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Search of human proteins with 239743136
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743136 PREDICTED: hypothetical protein XP_002342759 [Homo
sapiens]
(413 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754542 PREDICTED: hypothetical protein [Homo sapiens] 838 0.0
gi|239749107 PREDICTED: hypothetical protein XP_002346912 [Homo ... 838 0.0
gi|239743136 PREDICTED: hypothetical protein XP_002342759 [Homo ... 838 0.0
gi|239508794 PREDICTED: hypothetical protein [Homo sapiens] 838 0.0
gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens] 37 0.033
gi|66529407 tensin [Homo sapiens] 33 0.36
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 33 0.47
gi|112421108 capicua homolog [Homo sapiens] 32 1.4
gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 31 2.3
gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 31 2.3
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 30 4.0
gi|124028521 hematopoietic transcription factor PU.1 isoform 1 [... 30 4.0
gi|124028517 hematopoietic transcription factor PU.1 isoform 2 [... 30 4.0
gi|122937193 DNB5 [Homo sapiens] 30 4.0
gi|54792138 helicase with zinc finger domain [Homo sapiens] 30 4.0
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 30 5.2
gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens] 30 5.2
gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform ... 30 5.2
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens] 30 5.2
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 30 5.2
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 30 5.2
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 30 5.2
gi|45545409 F-box protein 38 isoform b [Homo sapiens] 30 5.2
gi|20357552 cortactin isoform a [Homo sapiens] 29 6.8
gi|20357556 cortactin isoform b [Homo sapiens] 29 6.8
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 29 6.8
gi|150378447 zinc and ring finger 3 [Homo sapiens] 29 6.8
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 29 6.8
gi|46409282 OTU domain containing 6A [Homo sapiens] 29 6.8
gi|7657575 sirtuin 1 isoform a [Homo sapiens] 29 8.9
>gi|239754542 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 838 bits (2164), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ
Sbjct: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
Query: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT
Sbjct: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
Query: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS
Sbjct: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
Query: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK
Sbjct: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
Query: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY
Sbjct: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
Query: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG
Sbjct: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
Query: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP
Sbjct: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
>gi|239749107 PREDICTED: hypothetical protein XP_002346912 [Homo
sapiens]
Length = 413
Score = 838 bits (2164), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ
Sbjct: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
Query: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT
Sbjct: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
Query: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS
Sbjct: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
Query: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK
Sbjct: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
Query: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY
