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Search of human proteins with 239743045
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743045 PREDICTED: hypothetical protein XP_002342699 [Homo
sapiens]
(139 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754472 PREDICTED: hypothetical protein [Homo sapiens] 278 1e-75
gi|239749029 PREDICTED: hypothetical protein [Homo sapiens] 278 1e-75
gi|239743045 PREDICTED: hypothetical protein XP_002342699 [Homo ... 278 1e-75
gi|239751929 PREDICTED: hypothetical protein [Homo sapiens] 40 5e-04
gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo ... 40 5e-04
gi|148236531 hypothetical protein LOC339779 [Homo sapiens] 33 0.057
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 33 0.075
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens] 33 0.075
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 33 0.075
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens] 33 0.075
gi|169212085 PREDICTED: similar to poly(A) binding protein inter... 33 0.098
gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo ... 32 0.13
gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo ... 32 0.17
gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens] 32 0.17
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 32 0.17
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 32 0.17
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 32 0.22
gi|169194607 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|239753002 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|169201944 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|169192119 PREDICTED: hypothetical protein [Homo sapiens] 31 0.28
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|169208084 PREDICTED: hypothetical protein [Homo sapiens] 31 0.37
gi|9966841 cell death regulator aven [Homo sapiens] 31 0.37
gi|239756307 PREDICTED: similar to ubiquitin-associated protein ... 30 0.48
gi|169166960 PREDICTED: hypothetical protein [Homo sapiens] 30 0.48
gi|239752553 PREDICTED: similar to poly(A) binding protein inter... 30 0.48
gi|169216125 PREDICTED: hypothetical protein [Homo sapiens] 30 0.48
gi|239750857 PREDICTED: similar to ubiquitin-associated protein ... 30 0.48
>gi|239754472 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 278 bits (711), Expect = 1e-75
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI
Sbjct: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
Query: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF
Sbjct: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
Query: 121 REHSGLRSPVSQQRSASFR 139
REHSGLRSPVSQQRSASFR
Sbjct: 121 REHSGLRSPVSQQRSASFR 139
>gi|239749029 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 278 bits (711), Expect = 1e-75
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI
Sbjct: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
Query: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF
Sbjct: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
Query: 121 REHSGLRSPVSQQRSASFR 139
REHSGLRSPVSQQRSASFR
Sbjct: 121 REHSGLRSPVSQQRSASFR 139
>gi|239743045 PREDICTED: hypothetical protein XP_002342699 [Homo
sapiens]
Length = 139
Score = 278 bits (711), Expect = 1e-75
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI
Sbjct: 1 MPEERQLSGDSAAAATFVFLLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLI 60
Query: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF
Sbjct: 61 PKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSF 120
Query: 121 REHSGLRSPVSQQRSASFR 139
REHSGLRSPVSQQRSASFR
Sbjct: 121 REHSGLRSPVSQQRSASFR 139
>gi|239751929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 382
Score = 40.4 bits (93), Expect = 5e-04
