Guide to the Human Genome
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Name: CTTN Sequence: fasta or formatted (513aa) NCBI GI: 20357556
Description:

cortactin isoform b

Referenced in:

Actin and Related Proteins
Rho and Rac
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [550aa] cortactin isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         45           2
 C cysteine            0.6          3           1
 D aspartate           8.2         42           2
 E glutamate           9.9         51           2
 F phenylalanine       3.5         18           1
 G glycine             9.4         48           2
 H histidine           2.7         14           1
 I isoleucine          2.1         11           2
 K lysine              9.0         46           1
 L leucine             3.1         16           1
 M methionine          1.4          7           1
 N asparagine          1.9         10           1
 P proline             3.3         17           2
 Q glutamine           7.2         37           2
 R arginine            4.7         24           2
 S serine              7.4         38           2
 T threonine           4.1         21           1
 V valine              6.4         33           1
 W tryptophan          1.2          6           2
 Y tyrosine            5.1         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cortactin isoform b 
CTTN                  0.982   cortactin isoform a 
HCLS1                 0.380   hematopoietic cell-specific Lyn substrate 1 
DBNL                  0.076   drebrin-like isoform b 
DBNL                  0.075   drebrin-like isoform a 
DBNL                  0.073   drebrin-like isoform c 
LASP1                 0.040   LIM and SH3 protein 1 
NEB                   0.038   nebulin 
PACSIN1               0.036   protein kinase C and casein kinase substrate in neur...
SH3D19                0.035   SH3 domain containing 19 isoform c 
SH3D19                0.035   SH3 domain containing 19 isoform b 
SH3D19                0.035   SH3 domain containing 19 isoform a 
SH3KBP1               0.034   SH3-domain kinase binding protein 1 isoform a 
ABI2                  0.034   abl interactor 2 
NEBL                  0.033   nebulette sarcomeric isoform 
NEBL                  0.033   nebulette non-muscle isoform 
ITSN1                 0.032   intersectin 1 isoform ITSN-s 
ITSN1                 0.032   intersectin 1 isoform ITSN-l 
ABI1                  0.032   abl-interactor 1 isoform d 
ABI1                  0.032   abl-interactor 1 isoform c 
ABI1                  0.032   abl-interactor 1 isoform b 
ABI1                  0.032   abl-interactor 1 isoform a 
NCK1                  0.029   NCK adaptor protein 1 
SPTAN1                0.029   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
SPTAN1                0.029   spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) ...
NCK2                  0.029   NCK adaptor protein 2 isoform A 
NCK2                  0.029   NCK adaptor protein 2 isoform A 
STAM                  0.029   signal transducing adaptor molecule 1 
KIAA1804              0.029   mixed lineage kinase 4 
MYO1E                 0.029   myosin IE 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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