Sbjct: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
Query: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG
Sbjct: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
Query: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP
Sbjct: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
>gi|239743136 PREDICTED: hypothetical protein XP_002342759 [Homo
sapiens]
Length = 413
Score = 838 bits (2164), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ
Sbjct: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
Query: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT
Sbjct: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
Query: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS
Sbjct: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
Query: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK
Sbjct: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
Query: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY
Sbjct: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
Query: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG
Sbjct: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
Query: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP
Sbjct: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
>gi|239508794 PREDICTED: hypothetical protein [Homo sapiens]
Length = 413
Score = 838 bits (2164), Expect = 0.0
Identities = 413/413 (100%), Positives = 413/413 (100%)
Query: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ
Sbjct: 1 MPYQAEELILLVWMEVQTRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQ 60
Query: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT
Sbjct: 61 VVGDGPQQGHGPPALSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSERCPTFIMTVT 120
Query: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS
Sbjct: 121 NVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCS 180
Query: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK
Sbjct: 181 SLEALGMPRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSK 240
Query: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY
Sbjct: 241 GSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLEPHSGTHLTVEQTEKLMKVGILY 300
Query: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG
Sbjct: 301 EQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHG 360
Query: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP
Sbjct: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTADLHPPP 413
>gi|41327767 ADP-ribosylation factor-like 4D [Homo sapiens]
Length = 201
Score = 37.0 bits (84), Expect = 0.033
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 279 PH-SGTHLTVEQTEKLMKVGILYEQAFIFWLLRQQGVDARSFSTGSIKEP---GRGGVFQ 334
PH H+ V + K +LY F ++ Q V + F+T I+ P RG FQ
Sbjct: 17 PHFQALHVVVIGLDSAGKTSLLYRLKFKEFV---QSVPTKGFNTEKIRVPLGGSRGITFQ 73
Query: 335 AWP-RGLERKRAHWQASTERADG 356
W G E+ R W++ T R DG
Sbjct: 74 VWDVGGQEKLRPLWRSYTRRTDG 96
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 33.5 bits (75), Expect = 0.36
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 205 ESSGPVPTIDRAGTEFDMAAKHLQSQSTPQAQARSKGSVSALMNEKQKPHLQGSELRTEK 264
+SS P+PT+ + + D + +H S+P++QAR++ SV+ + P + + T
Sbjct: 1132 QSSSPLPTVGSSYSSPDYSLQHF--SSSPESQARAQFSVAGVHTVPGSPQARHRTVGTNT 1189
Query: 265 LLSEGLGRR 273
S G G R
Sbjct: 1190 PPSPGFGWR 1198
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 33.1 bits (74), Expect = 0.47
Identities = 31/106 (29%), Positives = 42/106 (39%), Gaps = 12/106 (11%)
Query: 316 ARSFSTGSIKEPGR-------GGVFQAWPRGLERKRAHWQASTERADGQAHGIPPRPSLL 368
AR GS +EPGR G F R+ HWQ + E A+G A P
Sbjct: 875 ARGRKPGSRREPGRLALKWGTRGGFNGQMERSPRRTHHWQHNGELAEGGAEPKDPP---- 930
Query: 369 PSSTASQDLPSHACVVH-SKPTISRPFSPCHKTYAASTTADLHPPP 413
