LOC729915 17263

Name: LOC729915	Sequence: fasta or formatted (896aa)		NCBI GI: 239742514
Description: PREDICTED: similar to Putative POM121-like protein 1-like		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.2 109 6 C cysteine 1.8 16 1 D aspartate 4.7 42 2 E glutamate 2.9 26 1 F phenylalanine 2.0 18 2 G glycine 6.2 56 2 H histidine 2.7 24 1 I isoleucine 1.5 13 1 K lysine 3.2 29 2 L leucine 7.8 70 2 M methionine 1.2 11 2 N asparagine 1.9 17 1 P proline 10.6 95 3 Q glutamine 4.6 41 2 R arginine 9.2 82 3 S serine 16.4 147 4 T threonine 6.5 58 1 V valine 3.7 33 1 W tryptophan 0.3 3 1 Y tyrosine 0.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Putative POM121-like protein ... LOC100133280 0.934 PREDICTED: similar to Putative POM121-like protein ... LOC100294020 0.277 PREDICTED: similar to POM121-like 1, partial POM121C 0.078 POM121 membrane glycoprotein (rat)-like POM121 0.078 nuclear pore membrane protein 121 LOC100292653 0.065 PREDICTED: similar to hCG1998564 LOC100288540 0.050 PREDICTED: hypothetical protein XP_002342775 POM121L2 0.047 POM121 membrane glycoprotein-like 2 TRIOBP 0.030 TRIO and F-actin binding protein isoform 6 SRRM2 0.030 splicing coactivator subunit SRm300 MUC12 0.029 PREDICTED: mucin 12 C15orf2 0.027 hypothetical protein LOC23742 MUC12 0.025 PREDICTED: mucin 12 FLJ22184 0.025 PREDICTED: hypothetical protein FLJ22184 LOC100133756 0.021 PREDICTED: hypothetical protein, partial LOC100133714 0.021 PREDICTED: similar to Mucin-12, partial MUC12 0.021 PREDICTED: mucin 12, cell surface associated MAP7D1 0.021 MAP7 domain containing 1 MUC4 0.021 mucin 4 isoform a MUC17 0.021 mucin 17 FNDC1 0.020 fibronectin type III domain containing 1 MUC6 0.019 mucin 6, gastric FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 NACA 0.018 nascent polypeptide-associated complex alpha subuni... MBD6 0.018 methyl-CpG binding domain protein 6 FLJ22184 0.017 PREDICTED: hypothetical protein LOC80164 SCAF1 0.015 SR-related CTD-associated factor 1 MED1 0.015 mediator complex subunit 1 SAMD1 0.015 sterile alpha motif domain containing 1 NAV2 0.015 neuron navigator 2 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.