ G+C P PS F G P + +D++ P + G GPC+
Sbjct: 7056 CPPGSFPPGSCKEAPLVPSSPFLGQPQAPPAPAKASPPLDSKMGPGDISLPGRPKPGPCS 7115
Query: 198 APRTSS 203
+P ++S
Sbjct: 7116 SPGSAS 7121
>gi|223718207 ets variant gene 3 isoform 1 [Homo sapiens]
Length = 512
Score = 32.3 bits (72), Expect = 2.0
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 10/144 (6%)
Query: 193 AGPCTAPRTSSAEADMKSQHAGRLEPLCLQAAAPFVKIQREREGTKKYKTIFQIKRNVET 252
+ P T P +S +K + A +P L+ +A + + EGT +TI + K +
Sbjct: 365 SAPVTTPTMASIPPRIKVEPASEKDPESLRQSAREKEEHTQEEGTVPSRTIEEEKGTIFA 424
Query: 253 RKLCSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPR-------VLWPPPVVSLNAFT 305
R +A + P P++ PS + + +P P L PP + +
Sbjct: 425 R---PAAPPIWPSVPISTPSGEPLEVTEDSEDRPGKEPSAPEKKEDALMPPKLRLKRRWN 481
Query: 306 DVAVSPDLAYKDRTALGATSPPGL 329
D + +L+ + + P GL
Sbjct: 482 DDPEARELSKSGKFLWNGSGPQGL 505
>gi|209862782 hypothetical protein LOC730130 [Homo sapiens]
Length = 380
Score = 32.3 bits (72), Expect = 2.0
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 13/96 (13%)
Query: 810 VTGSSGQSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALLLES--- 866
+ GS S P GGA+ G GS AAAGC LS A AP ++ L +
Sbjct: 1 MAGSDVDSEGPARRGGAARRPGAPGGPGS----EAAAGCPEPLSTAEAPAESATLPAWMR 56
Query: 867 ------TSFSQDQMCQQVTRTSPTPPHKGFGFGIPY 896
+ D + R + +P + GF PY
Sbjct: 57 LYFYGMHGITLDVLVSSARRFARSPDLRMLGFSSPY 92
>gi|169211572 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 32.0 bits (71), Expect = 2.7
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 808 QRVTGSSGQSPD----PPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALL 863
Q V G G++P PP+P + P W+ G G L +C A +L L A
Sbjct: 95 QAVPGRCGRAPQAPGGPPLP--SCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPAC 152
Query: 864 LESTSFSQDQ 873
S+S++ Q
Sbjct: 153 FPSSSWALPQ 162
>gi|169172040 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.0 bits (71), Expect = 2.7
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 756 KEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSG 815
++G PE V R T G L +R ++ W P CP R R G +G
Sbjct: 46 RDGIPEAVAPRETR--TGGLRGESWGLRKASVPELGTCWGEARPRR-CP--RPRCPGRTG 100
Query: 816 QSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGC----TLSLSKAAAPEQALLLESTSFSQ 871
+PG SGP W+R R A A G L L + A + S F Q
Sbjct: 101 L-----VPGVLSGPRWRRVPDSRARGAAPAPGSPALNRLILHSGDSNGHAFIYSSPPFRQ 155
Query: 872 D 872
D
Sbjct: 156 D 156
>gi|169211191 PREDICTED: similar to hCG1816473 [Homo sapiens]
Length = 256
Score = 32.0 bits (71), Expect = 2.7
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 808 QRVTGSSGQSPD----PPIPGGASGPLWQRAGSGSLRSCAAAAGCTLSLSKAAAPEQALL 863
Q V G G++P PP+P + P W+ G G L +C A +L L A
Sbjct: 95 QAVPGRCGRAPQAPGGPPLP--SCHPSWESPGQGGLEACPTCAQGSLWLPSAGLCSLPAC 152
Query: 864 LESTSFSQDQ 873
S+S++ Q
Sbjct: 153 FPSSSWALPQ 162
>gi|169170042 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.0 bits (71), Expect = 2.7
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 756 KEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSG 815
++G PE V R T G L +R ++ W P CP R R G +G
Sbjct: 46 RDGIPEAVAPRETR--TGGLRGESWGLRKASVPELGTCWGEARPRR-CP--RPRCPGRTG 100
Query: 816 QSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGC----TLSLSKAAAPEQALLLESTSFSQ 871
+PG SGP W+R R A A G L L + A + S F Q
Sbjct: 101 L-----VPGVLSGPRWRRVPDSRARGAAPAPGSPALNRLILHSGDSNGHAFIYSSPPFRQ 155
Query: 872 D 872
D
Sbjct: 156 D 156
>gi|239509115 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 32.0 bits (71), Expect = 2.7
Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 756 KEGRPEDVENRRTSFTVGELFRNDTRVRGSAFTRSKLRWHLQPPALGCPVQRQRVTGSSG 815
++G PE V R T G L +R ++ W P CP R R G +G
Sbjct: 46 RDGIPEAVAPRETR--TGGLRGESWGLRKASVPELGTCWGEARPRR-CP--RPRCPGRTG 100
Query: 816 QSPDPPIPGGASGPLWQRAGSGSLRSCAAAAGC----TLSLSKAAAPEQALLLESTSFSQ 871