P S+DL VV S+ R ++P + ++ L P P
Sbjct: 931 PPGPHSEDLKVPPGVVRKSRRGRRRKYNPTRNSNSSRQDITLEPSP 976
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 31.6 bits (70), Expect = 1.4
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 154 QDSARKARCLYLSFRMRQRTSCSTDCSSLEALGMPRAYRLPSSFERVPCQTESS---GPV 210
Q A R + S+R +++ S D + + R R SS P +S+ G +
Sbjct: 1377 QSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDI 1436
Query: 211 PTIDRAGTEFDMAAKHLQSQSTPQAQAR 238
T DR GTE + L+ P + R
Sbjct: 1437 FTFDRTGTEAEDVLGELEYDKVPYSSLR 1464
>gi|209862881 pre-mRNA cleavage factor I, 59 kDa subunit isoform 2
[Homo sapiens]
Length = 471
Score = 30.8 bits (68), Expect = 2.3
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 337 PRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQDLPSHACVVHSKPTISRPF-- 394
PRG RAH + S++ ADG+A P +L+PSS A D P ++P + P
Sbjct: 181 PRGGIPPRAHSRDSSDSADGRA---TPSENLVPSS-ARVDKPPSVLPYFNRPPSALPLMG 236
Query: 395 ---SPCHKTYAASTTADLHPPP 413
P S++ + PPP
Sbjct: 237 LPPPPIPPPPPLSSSFGVPPPP 258
>gi|217035102 pre-mRNA cleavage factor I, 59 kDa subunit isoform 1
[Homo sapiens]
Length = 514
Score = 30.8 bits (68), Expect = 2.3
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 337 PRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQDLPSHACVVHSKPTISRPF-- 394
PRG RAH + S++ ADG+A P +L+PSS A D P ++P + P
Sbjct: 224 PRGGIPPRAHSRDSSDSADGRA---TPSENLVPSS-ARVDKPPSVLPYFNRPPSALPLMG 279
Query: 395 ---SPCHKTYAASTTADLHPPP 413
P S++ + PPP
Sbjct: 280 LPPPPIPPPPPLSSSFGVPPPP 301
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 30.0 bits (66), Expect = 4.0
Identities = 36/139 (25%), Positives = 47/139 (33%), Gaps = 32/139 (23%)
Query: 123 WESSISVQRLSRCVSSSASSSCEC--------CSCERVAQDSARKARCLYLSFRMRQRTS 174
W+SS + S S ++S+SC C CSC+ S C S R S
Sbjct: 250 WQSSRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSS---TSCSCQSSRTSSTCS 306
Query: 175 C------STDCSSLEALGMPRAYRLPSSFERVPCQTESSGPVPT---IDRAGTEFDMAAK 225
C ST CS SS C +SSG T +GT +
Sbjct: 307 CQFSRTSSTSCS------------CQSSRTSSTCSCQSSGTSSTSCICWSSGTSSTSCSG 354
Query: 226 HLQSQSTPQAQARSKGSVS 244
S+ RS G+ S
Sbjct: 355 RFSGTSSTSCNCRSSGTSS 373
>gi|124028521 hematopoietic transcription factor PU.1 isoform 1
[Homo sapiens]
Length = 271
Score = 30.0 bits (66), Expect = 4.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 335 AWPRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQ 375
A P E + E +DG+A G+ P P LLP T S+
Sbjct: 128 AQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSK 168
>gi|124028517 hematopoietic transcription factor PU.1 isoform 2
[Homo sapiens]
Length = 270
Score = 30.0 bits (66), Expect = 4.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 335 AWPRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQ 375
A P E + E +DG+A G+ P P LLP T S+
Sbjct: 127 AQPSSDEEEGERQSPPLEVSDGEADGLEPGPGLLPGETGSK 167
>gi|122937193 DNB5 [Homo sapiens]
Length = 748
Score = 30.0 bits (66), Expect = 4.0
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 361 IPPRPSLLPSSTASQDLPSHACVVHSKPTISRPFSPCHKTYAASTTAD 408
+PP P +LP LPSH S P IS P SP Y + + D
Sbjct: 310 LPPSPPVLPEEGPGDSLPSHTATNFSSP-ISPP-SPLTPKYGSFISRD 355
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 30.0 bits (66), Expect = 4.0
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 66 PQQGHGPPA---LSCQHHQHLPQLIGAKVLHQLQALTLSSRRFISGSE---RCPTFIMTV 119
P H PP + Q+HQH IG + H L + T+SS S E R P +
Sbjct: 1703 PPLPHRPPQNPFVQIQNHQHA---IGQEPFHPLSSRTVSSSSLPSLEEYEPRGPGRPLYQ 1759
Query: 120 TNVWESSISVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDC 179
+ SS SVQ S VS+ S +C + QD + ++ + S T+ ST
Sbjct: 1760 RRI--SSSSVQPCSEEVSTPQDSLAQC----KELQDHSNQSSFNFSSPESWVNTTSSTPY 1813
Query: 180 SSLEALGMPR 189
++ G R