Identities = 39/109 (35%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 20 LLPPSPRG--GEGRRLPGFVLSFFAGEG-GGERERERVQRLSLIPK---RAAELPPEPIR 73
L PP R GE +R G FAG G GG R R RL + RA P R
Sbjct: 155 LSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRR 214
Query: 74 -----KPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPC-GSRPGVTRR 116
+ + P GQRR L+ A A RGG C G RPG+ +R
Sbjct: 215 GEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKR 263
>gi|239746415 PREDICTED: hypothetical protein XP_002344217 [Homo
sapiens]
Length = 382
Score = 40.4 bits (93), Expect = 5e-04
Identities = 39/109 (35%), Positives = 46/109 (42%), Gaps = 12/109 (11%)
Query: 20 LLPPSPRG--GEGRRLPGFVLSFFAGEG-GGERERERVQRLSLIPK---RAAELPPEPIR 73
L PP R GE +R G FAG G GG R R RL + RA P R
Sbjct: 155 LSPPLRRAASGEWKRPGGLTQGEFAGRGAGGARVTHRPGRLRPRGRGRGRARRTCPARRR 214
Query: 74 -----KPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPC-GSRPGVTRR 116
+ + P GQRR L+ A A RGG C G RPG+ +R
Sbjct: 215 GEEDLRVQDSCPQAGCRAMGQRRVLKAEGARARARGGVCFGPRPGMQKR 263
>gi|148236531 hypothetical protein LOC339779 [Homo sapiens]
Length = 412
Score = 33.5 bits (75), Expect = 0.057
Identities = 35/111 (31%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 23 PSPRGGEGRRLPGF--VLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNP 80
P PR G RL F +L G+ G L L +A L P ++P+ P
Sbjct: 264 PLPRYRTGPRLLAFPQLLPCVQGQESGPLRIGIGFGLRLPQGQARALHLLPEKRPKEAGP 323
Query: 81 TGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSPVS 131
GKA + + AA R P PG + RSFR +GL+SP S
Sbjct: 324 QGKATQACGHQLPASQPPAAQARADPV---PGTPSQTRSFRS-AGLQSPNS 370
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 33.1 bits (74), Expect = 0.075
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 22/116 (18%)
Query: 43 GEGG--GERERERVQRLSLIPKRAAELPPEPIRKPRS-----GNPTGKAIIRGQ------ 89
G GG R +R SL P+R+ P P R PR G P + +R
Sbjct: 184 GRGGRPARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDWMREDGVGAGG 243
Query: 90 -----RRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLR--SPVSQQRSASF 138
R LR R A + V GP R G R RR+ R L+ P S +R+ F
Sbjct: 244 GPQEPRFPLRRREARSAVVAGP--RREGSARSRRAARRRRQLQPGPPASAERARMF 297
>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.075
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 26 RGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAI 85
RGGE +L GF AG G G + + L+ R + PR
Sbjct: 468 RGGEVAQLEGFPFMLRAG-GRGAPGLQAEELGGLLGCRTGWAAGRTLAGPR--------- 517
Query: 86 IRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRR 118
+R L GR AGVRGG CG G R R
Sbjct: 518 VRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGR 550
Score = 31.6 bits (70), Expect = 0.22
Identities = 42/143 (29%), Positives = 51/143 (35%), Gaps = 38/143 (26%)
Query: 25 PRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPK--RAAEL-PPEPIRKPRSGNPT 81
P GG G G G+G G R V+R S P RAA L PP P +G+PT
Sbjct: 618 PLGGAGGGGSG------EGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671
Query: 82 G----------------------------KAIIRGQRRALRGRSAAAGVRG-GPCGSRPG 112
++ RG R+ R + A+ VR P G
Sbjct: 672 SPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEAS 731
Query: 113 VTRRRRSFREHSGLRSPVSQQRS 135
R R SF SG SP RS
Sbjct: 732 SPRARGSFLPKSGGGSPPRPARS 754
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 33.1 bits (74), Expect = 0.075
Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 22/116 (18%)
Query: 43 GEGG--GERERERVQRLSLIPKRAAELPPEPIRKPRS-----GNPTGKAIIRGQ------ 89
G GG R +R SL P+R+ P P R PR G P + +R
Sbjct: 176 GRGGRPARRTTQRAASSSLPPRRSEGHPDAPHRSPRPLYRWLGPPPRRDWMREDGVGAGG 235
Query: 90 -----RRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLR--SPVSQQRSASF 138
R LR R A + V GP R G R RR+ R L+ P S +R+ F
