Guide to the Human Genome
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Name: RWDD4A Sequence: fasta or formatted (188aa) NCBI GI: 116256479
Description:

RWD domain containing 4A

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         14           1
 C cysteine            0.0          0           0
 D aspartate           5.3         10           2
 E glutamate          10.1         19           1
 F phenylalanine       3.7          7           2
 G glycine             3.7          7           1
 H histidine           1.6          3           1
 I isoleucine          6.4         12           2
 K lysine              9.6         18           3
 L leucine             6.9         13           1
 M methionine          2.7          5           1
 N asparagine          6.9         13           2
 P proline             4.8          9           2
 Q glutamine           4.3          8           1
 R arginine            2.7          5           1
 S serine             10.1         19           2
 T threonine           6.4         12           1
 V valine              3.2          6           2
 W tryptophan          1.6          3           1
 Y tyrosine            2.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RWD domain containing 4A 
RWDD1                 0.062   RWD domain containing 1 isoform a 
MEPE                  0.023   matrix, extracellular phosphoglycoprotein with ASARM ...
NOL12                 0.023   nucleolar protein 12 
FMNL3                 0.020   formin-like 3 isoform 1 
TRDN                  0.020   triadin 
CNGA1                 0.014   cyclic nucleotide gated channel alpha 1 isoform 1 [...
CNGA1                 0.014   cyclic nucleotide gated channel alpha 1 isoform 2 [H...
TP53TG5               0.014   TP53-target gene 5 protein 
MTDH                  0.011   metadherin 
DNMT1                 0.011   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
MAK                   0.011   male germ cell-associated kinase 
MAP9                  0.011   aster-associated protein 
ZHX1                  0.011   zinc fingers and homeoboxes 1 
ZHX1                  0.011   zinc fingers and homeoboxes 1 
KIF5B                 0.011   kinesin family member 5B 
ICK                   0.011   intestinal cell kinase 
ICK                   0.011   intestinal cell kinase 
RBBP6                 0.011   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.011   retinoblastoma-binding protein 6 isoform 1 
ZC3H18                0.011   zinc finger CCCH-type containing 18 
REV3L                 0.009   DNA polymerase zeta 
PCDHA3                0.009   protocadherin alpha 3 isoform 1 precursor 
PCDHA1                0.009   protocadherin alpha 1 isoform 3 precursor 
PCDHA10               0.009   protocadherin alpha 10 isoform 3 precursor 
PCDHA9                0.009   protocadherin alpha 9 isoform 1 precursor 
PCDHA6                0.009   protocadherin alpha 6 isoform 3 precursor 
PCDHA1                0.009   protocadherin alpha 1 isoform 1 precursor 
PCDHA2                0.009   protocadherin alpha 2 isoform 1 precursor 
PCDHA5                0.009   protocadherin alpha 5 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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