Sbjct: 1814 QNIPCNGSSR 1823
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 29.6 bits (65), Expect = 5.2
Identities = 36/139 (25%), Positives = 47/139 (33%), Gaps = 32/139 (23%)
Query: 123 WESSISVQRLSRCVSSSASSSCEC--------CSCERVAQDSARKARCLYLSFRMRQRTS 174
W+SS + S S ++S+SC C CSC+ S C S R S
Sbjct: 250 WQSSRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSS---TSCSCQSSRTSSTCS 306
Query: 175 C------STDCSSLEALGMPRAYRLPSSFERVPCQTESSGPVPT---IDRAGTEFDMAAK 225
C ST CS SS C +SSG T +GT +
Sbjct: 307 CQFSRTSSTSCS------------CQSSRTSSTCSCQSSGTSSTSCICWSSGTSSTSCSG 354
Query: 226 HLQSQSTPQAQARSKGSVS 244
S+ RS G+ S
Sbjct: 355 RFSGTSSTSCNCRSSGTSS 373
>gi|5902122 spectrin, beta, non-erythrocytic 2 [Homo sapiens]
Length = 2390
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 215 RAGTEFDMAAKHLQSQSTPQAQARSKGSVSALMNEKQKPHLQGSELRTEKLLSEGLGRRE 274
R G E ++ K L+ Q R A M E Q+ H+ G E ++L ++ ++
Sbjct: 1572 RLGHELELRGKRLEDALRAQQFYRDAAEAEAWMGE-QELHMMGQEKAKDELSAQAEVKKH 1630
Query: 275 KVLE 278
+VLE
Sbjct: 1631 QVLE 1634
>gi|217035107 pre-mRNA cleavage factor I, 59 kDa subunit isoform 3
[Homo sapiens]
Length = 462
Score = 29.6 bits (65), Expect = 5.2
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 308 LLRQQGVDARSFSTGSIKEPGRGGVFQAWPRGLERKRAHWQASTERADGQAHGIPPRPSL 367
+L + VD R + ++ + F+A R RAH + S++ ADG+A P +L
Sbjct: 149 VLNGEKVDVRPATRQNLSQ------FEAQARKRIPPRAHSRDSSDSADGRA---TPSENL 199
Query: 368 LPSSTASQDLPSHACVVHSKPTISRPF-----SPCHKTYAASTTADLHPPP 413
+PSS A D P ++P + P P S++ + PPP
Sbjct: 200 VPSS-ARVDKPPSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVPPPP 249
>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
Length = 753
Score = 29.6 bits (65), Expect = 5.2
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
Query: 128 SVQRLSRCVSSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCSSLEALGM 187
SVQ++ V E C C+ +DSA++ +R CS S
Sbjct: 613 SVQQIGLSVPVIIIKQEEACQCQCACRDSAKER-------ASSRRKGCS---SPPPPEPS 662
Query: 188 PRAYRLPSSFERVPCQTESSGPVPTIDRAGTEFDM-AAKHLQSQSTPQAQARSKGSVSAL 246
P+A PS ++P QT SS PVP + ++ ++ S PQ + S VS
Sbjct: 663 PQAPDGPSL--QLPAQTFSSAPVPGSSSSTLPSSCEQSRQAETPSDPQTETLSAMDVSEF 720
Query: 247 MN 248
++
Sbjct: 721 LS 722
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 334 QAWPRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQDLPSHACVVHSKPTISRP 393
+ WP+G RK HW ++ G+ G ++P ST ACV+ +P +S P
Sbjct: 1150 KGWPKGKSRKPIHW----KKRPGRKPGFKLSREIMPVST-------QACVI--EPIVSIP 1196
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 334 QAWPRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQDLPSHACVVHSKPTISRP 393
+ WP+G RK HW ++ G+ G ++P ST ACV+ +P +S P
Sbjct: 1150 KGWPKGKSRKPIHW----KKRPGRKPGFKLSREIMPVST-------QACVI--EPIVSIP 1196
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 29.6 bits (65), Expect = 5.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 334 QAWPRGLERKRAHWQASTERADGQAHGIPPRPSLLPSSTASQDLPSHACVVHSKPTISRP 393
+ WP+G RK HW ++ G+ G ++P ST ACV+ +P +S P
Sbjct: 1150 KGWPKGKSRKPIHW----KKRPGRKPGFKLSREIMPVST-------QACVI--EPIVSIP 1196
>gi|45545409 F-box protein 38 isoform b [Homo sapiens]
Length = 1188
Score = 29.6 bits (65), Expect = 5.2
Identities = 36/156 (23%), Positives = 55/156 (35%), Gaps = 27/156 (17%)
Query: 97 ALTLSSRRFISGSERCPTFIMTVTNVWESS-----ISVQRLSRCVSSSA----------- 140
A T+ + + + + P F+ TV + S + V R C +
Sbjct: 709 ASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDA 768
Query: 141 -SSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCSSLEALGMPRAYRLPSSFER 199
SS C C C R + R +RC +R S S C + P R SF
Sbjct: 769 ESSVCPRCCCHRPQESQRRTSRC-----SDEERPSTSRAC----VVNGPDGTRSAFSFRT 819
Query: 200 VPCQTESSGPVPTIDRAGTEFDMAAKHLQSQSTPQA 235
+P Q SSGP G+ + + S P++