Sbjct: 236 GPQEPRFPLRRREARSAVVAGP--RREGSARSRRAARRRRQLQPGPPASAERARMF 289
>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
Length = 837
Score = 33.1 bits (74), Expect = 0.075
Identities = 30/93 (32%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 26 RGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAI 85
RGGE +L GF AG G G + + L+ R + PR
Sbjct: 468 RGGEVAQLEGFPFMLRAG-GRGAPGLQAEELGGLLGCRTGWAAGRTLAGPR--------- 517
Query: 86 IRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRR 118
+R L GR AGVRGG CG G R R
Sbjct: 518 VRLGLEQLLGRHVGAGVRGGACGPHRGGIRGGR 550
Score = 31.6 bits (70), Expect = 0.22
Identities = 42/143 (29%), Positives = 51/143 (35%), Gaps = 38/143 (26%)
Query: 25 PRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPK--RAAEL-PPEPIRKPRSGNPT 81
P GG G G G+G G R V+R S P RAA L PP P +G+PT
Sbjct: 618 PLGGAGGGGSG------EGQGRGPGSRVSVRRSSRAPSSCRAASLAPPRPASATSAGSPT 671
Query: 82 G----------------------------KAIIRGQRRALRGRSAAAGVRG-GPCGSRPG 112
++ RG R+ R + A+ VR P G
Sbjct: 672 SPAPPLHMVSTDGCSAAFLVLDSARKGDRRSARRGGPRSWRPSARASWVRSTTPRGPEAS 731
Query: 113 VTRRRRSFREHSGLRSPVSQQRS 135
R R SF SG SP RS
Sbjct: 732 SPRARGSFLPKSGGGSPPRPARS 754
>gi|169212085 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 516
Score = 32.7 bits (73), Expect = 0.098
Identities = 33/113 (29%), Positives = 44/113 (38%), Gaps = 24/113 (21%)
Query: 25 PRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKA 84
PRGG+ P G G ER R + + PK L P P+R+PR+ P G
Sbjct: 60 PRGGQDSGGPN-------GAGPAERARHQPPQ----PKAPGFLQPPPLRQPRTTPPPG-- 106
Query: 85 IIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSPVSQQRSAS 137
+ A+ R P G+ P T RS R + + QQ S S
Sbjct: 107 --------AQCEVPASPQRPSPPGALPEQT---RSLRAPPSSQDKIPQQNSES 148
>gi|239750123 PREDICTED: hypothetical protein XP_002347295 [Homo
sapiens]
Length = 194
Score = 32.3 bits (72), Expect = 0.13
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 90 RRALRGRSAAAGVRGGPCGSRPGV-----TRRRRSFREHSGLRSP 129
RR RG S G RGG CG+ PG+ RR S R +G P
Sbjct: 70 RRRRRGLSLGGGARGGACGAGPGLPAPTWVRRPWSSRLSAGTAPP 114
>gi|239754110 PREDICTED: hypothetical protein XP_002345881 [Homo
sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 0.17
Identities = 35/130 (26%), Positives = 46/130 (35%), Gaps = 15/130 (11%)
Query: 22 PPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIP------------KRAAELPP 69
PP+P R G L G G ER+ + L I + AA LP
Sbjct: 87 PPAPAPAPRERARGLRLRTVVGVAGVLVERDDLHALLAIQVIVQLLCAAAEARGAATLPA 146
Query: 70 EPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSP 129
P G R GRS+A G GG G +RR R E G R+
Sbjct: 147 AAATTTALDGPGAGG---GAERGGSGRSSAGGGGGGGGGGGGRGSRRGRGGGERGGPRAQ 203
Query: 130 VSQQRSASFR 139
++R ++ R
Sbjct: 204 AVRRRLSALR 213
>gi|124494251 BCL2-associated athanogene isoform 1L [Homo sapiens]
Length = 345
Score = 32.0 bits (71), Expect = 0.17
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 47 GERERERVQRLSLIPKRAAELPPEPIRK--PRSGNPTGKAIIRGQRRALRGRSAAAGVRG 104
G+RER + +L P R P ++ P SG P ++ G R RG AAAG R
Sbjct: 12 GDRERLGSRLRALRPGREPRQSEPPAQRGPPPSGRPPARSTASGHDRPTRG--AAAGAR- 68
Query: 105 GPCGSRPGVTR--RRRSFREHSGLRS 128
RP + + RRRS R RS
Sbjct: 69 -----RPRMKKKTRRRSTRSEELTRS 89
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 32.0 bits (71), Expect = 0.17
Identities = 36/124 (29%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 22 PPSPRGGEGRRLPG---FVLSFFAGEGGGERERERVQRLSLIPKR---AAELPPEPIRKP 75
PP+P GE +P ++ A ER + L + R A ELPP P+
Sbjct: 31 PPTPPPGEPAPVPAAPRYLPPLPASPETPERAAGPSEPLGEVAPRCRGADELPPPPLPLQ 90
Query: 76 RSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGV--TRRRRSFREHSGLRSPVSQQ 133
+G A G+ R AA +GGP S G R RR + RS S +
Sbjct: 91 PAGQEVAAAGDSGE--GPRRLPEAAAAKGGPGESEAGAGGERERRGAGDQPETRSVCSSR 148
Query: 134 RSAS 137
S+S
Sbjct: 149 SSSS 152
