CCDC80 27649

Name: CCDC80	Sequence: fasta or formatted (950aa)		NCBI GI: 41152076
Description: steroid-sensitive protein 1		Referenced in: Coiled-Coil Proteins Additional Interaction Domain Families
Other entries for this name: alt mRNA [950aa] steroid-sensitive protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 53 2 C cysteine 0.7 7 1 D aspartate 4.6 44 2 E glutamate 7.7 73 2 F phenylalanine 2.7 26 2 G glycine 6.1 58 4 H histidine 2.3 22 2 I isoleucine 3.8 36 1 K lysine 8.5 81 4 L leucine 7.7 73 3 M methionine 3.1 29 2 N asparagine 2.7 26 2 P proline 8.0 76 2 Q glutamine 4.7 45 2 R arginine 8.6 82 3 S serine 7.9 75 3 T threonine 5.1 48 3 V valine 6.0 57 2 W tryptophan 0.8 8 1 Y tyrosine 3.3 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 steroid-sensitive protein 1 CCDC80 1.000 steroid-sensitive protein 1 SRPX2 0.024 sushi-repeat-containing protein, X-linked 2 SRPX 0.024 sushi-repeat-containing protein, X-linked SRRM1 0.023 serine/arginine repetitive matrix 1 MAP7D1 0.018 MAP7 domain containing 1 NES 0.017 nestin MAP1B 0.017 microtubule-associated protein 1B MUC2 0.017 mucin 2 precursor RBBP6 0.017 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.017 retinoblastoma-binding protein 6 isoform 1 MUC7 0.016 mucin 7, secreted precursor MUC7 0.016 mucin 7, secreted precursor MUC7 0.016 mucin 7, secreted precursor NEFH 0.016 neurofilament, heavy polypeptide 200kDa USP8 0.016 ubiquitin specific peptidase 8 USP8 0.016 ubiquitin specific peptidase 8 USP8 0.016 ubiquitin specific peptidase 8 MAP1A 0.015 microtubule-associated protein 1A LOC284297 0.015 hypothetical protein LOC284297 LOC100294364 0.015 PREDICTED: hypothetical protein MAP7 0.015 microtubule-associated protein 7 LOC100294088 0.014 PREDICTED: hypothetical protein, partial PPIG 0.014 peptidylprolyl isomerase G CHAF1A 0.014 chromatin assembly factor 1, subunit A (p150) FNDC1 0.014 fibronectin type III domain containing 1 TRDN 0.014 triadin MUC6 0.014 mucin 6, gastric CWC22 0.014 CWC22 spliceosome-associated protein homolog AP3D1 0.014 adaptor-related protein complex 3, delta 1 subunit ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.