Guide to the Human Genome
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Name: WRB Sequence: fasta or formatted (140aa) NCBI GI: 226246630
Description:

tryptophan rich basic protein isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {174aa} tryptophan rich basic protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         14           2
 C cysteine            1.4          2           1
 D aspartate           3.6          5           1
 E glutamate           4.3          6           1
 F phenylalanine       2.9          4           1
 G glycine             2.1          3           2
 H histidine           1.4          2           1
 I isoleucine          7.1         10           1
 K lysine              8.6         12           1
 L leucine             8.6         12           1
 M methionine          5.0          7           2
 N asparagine          2.1          3           1
 P proline             3.6          5           1
 Q glutamine           5.0          7           1
 R arginine            5.7          8           1
 S serine              5.7          8           1
 T threonine           5.0          7           1
 V valine             12.1         17           2
 W tryptophan          2.9          4           1
 Y tyrosine            2.9          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tryptophan rich basic protein isoform 2 
WRB                   1.000   tryptophan rich basic protein isoform 1 
FANCI                 0.032   Fanconi anemia, complementation group I isoform 2 [H...
RASGRF1               0.028   Ras protein-specific guanine nucleotide-releasing fa...
MXRA5                 0.024   adlican 
TAX1BP1               0.020   Tax1 (human T-cell leukemia virus type I) binding p...
TAX1BP1               0.020   Tax1 (human T-cell leukemia virus type I) binding pr...
TMCC2                 0.020   transmembrane and coiled-coil domain family 2 
GOLGA3                0.020   Golgi autoantigen, golgin subfamily a, 3 
TPM3                  0.016   tropomyosin 3 isoform 2 
TPM3                  0.012   tropomyosin 3 isoform 4 
KRT85                 0.012   keratin 85 
KIAA0947              0.012   hypothetical protein LOC23379 
KIF20B                0.012   M-phase phosphoprotein 1 
ANKRD26               0.012   ankyrin repeat domain 26 
CCDC25                0.012   coiled-coil domain containing 25 
CEP164                0.012   centrosomal protein 164kDa 
CALCOCO2              0.012   calcium binding and coiled-coil domain 2 
JAKMIP3               0.008   Janus kinase and microtubule interacting protein 3 ...
BMI1                  0.008   BMI1 polycomb ring finger oncogene 
G6PC2                 0.008   islet-specific glucose-6-phosphatase-related protein...
KIF27                 0.008   kinesin family member 27 
UACA                  0.008   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.008   uveal autoantigen with coiled-coil domains and ankyr...
GOLGA4                0.008   golgi autoantigen, golgin subfamily a, 4 
LRMP                  0.008   lymphoid-restricted membrane protein 
CCDC21                0.008   coiled-coil domain containing 21 
FBXO28                0.004   F-box protein 28 isoform a 
CENPE                 0.004   centromere protein E 
OR1B1                 0.004   olfactory receptor, family 1, subfamily B, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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