NDC80 31965

Name: NDC80	Sequence: fasta or formatted (642aa)		NCBI GI: 5174457
Description: kinetochore associated 2		Referenced in: Centromere Proteins Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 38 2 C cysteine 1.4 9 1 D aspartate 4.5 29 2 E glutamate 12.8 82 3 F phenylalanine 3.1 20 1 G glycine 4.2 27 2 H histidine 2.0 13 1 I isoleucine 5.0 32 2 K lysine 10.0 64 2 L leucine 11.1 71 2 M methionine 2.2 14 1 N asparagine 5.3 34 2 P proline 2.8 18 1 Q glutamine 5.6 36 2 R arginine 4.5 29 2 S serine 7.3 47 3 T threonine 4.4 28 3 V valine 4.2 27 2 W tryptophan 0.6 4 1 Y tyrosine 3.1 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 kinetochore associated 2 CCDC88A 0.043 coiled-coil domain containing 88A isoform 2 CCDC88A 0.043 coiled-coil domain containing 88A isoform 1 CLIP1 0.041 restin isoform b CLIP1 0.041 restin isoform a MYH13 0.040 myosin, heavy polypeptide 13, skeletal muscle [Homo... GOLGA3 0.040 Golgi autoantigen, golgin subfamily a, 3 MYH7 0.039 myosin, heavy chain 7, cardiac muscle, beta CENPE 0.039 centromere protein E MYH6 0.039 myosin heavy chain 6 MYH3 0.039 myosin, heavy chain 3, skeletal muscle, embryonic [H... CCDC46 0.039 coiled-coil domain containing 46 isoform a SYCP1 0.038 synaptonemal complex protein 1 ANKRD26 0.038 ankyrin repeat domain 26 MYH9 0.037 myosin, heavy polypeptide 9, non-muscle MYH1 0.037 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH2 0.037 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.037 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH4 0.037 myosin, heavy polypeptide 4, skeletal muscle CEP250 0.037 centrosomal protein 2 TPR 0.036 nuclear pore complex-associated protein TPR UACA 0.036 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.036 uveal autoantigen with coiled-coil domains and ankyr... CGN 0.036 cingulin CENPF 0.036 centromere protein F IFT81 0.035 intraflagellar transport 81-like isoform 1 IFT81 0.035 intraflagellar transport 81-like isoform 1 MYH8 0.035 myosin, heavy chain 8, skeletal muscle, perinatal [... RB1CC1 0.035 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.035 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.