Sbjct: 820 LP-QGGSSGPAHDERTNGSGSGATGEDRRGSSQPES 854
>gi|20357552 cortactin isoform a [Homo sapiens]
Length = 550
Score = 29.3 bits (64), Expect = 6.8
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 18 TRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQVVGDGPQQGHG 71
+ K Q++ A+ QG Q+ + I ++E++F++ + L + + GP+ HG
Sbjct: 33 SEKEQRWGAKTVQGS---GHQEHINIHKLRENVFQEHQTLKEKELETGPKASHG 83
>gi|20357556 cortactin isoform b [Homo sapiens]
Length = 513
Score = 29.3 bits (64), Expect = 6.8
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 18 TRKSQKYAAQVGQGDVLRSVQDVLGIGHVQEHIFRQREGLLHQVVGDGPQQGHG 71
+ K Q++ A+ QG Q+ + I ++E++F++ + L + + GP+ HG
Sbjct: 33 SEKEQRWGAKTVQGS---GHQEHINIHKLRENVFQEHQTLKEKELETGPKASHG 83
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 29.3 bits (64), Expect = 6.8
Identities = 32/136 (23%), Positives = 52/136 (38%), Gaps = 10/136 (7%)
Query: 219 EFDMAAKHLQSQSTPQAQARSKGSVSALMNEKQKPHLQGSELRTEKLLSEGLGRREKVLE 278
E + A + LQ A S + + + L + R + + E R +K+ +
Sbjct: 841 ECEKARQELQEAKEKVAGIESHSELQISRQQNELAELHANLARALQQVQEKEVRAQKLAD 900
Query: 279 PHSGTHLTVEQTEKLMKVGILYEQAFIFWLLRQQGVDARSFSTGSIKEPGRGGVFQAWPR 338
S + T K E A + L+R+ G + S +KEP R G Q P
Sbjct: 901 DLSTLQEKMAATSK--------EVARLETLVRKAGEQQETASRELVKEPARAGDRQ--PE 950
Query: 339 GLERKRAHWQASTERA 354
LE ++ ST+ A
Sbjct: 951 WLEEQQGRQFCSTQAA 966
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 29.3 bits (64), Expect = 6.8
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 13/72 (18%)
Query: 137 SSSASSSCECCSCERVAQDSARKARCLYLSFRMRQRTSCSTDCSSLEALGMPRAYRLPSS 196
SSS+S C C S + V + + +Y SCST SSL + P YR
Sbjct: 453 SSSSSGQCHCSSSDSVVDCTEVSNQGVY--------GSCSTFRSSLSSDYDPFIYR---- 500
Query: 197 FERVPCQTESSG 208
R PC+ +G
Sbjct: 501 -SRSPCRASEAG 511
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 29.3 bits (64), Expect = 6.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 360 GIPPRPSLLPSSTASQDLPSHA--CVVHSKPTISRPFSPCHKTYAASTTADL--HPPP 413
G PP P LLP++ A+ P+ A C V + P PC ++ ST+ L PPP
Sbjct: 157 GSPPHPHLLPTTPAA-PFPAQASECPVAAATAPHTP-GPCQSSHLPSTSMPLLKMPPP 212
>gi|46409282 OTU domain containing 6A [Homo sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 6.8
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 214 DRAGTEFDMAAKHLQSQSTPQAQARSKGSVSAL--MN-EKQKPHLQGSELRTEKLLSEGL 270
D A E +MA KH Q Q + + V L MN E + P + + E++ SE
Sbjct: 47 DVARMEAEMAQKHRQELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERMESEER 106
Query: 271 GRREKVLEPHSGTHLT---VEQTEKLMKV 296
R+E + + HL E+ EKL +
Sbjct: 107 ERQESIFQAEMSEHLAGFKREEEEKLAAI 135
>gi|7657575 sirtuin 1 isoform a [Homo sapiens]
Length = 747
Score = 28.9 bits (63), Expect = 8.9
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 9/114 (7%)
Query: 51 FRQREGLLHQVVGDGPQQGHGPPALSCQHHQHLPQLIG--AKVLHQLQALTLSSRRFISG 108
FR R+G+ ++ D P ++ + P+ AK ++ Q +FI+
Sbjct: 273 FRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDPRPFFKFAKEIYPGQFQPSLCHKFIAL 332
Query: 109 SERCPTFIMTVT---NVWESSISVQRLSRCVSSSASSSCECC----SCERVAQD 155
S++ + T + E +QR+ +C S A++SC C CE V D
Sbjct: 333 SDKEGKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLICKYKVDCEAVRGD 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.130 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,199,528
Number of Sequences: 37866
Number of extensions: 815659
Number of successful extensions: 2884
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 2850
Number of HSP's gapped (non-prelim): 66
length of query: 413
length of database: 18,247,518
effective HSP length: 105
effective length of query: 308
effective length of database: 14,271,588
effective search space: 4395649104
effective search space used: 4395649104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.