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 32.0 bits (71), Expect = 0.17
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 65 AELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVR---GGPCGSRPGVTRRRRS 119
A L EP+ P +G + +A+I G+RR R+A AG R G G+ G RR RS
Sbjct: 293 AALASEPLPDPGTGTASPRAVIGGRRRR---RTALAGTRTAQGSGGGAGRGHGRRGRS 347
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 31.6 bits (70), Expect = 0.22
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 64 AAELPPEPIRKPRSG--------NPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTR 115
A+ L PEP R P S +P ++ G+ RGR G+RG +RP R
Sbjct: 819 ASALEPEPARPPLSALAPPHGSPDPPVPELLTGRGSGKRGRRGGGGLRGINGEARPARGR 878
Query: 116 RRRSFRE 122
+ S RE
Sbjct: 879 KPGSRRE 885
>gi|169194607 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 0.28
Identities = 27/99 (27%), Positives = 36/99 (36%)
Query: 20 LLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGN 79
LL P R RR P +L+ GGG R R + + + L P P R+ R+G
Sbjct: 199 LLAPRSRCDIPRRAPHRLLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQ 258
Query: 80 PTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRR 118
+A G G G G P + RR
Sbjct: 259 THRRARTEVAGNVHVGHPGREGAAGEGAGRDPESSADRR 297
>gi|239753002 PREDICTED: hypothetical protein [Homo sapiens]
Length = 141
Score = 31.2 bits (69), Expect = 0.28
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 70 EPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRSP 129
E R+ + G++ +G+ RS GV GG G P RRR ++E + P
Sbjct: 70 EEWRRAKRKREIGRSDKKGEDFECNSRSFGLGVPGGGIGIAPLRGRRRVDWQEAAKRHQP 129
Query: 130 VSQQ 133
VSQ+
Sbjct: 130 VSQK 133
Score = 30.0 bits (66), Expect = 0.63
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 56 RLSLIPKRAAELPPEPIRKPRSGNPTG-----KAIIRGQRRALRGRSAAAGVRGGPCGSR 110
RLS +P RA PP P+++ S + G + ++R A RG++ G+ GG G R
Sbjct: 8 RLSSLPLRA---PPYPLQESPSVHGEGLQRRGEGVLRVTLYA-RGKTGVEGLLGGTVGGR 63
Query: 111 PGVT-----RRRRSFRE 122
GV+ RR + RE
Sbjct: 64 GGVSGGEEWRRAKRKRE 80
>gi|169201944 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 0.28
Identities = 27/99 (27%), Positives = 36/99 (36%)
Query: 20 LLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGN 79
LL P R RR P +L+ GGG R R + + + L P P R+ R+G
Sbjct: 199 LLAPRSRCDIPRRAPHRLLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQ 258
Query: 80 PTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRR 118
+A G G G G P + RR
Sbjct: 259 THRRARTEVAGNVHVGHPGREGAAGEGAGRDPESSADRR 297
>gi|169192119 PREDICTED: hypothetical protein [Homo sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 0.28
Identities = 27/99 (27%), Positives = 36/99 (36%)
Query: 20 LLPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGN 79
LL P R RR P +L+ GGG R R + + + L P P R+ R+G
Sbjct: 199 LLAPRSRCDIPRRAPHRLLAGGRAAGGGRRVGSRRRATVTRARPSRSLAPPPRRRRRAGQ 258
Query: 80 PTGKAIIRGQRRALRGRSAAAGVRGGPCGSRPGVTRRRR 118
+A G G G G P + RR
Sbjct: 259 THRRARTEVAGNVHVGHPGREGAAGEGAGRDPESSADRR 297
>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 30.8 bits (68), Expect = 0.37
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 50 ERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGS 109
+R+ QRL +R PP+ G P RR G A G GGPCG+
Sbjct: 21 QRDGKQRL----RRTGRAPPQSPPPAGPGAPGAP-----WRRGDEGPGPAGGEAGGPCGA 71
Query: 110 RPG 112
PG
Sbjct: 72 APG 74
>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 30.8 bits (68), Expect = 0.37
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 50 ERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGS 109
+R+ QRL +R PP+ G P RR G A G GGPCG+
Sbjct: 21 QRDGKQRL----RRTGRAPPQSPPPAGPGAPGAP-----WRRGDEGPGPAGGEAGGPCGA 71
Query: 110 RPG 112
PG
Sbjct: 72 APG 74
>gi|169208084 PREDICTED: hypothetical protein [Homo sapiens]