+PG SGP W+R R A A G L L + A + S F Q
Sbjct: 101 L-----VPGVLSGPRWRRVPDSRARGAAPAPGSPALNRLILHSGDSNGHAFIYSSPPFRQ 155
Query: 872 D 872
D
Sbjct: 156 D 156
>gi|115387099 brain-specific angiogenesis inhibitor 2 [Homo sapiens]
Length = 1585
Score = 32.0 bits (71), Expect = 2.7
Identities = 15/24 (62%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 403 PNTTGGPVR-ILLSLQGVAYWGVP 425
PN +G R LLS QGVAYWG+P
Sbjct: 559 PNASGSASRRCLLSAQGVAYWGLP 582
>gi|148806872 lupus brain antigen 1 [Homo sapiens]
Length = 2375
Score = 32.0 bits (71), Expect = 2.7
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 176 IDARRFPLTAAAAGLKPAGPCTAPRTSSAEADMKSQHAGRL-----EPLCLQAAAPFVKI 230
ID + + A AG++PAG A + E + +H ++ LC + F+++
Sbjct: 559 IDEQEYEACAGGAGVEPAGDGQAAEVCAPEHPHQLEHLHQIFVTKNHVLCQEVQRNFIEL 618
Query: 231 QREREGTKKYKTI 243
+ + T YK +
Sbjct: 619 SKSTKATSHYKPL 631
>gi|239756447 PREDICTED: hypothetical protein [Homo sapiens]
Length = 155
Score = 31.6 bits (70), Expect = 3.5
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448
D W + + GP +++L+ G WG C L CPS P G SL
Sbjct: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94
Query: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498
TQ V+ S G LR C P + R +++ +S+ +GHW + PG
Sbjct: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 3.5
Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Query: 256 CSSALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWPPPVVSLNAFTDVAVSPDLAY 315
C + L P P + P L V+ +P P + PP A AV P A
Sbjct: 68 CGNTRNLYPLTPWSAPVVVPSALTRAVAWRPAAAPAAV-RPPAAGPPAAAPAAVCPAAAD 126
Query: 316 KDRTALGATSPPGLICRLLTLAVHAPVA 343
+L A SPP + + AV P A
Sbjct: 127 PSAASLCAASPPAAVPAAVPAAVRPPAA 154
>gi|239750950 PREDICTED: hypothetical protein XP_002347615 [Homo
sapiens]
Length = 155
Score = 31.6 bits (70), Expect = 3.5
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448
D W + + GP +++L+ G WG C L CPS P G SL
Sbjct: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94
Query: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498
TQ V+ S G LR C P + R +++ +S+ +GHW + PG
Sbjct: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140
>gi|239745807 PREDICTED: keratin associated protein 4-9 [Homo
sapiens]
Length = 254
Score = 31.6 bits (70), Expect = 3.5
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 258 SALALGPPHPVAFPSTSLFPLGTEVSSKPTCIPRVLWP----PPVVSLNAFTDVAVSPDL 313
SA +L +P+ ++ P V+ P P V+ P P SL A +AV+P
Sbjct: 47 SAASLCAANPLVPAPAAVRP---PVAGPPATAPAVVCPAAAGPSAASLRAANPLAVAPAA 103
Query: 314 AYKDRTALGATSPPGLICRLLTLAVHAPVAVTMGGGASSDFTP 356
+ LGA SP + + A +P A ++ + + P
Sbjct: 104 VRRPAATLGAASPAAVAPAAVCPAAASPSAASLCAASPTAAAP 146
>gi|239745356 PREDICTED: hypothetical protein XP_002343445 [Homo
sapiens]
Length = 155
Score = 31.6 bits (70), Expect = 3.5
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 394 DVMWSASQIPNTTGGPVRILLSL-QGVAYWGVP--PRCGLLGCPSKVWPAGVSLQGGH-- 448
D W + + GP +++L+ G WG C L CPS P G SL
Sbjct: 38 DHQWLKQTLALLSSGPAQLVLAACSGPQRWGAAFGSLCELGLCPS---PHGASLPSTALT 94
Query: 449 -TQHVVCRGHSELNWGNKGLRNCGEKPLSQRTCTVSMLSEPPQGHWRRQPG 498
TQ V+ S G LR C P + R +++ +S+ +GHW + PG
Sbjct: 95 LTQLVLAARSST---GAYALRLCTGPP-APRPASLACVSDCAEGHWEK-PG 140
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,525,137
Number of Sequences: 37866
Number of extensions: 2179314
Number of successful extensions: 8079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 8010
Number of HSP's gapped (non-prelim): 112
length of query: 904
length of database: 18,247,518
effective HSP length: 111
effective length of query: 793
effective length of database: 14,044,392
effective search space: 11137202856
effective search space used: 11137202856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.