Length = 266
Score = 30.8 bits (68), Expect = 0.37
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 50 ERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRGGPCGS 109
+R+ QRL +R PP+ G P RR G A G GGPCG+
Sbjct: 21 QRDGKQRL----RRTGRAPPQSPPPAGPGAPGAP-----WRRGDEGPGPAGGEAGGPCGA 71
Query: 110 RPG 112
PG
Sbjct: 72 APG 74
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 30.8 bits (68), Expect = 0.37
Identities = 27/85 (31%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 26 RGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAI 85
RGG GRR PG G GG+R ER + + + G G
Sbjct: 8 RGGRGRR-PG------RGRPGGDRHSERPGAAAAVARGGGG---------GGGGDGGGRR 51
Query: 86 IRGQRRALRGRSAAAGVRGGPCGSR 110
RG+ R RG G G P GSR
Sbjct: 52 GRGRGRGFRGARGGRGGGGAPRGSR 76
>gi|239756307 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 0.48
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 3 EERQLSGDSAAAATFVFLLPPSPRG-GEGRRLPGF-VLSFFAGEGGGERERERVQRLSLI 60
+E + S S L P SP G GRRL VL E G R R +L
Sbjct: 111 DEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSR 170
Query: 61 PK---------RAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAG 101
P+ RA L P P + PRS +P G A A R + AG
Sbjct: 171 PRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAG 220
>gi|169166960 PREDICTED: hypothetical protein [Homo sapiens]
Length = 216
Score = 30.4 bits (67), Expect = 0.48
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 17/94 (18%)
Query: 46 GGERERERVQRLSLIPKRAAELPPEPIRKPRSGN-----------PTGKAIIRGQRRALR 94
GG RE ER QR + + A LPP P+R RS P + RG ++
Sbjct: 98 GGLREPER-QRQEVSYRHRATLPPHPLRSRRSAPTLGARPRRPTWPPRAQLKRGDQQPPP 156
Query: 95 GRSAAAGVRGGPCGSRPGVTRRRRSFREHSGLRS 128
S A+ P G+R TRRR + E S L+S
Sbjct: 157 TPSPAS----QPRGARRARTRRRTN-EESSRLQS 185
>gi|239752553 PREDICTED: similar to poly(A) binding protein
interacting protein 1 [Homo sapiens]
Length = 457
Score = 30.4 bits (67), Expect = 0.48
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 15/93 (16%)
Query: 45 GGGERERERVQRLSLIPKRAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAGVRG 104
G G ER R Q PK L P P+R+PR+ P G + A+ R
Sbjct: 12 GAGPAERARHQPPQ--PKAPGFLQPPPLRQPRTTPPPG----------AQCEVPASPQRP 59
Query: 105 GPCGSRPGVTRRRRSFREHSGLRSPVSQQRSAS 137
P G+ P T RS R + + QQ S S
Sbjct: 60 SPPGALPEQT---RSLRAPPSSQDKIPQQNSES 89
>gi|169216125 PREDICTED: hypothetical protein [Homo sapiens]
Length = 309
Score = 30.4 bits (67), Expect = 0.48
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 31/114 (27%)
Query: 21 LPPSPRGGEGRRLPGFVLSFFAGEGGGERERERVQRLSLIPKR----AAELP-------- 68
+PP+PR +P S ++G +E + ++ KR A LP
Sbjct: 113 IPPTPRSPRRESVPQHPWSLYSGLTVSSQELDLCFCTNITEKRLQTPGARLPHHRRCASE 172
Query: 69 ----------PEPIRKPR----SGNPTG-----KAIIRGQRRALRGRSAAAGVR 103
P P R PR SG PT + ++RG+RR +GR G R
Sbjct: 173 HNLFLPIHPPPPPPRAPRHAGRSGLPTAHRPGRQGLVRGRRRTSKGRPCIPGWR 226
>gi|239750857 PREDICTED: similar to ubiquitin-associated protein 1
(predicted) [Homo sapiens]
Length = 290
Score = 30.4 bits (67), Expect = 0.48
Identities = 35/110 (31%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 3 EERQLSGDSAAAATFVFLLPPSPRG-GEGRRLPGF-VLSFFAGEGGGERERERVQRLSLI 60
+E + S S L P SP G GRRL VL E G R R +L
Sbjct: 111 DEAEASSGSEEEPAPSSLQPGSPASPGPGRRLCSLDVLRGVRLELAGARRRLSEGKLVSR 170
Query: 61 PK---------RAAELPPEPIRKPRSGNPTGKAIIRGQRRALRGRSAAAG 101
P+ RA L P P + PRS +P G A A R + AG
Sbjct: 171 PRALLHGLRGHRALSLCPSPAQSPRSASPPGPAPQHPAAPASPPRPSTAG 220
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,574,483
Number of Sequences: 37866
Number of extensions: 364216
Number of successful extensions: 1764
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 1641
Number of HSP's gapped (non-prelim): 261
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.